Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
IFNA1P01562 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
IFNA1P01562 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
IFNA1P01562 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC12.81□□□□□ -0.36
IFNA1P01562 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC12.81□□□□□ -0.36
IFNA1P01562 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
IFNA1P01562 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
IFNA1P01562 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
IFNA1P01562 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
IFNA1P01562 CD9-202ENST00000382515 1229 ntTSL 5 BASIC12.81□□□□□ -0.36
IFNA1P01562 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
IFNA1P01562 HLA-L-209ENST00000420110 1011 ntBASIC12.81□□□□□ -0.36
IFNA1P01562 AL390955.1-201ENST00000428694 934 ntBASIC12.81□□□□□ -0.36
IFNA1P01562 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC12.81□□□□□ -0.36
IFNA1P01562 SIGLEC30P-201ENST00000455569 941 ntBASIC12.81□□□□□ -0.36
IFNA1P01562 AC020765.3-201ENST00000613051 740 ntBASIC12.81□□□□□ -0.36
IFNA1P01562 AC073592.5-201ENST00000624854 528 ntBASIC12.81□□□□□ -0.36
IFNA1P01562 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
IFNA1P01562 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
IFNA1P01562 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
IFNA1P01562 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC12.81□□□□□ -0.36
IFNA1P01562 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
IFNA1P01562 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
IFNA1P01562 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC12.81□□□□□ -0.36
IFNA1P01562 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
IFNA1P01562 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
IFNA1P01562 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
IFNA1P01562 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
IFNA1P01562 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
IFNA1P01562 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
IFNA1P01562 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
IFNA1P01562 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC12.81□□□□□ -0.36
IFNA1P01562 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
IFNA1P01562 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC12.81□□□□□ -0.36
IFNA1P01562 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
IFNA1P01562 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
IFNA1P01562 AMT-204ENST00000427987 1646 ntTSL 5 BASIC12.8□□□□□ -0.36
IFNA1P01562 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
IFNA1P01562 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
IFNA1P01562 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
IFNA1P01562 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
IFNA1P01562 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
IFNA1P01562 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
IFNA1P01562 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC12.8□□□□□ -0.36
IFNA1P01562 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC12.8□□□□□ -0.36
IFNA1P01562 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
IFNA1P01562 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
IFNA1P01562 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
IFNA1P01562 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
IFNA1P01562 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
IFNA1P01562 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC12.8□□□□□ -0.36
IFNA1P01562 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
IFNA1P01562 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
IFNA1P01562 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
IFNA1P01562 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC12.8□□□□□ -0.36
IFNA1P01562 AL592424.1-201ENST00000563624 1536 ntBASIC12.8□□□□□ -0.36
IFNA1P01562 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
IFNA1P01562 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
IFNA1P01562 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC12.8□□□□□ -0.36
IFNA1P01562 MIR1238-201ENST00000408483 83 ntBASIC12.8□□□□□ -0.36
IFNA1P01562 NABP1-203ENST00000409510 843 ntTSL 5 BASIC12.8□□□□□ -0.36
IFNA1P01562 ECEL1P3-201ENST00000427961 737 ntBASIC12.8□□□□□ -0.36
IFNA1P01562 WDR53-204ENST00000433160 887 ntTSL 5 BASIC12.8□□□□□ -0.36
IFNA1P01562 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
IFNA1P01562 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC12.8□□□□□ -0.36
IFNA1P01562 NUS1P1-201ENST00000446295 882 ntBASIC12.8□□□□□ -0.36
IFNA1P01562 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC12.8□□□□□ -0.36
IFNA1P01562 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
IFNA1P01562 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
IFNA1P01562 SPEG-225ENST00000617028 815 ntTSL 5 BASIC12.8□□□□□ -0.36
IFNA1P01562 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
IFNA1P01562 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.8□□□□□ -0.36
IFNA1P01562 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
IFNA1P01562 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC12.8□□□□□ -0.36
IFNA1P01562 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
IFNA1P01562 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC12.8□□□□□ -0.36
IFNA1P01562 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
IFNA1P01562 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC12.8□□□□□ -0.36
IFNA1P01562 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
IFNA1P01562 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
IFNA1P01562 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
IFNA1P01562 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
IFNA1P01562 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC12.8□□□□□ -0.36
IFNA1P01562 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
IFNA1P01562 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
IFNA1P01562 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC12.8□□□□□ -0.36
IFNA1P01562 AC243591.1-201ENST00000452967 1364 ntBASIC12.8□□□□□ -0.36
IFNA1P01562 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
IFNA1P01562 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
IFNA1P01562 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
IFNA1P01562 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
IFNA1P01562 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
IFNA1P01562 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
IFNA1P01562 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
IFNA1P01562 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
IFNA1P01562 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
IFNA1P01562 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
IFNA1P01562 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
IFNA1P01562 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
IFNA1P01562 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms