RNA–Protein interactions for RNA: ENST00000538374.5

CDH20-203, Transcript of cadherin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH20, Length 2,683 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20-203ENST00000538374 NISCHQ9Y2I1 1504 aa33.26■■■□□ 2.91
CDH20-203ENST00000538374 CCDC180Q9P1Z9 1646 aa28.9■■■□□ 2.22
CDH20-203ENST00000538374 ZCCHC6Q5VYS8 1495 aaKnown RBP28.05■■■□□ 2.08
CDH20-203ENST00000538374 DCAF1Q9Y4B6 1507 aa27.52■■■□□ 2
CDH20-203ENST00000538374 SHROOM4Q9ULL8 1493 aa27.37■■□□□ 1.97
CDH20-203ENST00000538374 DCAF8L2P0C7V8 631 aa27.07■■□□□ 1.92
CDH20-203ENST00000538374 MYO15BQ96JP2 1530 aa27.05■■□□□ 1.92
CDH20-203ENST00000538374 SUPT5HO00267 1087 aaKnown RBP26.9■■□□□ 1.9
CDH20-203ENST00000538374 ABCC9O60706 1549 aa26.89■■□□□ 1.89
CDH20-203ENST00000538374 NACADO15069 1562 aa26.74■■□□□ 1.87
CDH20-203ENST00000538374 SCRIBQ14160 1630 aa26.59■■□□□ 1.85
CDH20-203ENST00000538374 RB1CC1Q8TDY2 1594 aa26.42■■□□□ 1.82
CDH20-203ENST00000538374 UNC13AQ9UPW8 1703 aa26.13■■□□□ 1.77
CDH20-203ENST00000538374 CHIC1Q5VXU3 224 aa25.99■■□□□ 1.75
CDH20-203ENST00000538374 RSF1Q96T23 1441 aaPredicted RBP25.92■■□□□ 1.74
CDH20-203ENST00000538374 CECR2Q9BXF3 1484 aa25.84■■□□□ 1.73
CDH20-203ENST00000538374 BICRAQ9NZM4 1560 aa25.76■■□□□ 1.71
CDH20-203ENST00000538374 MROH2BQ7Z745 1585 aa25.74■■□□□ 1.71
CDH20-203ENST00000538374 BAZ1AQ9NRL2 1556 aaPredicted RBP25.62■■□□□ 1.69
CDH20-203ENST00000538374 WIZO95785 1651 aa25.59■■□□□ 1.69
CDH20-203ENST00000538374 PCGF6Q9BYE7 350 aa25.56■■□□□ 1.68
CDH20-203ENST00000538374 SMARCA4P51532 1647 aa25.54■■□□□ 1.68
CDH20-203ENST00000538374 LOC105371045A0A1W2PR82 267 aa25.51■■□□□ 1.67
CDH20-203ENST00000538374 HRCP23327 699 aa25.4■■□□□ 1.66
CDH20-203ENST00000538374 PABPN1Q86U42 306 aaKnown RBP eCLIP25.36■■□□□ 1.65
CDH20-203ENST00000538374 TOP2AP11388 1531 aaKnown RBP25.28■■□□□ 1.64
CDH20-203ENST00000538374 PPARGC1BQ86YN6 1023 aaKnown RBP25.27■■□□□ 1.64
CDH20-203ENST00000538374 PEG3Q9GZU2 1588 aa25.23■■□□□ 1.63
CDH20-203ENST00000538374 EIF4G1Q04637 1599 aaKnown RBP25.16■■□□□ 1.62
CDH20-203ENST00000538374 SMARCA2P51531 1590 aa25.1■■□□□ 1.61
CDH20-203ENST00000538374 EHMT2Q96KQ7 1210 aa25■■□□□ 1.59
CDH20-203ENST00000538374 CCDC88BA6NC98 1476 aa25■■□□□ 1.59
CDH20-203ENST00000538374 ATAD2BQ9ULI0 1458 aa24.96■■□□□ 1.59
CDH20-203ENST00000538374 FAM9AQ8IZU1 332 aaPredicted RBP24.96■■□□□ 1.59
CDH20-203ENST00000538374 TRIM41Q8WV44 630 aa24.82■■□□□ 1.56
CDH20-203ENST00000538374 BAZ1BQ9UIG0 1483 aaKnown RBP24.8■■□□□ 1.56
CDH20-203ENST00000538374 TRIM26Q12899 539 aaPredicted RBP24.72■■□□□ 1.55
CDH20-203ENST00000538374 HMGXB3Q12766 1538 aa24.72■■□□□ 1.55
CDH20-203ENST00000538374 NCAPD3P42695 1498 aa24.67■■□□□ 1.54
CDH20-203ENST00000538374 ABCC8Q09428 1581 aa24.64■■□□□ 1.53
CDH20-203ENST00000538374 CC2D2AQ9P2K1 1620 aa24.42■■□□□ 1.5
CDH20-203ENST00000538374 SYNJ1O43426 1573 aa24.35■■□□□ 1.49
CDH20-203ENST00000538374 WRNQ14191 1432 aaPredicted RBP eCLIP24.33■■□□□ 1.49
CDH20-203ENST00000538374 PRDM2Q13029 1718 aa24.3■■□□□ 1.48
CDH20-203ENST00000538374 CFTRP13569 1480 aa24.24■■□□□ 1.47
CDH20-203ENST00000538374 BIVM-ERCC5R4GMW8 1640 aa24.21■■□□□ 1.47
CDH20-203ENST00000538374 TOP2BQ02880 1626 aa24.2■■□□□ 1.46
CDH20-203ENST00000538374 SOGA1O94964 1423 aa24.19■■□□□ 1.46
CDH20-203ENST00000538374 TTBK1Q5TCY1 1321 aaPredicted RBP24.17■■□□□ 1.46
CDH20-203ENST00000538374 EEA1Q15075 1411 aa24.14■■□□□ 1.45
CDH20-203ENST00000538374 RUSC2Q8N2Y8 1516 aa24.13■■□□□ 1.45
CDH20-203ENST00000538374 CUX1P39880 1505 aa24.05■■□□□ 1.44
CDH20-203ENST00000538374 ZEB1P37275 1124 aaPredicted RBP24.04■■□□□ 1.44
CDH20-203ENST00000538374 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.03■■□□□ 1.44
CDH20-203ENST00000538374 CADPSQ9ULU8 1353 aa24.02■■□□□ 1.44
CDH20-203ENST00000538374 KIF21BO75037 1637 aa23.94■■□□□ 1.42
CDH20-203ENST00000538374 CSRNP3Q8WYN3 585 aa23.92■■□□□ 1.42
CDH20-203ENST00000538374 GOLGA3Q08378 1498 aa23.86■■□□□ 1.41
CDH20-203ENST00000538374 TNIKQ9UKE5 1360 aa23.84■■□□□ 1.41
CDH20-203ENST00000538374 CCER1Q8TC90 406 aaPredicted RBP23.83■■□□□ 1.41
CDH20-203ENST00000538374 CEP164Q9UPV0 1460 aa23.81■■□□□ 1.4
CDH20-203ENST00000538374 LAMC3Q9Y6N6 1575 aa23.8■■□□□ 1.4
CDH20-203ENST00000538374 NESP48681 1621 aa23.79■■□□□ 1.4
CDH20-203ENST00000538374 FANCD2Q9BXW9 1451 aa23.79■■□□□ 1.4
CDH20-203ENST00000538374 CEP162Q5TB80 1403 aa23.76■■□□□ 1.39
CDH20-203ENST00000538374 UBTFP17480 764 aaKnown RBP23.7■■□□□ 1.39
CDH20-203ENST00000538374 DNMBPQ6XZF7 1577 aa23.69■■□□□ 1.38
CDH20-203ENST00000538374 RAPGEF2Q9Y4G8 1499 aa23.69■■□□□ 1.38
CDH20-203ENST00000538374 DNAJC5BQ9UF47 199 aa23.69■■□□□ 1.38
CDH20-203ENST00000538374 ERICH3Q5RHP9 1530 aa23.68■■□□□ 1.38
CDH20-203ENST00000538374 FGD5Q6ZNL6 1462 aa23.68■■□□□ 1.38
CDH20-203ENST00000538374 PRXQ9BXM0 1461 aa23.68■■□□□ 1.38
CDH20-203ENST00000538374 SCAF1Q9H7N4 1312 aaKnown RBP23.68■■□□□ 1.38
CDH20-203ENST00000538374 KIF27Q86VH2 1401 aa23.64■■□□□ 1.37
CDH20-203ENST00000538374 TOPBP1Q92547 1522 aa23.61■■□□□ 1.37
CDH20-203ENST00000538374 KIF21AQ7Z4S6 1674 aa23.59■■□□□ 1.37
CDH20-203ENST00000538374 RANGAP1P46060 587 aaPredicted RBP23.55■■□□□ 1.36
CDH20-203ENST00000538374 URB2Q14146 1524 aaKnown RBP23.54■■□□□ 1.36
CDH20-203ENST00000538374 CUX2O14529 1486 aa23.54■■□□□ 1.36
CDH20-203ENST00000538374 WDR97A6NE52 1622 aa23.53■■□□□ 1.36
CDH20-203ENST00000538374 POLA1P09884 1462 aaPredicted RBP23.52■■□□□ 1.36
CDH20-203ENST00000538374 ABCA10Q8WWZ4 1543 aa23.49■■□□□ 1.35
CDH20-203ENST00000538374 PDS5BQ9NTI5 1447 aa23.49■■□□□ 1.35
CDH20-203ENST00000538374 CLIP1P30622 1438 aa23.46■■□□□ 1.35
CDH20-203ENST00000538374 IGF1RP08069 1367 aa23.44■■□□□ 1.34
CDH20-203ENST00000538374 RAD54L2Q9Y4B4 1467 aa23.44■■□□□ 1.34
CDH20-203ENST00000538374 DIEXFQ68CQ4 756 aaKnown RBP23.4■■□□□ 1.34
CDH20-203ENST00000538374 HNRNPUL2Q1KMD3 747 aaKnown RBP23.39■■□□□ 1.33
CDH20-203ENST00000538374 NEUROD1Q13562 356 aa23.38■■□□□ 1.33
CDH20-203ENST00000538374 ABCA5Q8WWZ7 1642 aa23.35■■□□□ 1.33
CDH20-203ENST00000538374 VPS8Q8N3P4 1428 aa23.34■■□□□ 1.33
CDH20-203ENST00000538374 TARBP1Q13395 1621 aaKnown RBP23.31■■□□□ 1.32
CDH20-203ENST00000538374 ARAP1Q96P48 1450 aa23.31■■□□□ 1.32
CDH20-203ENST00000538374 CUL7Q14999 1698 aa23.31■■□□□ 1.32
CDH20-203ENST00000538374 CARMIL1Q5VZK9 1371 aa23.29■■□□□ 1.32
CDH20-203ENST00000538374 ACIN1Q9UKV3 1341 aaKnown RBP23.25■■□□□ 1.31
CDH20-203ENST00000538374 MRC2Q9UBG0 1479 aa23.25■■□□□ 1.31
CDH20-203ENST00000538374 ARHGAP35Q9NRY4 1499 aa23.21■■□□□ 1.31
CDH20-203ENST00000538374 WDR62O43379 1518 aa23.18■■□□□ 1.3
CDH20-203ENST00000538374 CTTNBP2Q8WZ74 1663 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms