RNA–Protein interactions for RNA: ENST00000372088.6

CCSER2-203, Transcript of coiled-coil serine rich protein 2, humanhuman

TSL 2 BASIC

Gene CCSER2, Length 7,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER2-203ENST00000372088 NISCHQ9Y2I1 1504 aa26■■□□□ 1.75
CCSER2-203ENST00000372088 DCAF8L2P0C7V8 631 aa24.05■■□□□ 1.44
CCSER2-203ENST00000372088 SUPT5HO00267 1087 aaKnown RBP23.52■■□□□ 1.36
CCSER2-203ENST00000372088 SHROOM4Q9ULL8 1493 aa23.23■■□□□ 1.31
CCSER2-203ENST00000372088 TRIM41Q8WV44 630 aa22.09■■□□□ 1.13
CCSER2-203ENST00000372088 CHIC1Q5VXU3 224 aa22.03■■□□□ 1.12
CCSER2-203ENST00000372088 ZEB1P37275 1124 aaPredicted RBP22.01■■□□□ 1.11
CCSER2-203ENST00000372088 PCGF6Q9BYE7 350 aa21.96■■□□□ 1.11
CCSER2-203ENST00000372088 APLP2Q06481 763 aa21.89■■□□□ 1.09
CCSER2-203ENST00000372088 FAM9AQ8IZU1 332 aaPredicted RBP21.86■■□□□ 1.09
CCSER2-203ENST00000372088 ZCCHC6Q5VYS8 1495 aaKnown RBP21.77■■□□□ 1.08
CCSER2-203ENST00000372088 EHMT2Q96KQ7 1210 aa21.64■■□□□ 1.05
CCSER2-203ENST00000372088 TRIM26Q12899 539 aaPredicted RBP21.62■■□□□ 1.05
CCSER2-203ENST00000372088 HRCP23327 699 aa21.59■■□□□ 1.05
CCSER2-203ENST00000372088 CCDC180Q9P1Z9 1646 aa21.42■■□□□ 1.02
CCSER2-203ENST00000372088 UBTFP17480 764 aaKnown RBP21.4■■□□□ 1.02
CCSER2-203ENST00000372088 PELP1Q8IZL8 1130 aaKnown RBP21.37■■□□□ 1.01
CCSER2-203ENST00000372088 CCER1Q8TC90 406 aaPredicted RBP21.33■■□□□ 1.01
CCSER2-203ENST00000372088 CENPBP07199 599 aaPredicted RBP21.27■■□□□ 1
CCSER2-203ENST00000372088 LOC105371045A0A1W2PR82 267 aa21.27■■□□□ 1
CCSER2-203ENST00000372088 ABCC9O60706 1549 aa21.2■□□□□ 0.99
CCSER2-203ENST00000372088 DCAF1Q9Y4B6 1507 aa21.18■□□□□ 0.98
CCSER2-203ENST00000372088 TTBK1Q5TCY1 1321 aaPredicted RBP21.02■□□□□ 0.96
CCSER2-203ENST00000372088 RANGAP1P46060 587 aaPredicted RBP20.86■□□□□ 0.93
CCSER2-203ENST00000372088 CSRNP3Q8WYN3 585 aa20.81■□□□□ 0.92
CCSER2-203ENST00000372088 RSF1Q96T23 1441 aaPredicted RBP20.79■□□□□ 0.92
CCSER2-203ENST00000372088 PPARGC1BQ86YN6 1023 aaKnown RBP20.73■□□□□ 0.91
CCSER2-203ENST00000372088 SCRIBQ14160 1630 aa20.72■□□□□ 0.91
CCSER2-203ENST00000372088 PABPN1Q86U42 306 aaKnown RBP eCLIP20.71■□□□□ 0.91
CCSER2-203ENST00000372088 MYO15BQ96JP2 1530 aa20.67■□□□□ 0.9
CCSER2-203ENST00000372088 NACADO15069 1562 aa20.66■□□□□ 0.9
CCSER2-203ENST00000372088 ATP1B4Q9UN42 357 aaPredicted RBP20.62■□□□□ 0.89
CCSER2-203ENST00000372088 EEA1Q15075 1411 aa20.6■□□□□ 0.89
CCSER2-203ENST00000372088 HNRNPUL2Q1KMD3 747 aaKnown RBP20.56■□□□□ 0.88
CCSER2-203ENST00000372088 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.52■□□□□ 0.88
CCSER2-203ENST00000372088 RB1CC1Q8TDY2 1594 aa20.49■□□□□ 0.87
CCSER2-203ENST00000372088 MYT1Q01538 1121 aa20.45■□□□□ 0.86
CCSER2-203ENST00000372088 DIEXFQ68CQ4 756 aaKnown RBP20.43■□□□□ 0.86
CCSER2-203ENST00000372088 NEFLP07196 543 aa20.42■□□□□ 0.86
CCSER2-203ENST00000372088 BAZ1AQ9NRL2 1556 aaPredicted RBP20.32■□□□□ 0.84
CCSER2-203ENST00000372088 YTHDC1Q96MU7 727 aaKnown RBP20.3■□□□□ 0.84
CCSER2-203ENST00000372088 ITGAEP38570 1179 aa20.28■□□□□ 0.84
CCSER2-203ENST00000372088 ZNF316A6NFI3 1004 aaPredicted RBP20.27■□□□□ 0.84
CCSER2-203ENST00000372088 TNIKQ9UKE5 1360 aa20.24■□□□□ 0.83
CCSER2-203ENST00000372088 WRNQ14191 1432 aaPredicted RBP eCLIP20.19■□□□□ 0.82
CCSER2-203ENST00000372088 CECR2Q9BXF3 1484 aa20.17■□□□□ 0.82
CCSER2-203ENST00000372088 GOLGA3Q08378 1498 aa20.15■□□□□ 0.82
CCSER2-203ENST00000372088 CLIP1P30622 1438 aa20.14■□□□□ 0.81
CCSER2-203ENST00000372088 CEP162Q5TB80 1403 aa20.1■□□□□ 0.81
CCSER2-203ENST00000372088 FAM50AQ14320 339 aaKnown RBP20.08■□□□□ 0.81
CCSER2-203ENST00000372088 CLSPNQ9HAW4 1339 aa20.05■□□□□ 0.8
CCSER2-203ENST00000372088 CEP164Q9UPV0 1460 aa20.05■□□□□ 0.8
CCSER2-203ENST00000372088 ACIN1Q9UKV3 1341 aaKnown RBP20.01■□□□□ 0.79
CCSER2-203ENST00000372088 BAZ1BQ9UIG0 1483 aaKnown RBP19.99■□□□□ 0.79
CCSER2-203ENST00000372088 MROH2BQ7Z745 1585 aa19.97■□□□□ 0.79
CCSER2-203ENST00000372088 ERICH6Q7L0X2 663 aa19.97■□□□□ 0.79
CCSER2-203ENST00000372088 CDK11AQ9UQ88 783 aaPredicted RBP19.91■□□□□ 0.78
CCSER2-203ENST00000372088 KIF27Q86VH2 1401 aa19.91■□□□□ 0.78
CCSER2-203ENST00000372088 GTF3C3Q9Y5Q9 886 aa19.84■□□□□ 0.77
CCSER2-203ENST00000372088 TRIM52Q96A61 297 aa19.83■□□□□ 0.77
CCSER2-203ENST00000372088 ANP32CO43423 234 aa19.83■□□□□ 0.76
CCSER2-203ENST00000372088 CCDC88BA6NC98 1476 aa19.79■□□□□ 0.76
CCSER2-203ENST00000372088 NEUROD1Q13562 356 aa19.78■□□□□ 0.76
CCSER2-203ENST00000372088 TOP2AP11388 1531 aaKnown RBP19.77■□□□□ 0.75
CCSER2-203ENST00000372088 VPS8Q8N3P4 1428 aa19.72■□□□□ 0.75
CCSER2-203ENST00000372088 SOGA1O94964 1423 aa19.72■□□□□ 0.75
CCSER2-203ENST00000372088 P3H3Q8IVL6 736 aa19.72■□□□□ 0.75
CCSER2-203ENST00000372088 SMARCA2P51531 1590 aa19.71■□□□□ 0.75
CCSER2-203ENST00000372088 TONSLQ96HA7 1378 aa19.69■□□□□ 0.74
CCSER2-203ENST00000372088 TIMELESSQ9UNS1 1208 aa19.68■□□□□ 0.74
CCSER2-203ENST00000372088 MTUS2Q5JR59 1369 aa19.65■□□□□ 0.74
CCSER2-203ENST00000372088 FHAD1B1AJZ9 1412 aa19.6■□□□□ 0.73
CCSER2-203ENST00000372088 POLR3GLQ9BT43 218 aa19.58■□□□□ 0.72
CCSER2-203ENST00000372088 ATAD2BQ9ULI0 1458 aa19.54■□□□□ 0.72
CCSER2-203ENST00000372088 CARMIL1Q5VZK9 1371 aa19.52■□□□□ 0.72
CCSER2-203ENST00000372088 MYT1LQ9UL68 1186 aa19.51■□□□□ 0.71
CCSER2-203ENST00000372088 CCNB3Q8WWL7 1395 aa19.5■□□□□ 0.71
CCSER2-203ENST00000372088 FBLN2P98095 1184 aa19.48■□□□□ 0.71
CCSER2-203ENST00000372088 CUX2O14529 1486 aa19.44■□□□□ 0.7
CCSER2-203ENST00000372088 MIER1Q8N108 512 aa19.42■□□□□ 0.7
CCSER2-203ENST00000372088 SMARCA4P51532 1647 aa19.42■□□□□ 0.7
CCSER2-203ENST00000372088 CADPSQ9ULU8 1353 aa19.42■□□□□ 0.7
CCSER2-203ENST00000372088 ABCC8Q09428 1581 aa19.39■□□□□ 0.69
CCSER2-203ENST00000372088 DDX10Q13206 875 aaKnown RBP19.37■□□□□ 0.69
CCSER2-203ENST00000372088 ZNF326Q5BKZ1 582 aaKnown RBP19.36■□□□□ 0.69
CCSER2-203ENST00000372088 TSPY4P0CV99 314 aa19.36■□□□□ 0.69
CCSER2-203ENST00000372088 TSPY10P0CW01 314 aa19.36■□□□□ 0.69
CCSER2-203ENST00000372088 SCAF1Q9H7N4 1312 aaKnown RBP19.36■□□□□ 0.69
CCSER2-203ENST00000372088 WIZO95785 1651 aa19.34■□□□□ 0.69
CCSER2-203ENST00000372088 ZNF777Q9ULD5 760 aaPredicted RBP19.34■□□□□ 0.69
CCSER2-203ENST00000372088 DAXXQ9UER7 740 aaPredicted RBP19.33■□□□□ 0.69
CCSER2-203ENST00000372088 EIF4G2P78344 907 aaKnown RBP eCLIP19.31■□□□□ 0.68
CCSER2-203ENST00000372088 NCAPD3P42695 1498 aa19.3■□□□□ 0.68
CCSER2-203ENST00000372088 CHMP7Q8WUX9 453 aaPredicted RBP19.29■□□□□ 0.68
CCSER2-203ENST00000372088 FMN1Q68DA7 1419 aa19.28■□□□□ 0.68
CCSER2-203ENST00000372088 ARID3CA6NKF2 412 aa19.28■□□□□ 0.68
CCSER2-203ENST00000372088 CHIC2Q9UKJ5 165 aa19.26■□□□□ 0.67
CCSER2-203ENST00000372088 PDS5BQ9NTI5 1447 aa19.25■□□□□ 0.67
CCSER2-203ENST00000372088 PLEKHD1A6NEE1 506 aa19.25■□□□□ 0.67
CCSER2-203ENST00000372088 SETD5Q9C0A6 1442 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms