RNA–Protein interactions for RNA: ENST00000264718.7

GPN1-201, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-201ENST00000264718 NISCHQ9Y2I1 1504 aa27.12■■□□□ 1.93
GPN1-201ENST00000264718 HRCP23327 699 aa24.89■■□□□ 1.57
GPN1-201ENST00000264718 PELP1Q8IZL8 1130 aaKnown RBP24.66■■□□□ 1.54
GPN1-201ENST00000264718 PCGF6Q9BYE7 350 aa24.08■■□□□ 1.45
GPN1-201ENST00000264718 PPARGC1BQ86YN6 1023 aaKnown RBP24.06■■□□□ 1.44
GPN1-201ENST00000264718 MYO15BQ96JP2 1530 aa23.91■■□□□ 1.42
GPN1-201ENST00000264718 MYT1Q01538 1121 aa23.89■■□□□ 1.42
GPN1-201ENST00000264718 SUPT5HO00267 1087 aaKnown RBP23.86■■□□□ 1.41
GPN1-201ENST00000264718 CCDC180Q9P1Z9 1646 aa23.83■■□□□ 1.4
GPN1-201ENST00000264718 SHROOM4Q9ULL8 1493 aa23.81■■□□□ 1.4
GPN1-201ENST00000264718 DCAF1Q9Y4B6 1507 aa23.78■■□□□ 1.4
GPN1-201ENST00000264718 CHIC1Q5VXU3 224 aa23.73■■□□□ 1.39
GPN1-201ENST00000264718 SCAF1Q9H7N4 1312 aaKnown RBP23.56■■□□□ 1.36
GPN1-201ENST00000264718 ZEB1P37275 1124 aaPredicted RBP23.51■■□□□ 1.35
GPN1-201ENST00000264718 TRIM26Q12899 539 aaPredicted RBP23.45■■□□□ 1.34
GPN1-201ENST00000264718 ZCCHC6Q5VYS8 1495 aaKnown RBP23.16■■□□□ 1.3
GPN1-201ENST00000264718 ABCC9O60706 1549 aa23.08■■□□□ 1.28
GPN1-201ENST00000264718 ACIN1Q9UKV3 1341 aaKnown RBP23.03■■□□□ 1.28
GPN1-201ENST00000264718 LOC105371045A0A1W2PR82 267 aa23.02■■□□□ 1.28
GPN1-201ENST00000264718 NEUROD1Q13562 356 aa22.82■■□□□ 1.24
GPN1-201ENST00000264718 CENPBP07199 599 aaPredicted RBP22.81■■□□□ 1.24
GPN1-201ENST00000264718 GTF3C3Q9Y5Q9 886 aa22.75■■□□□ 1.23
GPN1-201ENST00000264718 DCAF8L2P0C7V8 631 aa22.59■■□□□ 1.21
GPN1-201ENST00000264718 TTBK1Q5TCY1 1321 aaPredicted RBP22.53■■□□□ 1.2
GPN1-201ENST00000264718 DIEXFQ68CQ4 756 aaKnown RBP22.47■■□□□ 1.19
GPN1-201ENST00000264718 NACADO15069 1562 aa22.3■■□□□ 1.16
GPN1-201ENST00000264718 CCER1Q8TC90 406 aaPredicted RBP22.29■■□□□ 1.16
GPN1-201ENST00000264718 RB1CC1Q8TDY2 1594 aa22.25■■□□□ 1.15
GPN1-201ENST00000264718 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.2■■□□□ 1.14
GPN1-201ENST00000264718 TRIM41Q8WV44 630 aa22.19■■□□□ 1.14
GPN1-201ENST00000264718 ZNF316A6NFI3 1004 aaPredicted RBP22.02■■□□□ 1.12
GPN1-201ENST00000264718 FAM9AQ8IZU1 332 aaPredicted RBP21.99■■□□□ 1.11
GPN1-201ENST00000264718 CLSPNQ9HAW4 1339 aa21.97■■□□□ 1.11
GPN1-201ENST00000264718 YTHDC1Q96MU7 727 aaKnown RBP21.94■■□□□ 1.1
GPN1-201ENST00000264718 BCL11AQ9H165 835 aa21.92■■□□□ 1.1
GPN1-201ENST00000264718 SCRIBQ14160 1630 aa21.92■■□□□ 1.1
GPN1-201ENST00000264718 ANP32EQ9BTT0 268 aa21.88■■□□□ 1.09
GPN1-201ENST00000264718 UNC13AQ9UPW8 1703 aa21.86■■□□□ 1.09
GPN1-201ENST00000264718 RSF1Q96T23 1441 aaPredicted RBP21.84■■□□□ 1.09
GPN1-201ENST00000264718 MIER1Q8N108 512 aa21.78■■□□□ 1.08
GPN1-201ENST00000264718 WRNQ14191 1432 aaPredicted RBP eCLIP21.75■■□□□ 1.07
GPN1-201ENST00000264718 EHMT2Q96KQ7 1210 aa21.73■■□□□ 1.07
GPN1-201ENST00000264718 PABPN1Q86U42 306 aaKnown RBP eCLIP21.67■■□□□ 1.06
GPN1-201ENST00000264718 SUPT16HQ9Y5B9 1047 aaKnown RBP21.66■■□□□ 1.06
GPN1-201ENST00000264718 BICRAQ9NZM4 1560 aa21.64■■□□□ 1.06
GPN1-201ENST00000264718 TSHZ2Q9NRE2 1034 aa21.62■■□□□ 1.05
GPN1-201ENST00000264718 CSRNP3Q8WYN3 585 aa21.5■■□□□ 1.03
GPN1-201ENST00000264718 CEP162Q5TB80 1403 aa21.42■■□□□ 1.02
GPN1-201ENST00000264718 TNIKQ9UKE5 1360 aa21.33■■□□□ 1
GPN1-201ENST00000264718 EIF4G1Q04637 1599 aaKnown RBP21.28■■□□□ 1
GPN1-201ENST00000264718 PRKCSHP14314 528 aaPredicted RBP21.16■□□□□ 0.98
GPN1-201ENST00000264718 EEA1Q15075 1411 aa21.16■□□□□ 0.98
GPN1-201ENST00000264718 CECR2Q9BXF3 1484 aa21.14■□□□□ 0.98
GPN1-201ENST00000264718 HNRNPUL2Q1KMD3 747 aaKnown RBP21.12■□□□□ 0.97
GPN1-201ENST00000264718 MROH2BQ7Z745 1585 aa21.11■□□□□ 0.97
GPN1-201ENST00000264718 BAZ1AQ9NRL2 1556 aaPredicted RBP21.1■□□□□ 0.97
GPN1-201ENST00000264718 RBM19Q9Y4C8 960 aaKnown RBP21.09■□□□□ 0.97
GPN1-201ENST00000264718 WIZO95785 1651 aa21.08■□□□□ 0.96
GPN1-201ENST00000264718 CCDC88BA6NC98 1476 aa21.04■□□□□ 0.96
GPN1-201ENST00000264718 GOLGA3Q08378 1498 aa21.04■□□□□ 0.96
GPN1-201ENST00000264718 ERICH6Q7L0X2 663 aa21.03■□□□□ 0.96
GPN1-201ENST00000264718 ABCC8Q09428 1581 aa21.02■□□□□ 0.96
GPN1-201ENST00000264718 MYT1LQ9UL68 1186 aa21.01■□□□□ 0.95
GPN1-201ENST00000264718 UBTFP17480 764 aaKnown RBP20.99■□□□□ 0.95
GPN1-201ENST00000264718 FKBP8Q14318 412 aa20.98■□□□□ 0.95
GPN1-201ENST00000264718 BCANQ96GW7 911 aa20.97■□□□□ 0.95
GPN1-201ENST00000264718 SOGA1O94964 1423 aa20.96■□□□□ 0.95
GPN1-201ENST00000264718 NEFLP07196 543 aa20.95■□□□□ 0.94
GPN1-201ENST00000264718 SMARCA4P51532 1647 aa20.94■□□□□ 0.94
GPN1-201ENST00000264718 DHX57Q6P158 1386 aaKnown RBP20.93■□□□□ 0.94
GPN1-201ENST00000264718 FANCIQ9NVI1 1328 aa20.89■□□□□ 0.94
GPN1-201ENST00000264718 VPS8Q8N3P4 1428 aa20.88■□□□□ 0.93
GPN1-201ENST00000264718 MSH5O43196 834 aa20.85■□□□□ 0.93
GPN1-201ENST00000264718 DNAJC5BQ9UF47 199 aa20.85■□□□□ 0.93
GPN1-201ENST00000264718 CC2D2AQ9P2K1 1620 aa20.85■□□□□ 0.93
GPN1-201ENST00000264718 APLP2Q06481 763 aa20.84■□□□□ 0.93
GPN1-201ENST00000264718 KIF21BO75037 1637 aa20.81■□□□□ 0.92
GPN1-201ENST00000264718 CEP164Q9UPV0 1460 aa20.81■□□□□ 0.92
GPN1-201ENST00000264718 CLIP1P30622 1438 aa20.81■□□□□ 0.92
GPN1-201ENST00000264718 TOP2AP11388 1531 aaKnown RBP20.79■□□□□ 0.92
GPN1-201ENST00000264718 RUSC2Q8N2Y8 1516 aa20.78■□□□□ 0.92
GPN1-201ENST00000264718 KCNH8Q96L42 1107 aa20.75■□□□□ 0.91
GPN1-201ENST00000264718 ATAD2BQ9ULI0 1458 aa20.72■□□□□ 0.91
GPN1-201ENST00000264718 BAZ1BQ9UIG0 1483 aaKnown RBP20.71■□□□□ 0.91
GPN1-201ENST00000264718 SMARCA2P51531 1590 aa20.69■□□□□ 0.9
GPN1-201ENST00000264718 PEG3Q9GZU2 1588 aa20.67■□□□□ 0.9
GPN1-201ENST00000264718 CUX2O14529 1486 aa20.67■□□□□ 0.9
GPN1-201ENST00000264718 ITGAEP38570 1179 aa20.66■□□□□ 0.9
GPN1-201ENST00000264718 CDK11AQ9UQ88 783 aaPredicted RBP20.66■□□□□ 0.9
GPN1-201ENST00000264718 DEKP35659 375 aaKnown RBP20.65■□□□□ 0.9
GPN1-201ENST00000264718 CCER2I3L3R5 266 aa20.63■□□□□ 0.89
GPN1-201ENST00000264718 NCAPD3P42695 1498 aa20.6■□□□□ 0.89
GPN1-201ENST00000264718 ERICH6BQ5W0A0 696 aa20.59■□□□□ 0.89
GPN1-201ENST00000264718 RRBP1Q9P2E9 1410 aaKnown RBP20.55■□□□□ 0.88
GPN1-201ENST00000264718 HMGXB3Q12766 1538 aa20.53■□□□□ 0.88
GPN1-201ENST00000264718 DDX10Q13206 875 aaKnown RBP20.5■□□□□ 0.87
GPN1-201ENST00000264718 PPP1R15AO75807 674 aaPredicted RBP20.48■□□□□ 0.87
GPN1-201ENST00000264718 TRIM52Q96A61 297 aa20.48■□□□□ 0.87
GPN1-201ENST00000264718 ANP32CO43423 234 aa20.47■□□□□ 0.87
GPN1-201ENST00000264718 MAPKBP1O60336 1514 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms