RNA–Protein interactions for RNA: ENST00000447733.5

TOM1-209, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2 BASIC

Gene TOM1, Length 2,317 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-209ENST00000447733 NISCHQ9Y2I1 1504 aa34.69■■■■□ 3.14
TOM1-209ENST00000447733 CCDC180Q9P1Z9 1646 aa30.11■■■□□ 2.41
TOM1-209ENST00000447733 ZCCHC6Q5VYS8 1495 aaKnown RBP29.23■■■□□ 2.27
TOM1-209ENST00000447733 DCAF1Q9Y4B6 1507 aa28.69■■■□□ 2.18
TOM1-209ENST00000447733 SHROOM4Q9ULL8 1493 aa28.56■■■□□ 2.16
TOM1-209ENST00000447733 DCAF8L2P0C7V8 631 aa28.47■■■□□ 2.15
TOM1-209ENST00000447733 MYO15BQ96JP2 1530 aa28.2■■■□□ 2.1
TOM1-209ENST00000447733 ABCC9O60706 1549 aa28.07■■■□□ 2.08
TOM1-209ENST00000447733 NACADO15069 1562 aa27.91■■■□□ 2.06
TOM1-209ENST00000447733 SCRIBQ14160 1630 aa27.73■■■□□ 2.03
TOM1-209ENST00000447733 SUPT5HO00267 1087 aaKnown RBP27.65■■■□□ 2.02
TOM1-209ENST00000447733 RB1CC1Q8TDY2 1594 aa27.59■■■□□ 2.01
TOM1-209ENST00000447733 UNC13AQ9UPW8 1703 aa27.1■■□□□ 1.93
TOM1-209ENST00000447733 RSF1Q96T23 1441 aaPredicted RBP27.05■■□□□ 1.92
TOM1-209ENST00000447733 CECR2Q9BXF3 1484 aa26.92■■□□□ 1.9
TOM1-209ENST00000447733 MROH2BQ7Z745 1585 aa26.82■■□□□ 1.88
TOM1-209ENST00000447733 BAZ1AQ9NRL2 1556 aaPredicted RBP26.76■■□□□ 1.88
TOM1-209ENST00000447733 BICRAQ9NZM4 1560 aa26.76■■□□□ 1.87
TOM1-209ENST00000447733 CHIC1Q5VXU3 224 aa26.68■■□□□ 1.86
TOM1-209ENST00000447733 WIZO95785 1651 aa26.64■■□□□ 1.86
TOM1-209ENST00000447733 SMARCA4P51532 1647 aa26.61■■□□□ 1.85
TOM1-209ENST00000447733 PABPN1Q86U42 306 aaKnown RBP eCLIP26.52■■□□□ 1.84
TOM1-209ENST00000447733 TOP2AP11388 1531 aaKnown RBP26.37■■□□□ 1.81
TOM1-209ENST00000447733 PEG3Q9GZU2 1588 aa26.26■■□□□ 1.79
TOM1-209ENST00000447733 SMARCA2P51531 1590 aa26.14■■□□□ 1.78
TOM1-209ENST00000447733 EIF4G1Q04637 1599 aaKnown RBP26.11■■□□□ 1.77
TOM1-209ENST00000447733 CCDC88BA6NC98 1476 aa26.09■■□□□ 1.77
TOM1-209ENST00000447733 ATAD2BQ9ULI0 1458 aa26.04■■□□□ 1.76
TOM1-209ENST00000447733 TRIM41Q8WV44 630 aa25.97■■□□□ 1.75
TOM1-209ENST00000447733 BAZ1BQ9UIG0 1483 aaKnown RBP25.93■■□□□ 1.74
TOM1-209ENST00000447733 HMGXB3Q12766 1538 aa25.78■■□□□ 1.72
TOM1-209ENST00000447733 NCAPD3P42695 1498 aa25.74■■□□□ 1.71
TOM1-209ENST00000447733 ABCC8Q09428 1581 aa25.69■■□□□ 1.7
TOM1-209ENST00000447733 LOC105371045A0A1W2PR82 267 aa25.66■■□□□ 1.7
TOM1-209ENST00000447733 FAM9AQ8IZU1 332 aaPredicted RBP25.5■■□□□ 1.67
TOM1-209ENST00000447733 WRNQ14191 1432 aaPredicted RBP eCLIP25.46■■□□□ 1.67
TOM1-209ENST00000447733 CC2D2AQ9P2K1 1620 aa25.44■■□□□ 1.66
TOM1-209ENST00000447733 SYNJ1O43426 1573 aa25.36■■□□□ 1.65
TOM1-209ENST00000447733 EEA1Q15075 1411 aa25.3■■□□□ 1.64
TOM1-209ENST00000447733 CFTRP13569 1480 aa25.29■■□□□ 1.64
TOM1-209ENST00000447733 PRDM2Q13029 1718 aa25.26■■□□□ 1.63
TOM1-209ENST00000447733 SOGA1O94964 1423 aa25.26■■□□□ 1.63
TOM1-209ENST00000447733 TOP2BQ02880 1626 aa25.23■■□□□ 1.63
TOM1-209ENST00000447733 BIVM-ERCC5R4GMW8 1640 aa25.21■■□□□ 1.63
TOM1-209ENST00000447733 RUSC2Q8N2Y8 1516 aa25.14■■□□□ 1.62
TOM1-209ENST00000447733 EHMT2Q96KQ7 1210 aa25.13■■□□□ 1.61
TOM1-209ENST00000447733 CADPSQ9ULU8 1353 aa25.1■■□□□ 1.61
TOM1-209ENST00000447733 CSRNP3Q8WYN3 585 aa25.09■■□□□ 1.61
TOM1-209ENST00000447733 CUX1P39880 1505 aa25.06■■□□□ 1.6
TOM1-209ENST00000447733 HRCP23327 699 aa25.02■■□□□ 1.6
TOM1-209ENST00000447733 KIF21BO75037 1637 aa24.99■■□□□ 1.59
TOM1-209ENST00000447733 GOLGA3Q08378 1498 aa24.98■■□□□ 1.59
TOM1-209ENST00000447733 TNIKQ9UKE5 1360 aa24.96■■□□□ 1.59
TOM1-209ENST00000447733 CEP164Q9UPV0 1460 aa24.94■■□□□ 1.58
TOM1-209ENST00000447733 PCGF6Q9BYE7 350 aa24.91■■□□□ 1.58
TOM1-209ENST00000447733 CEP162Q5TB80 1403 aa24.87■■□□□ 1.57
TOM1-209ENST00000447733 FANCD2Q9BXW9 1451 aa24.85■■□□□ 1.57
TOM1-209ENST00000447733 LAMC3Q9Y6N6 1575 aa24.83■■□□□ 1.57
TOM1-209ENST00000447733 TRIM26Q12899 539 aaPredicted RBP24.82■■□□□ 1.56
TOM1-209ENST00000447733 UBTFP17480 764 aaKnown RBP24.8■■□□□ 1.56
TOM1-209ENST00000447733 NESP48681 1621 aa24.78■■□□□ 1.56
TOM1-209ENST00000447733 KIF27Q86VH2 1401 aa24.77■■□□□ 1.56
TOM1-209ENST00000447733 RAPGEF2Q9Y4G8 1499 aa24.74■■□□□ 1.55
TOM1-209ENST00000447733 ERICH3Q5RHP9 1530 aa24.74■■□□□ 1.55
TOM1-209ENST00000447733 DNMBPQ6XZF7 1577 aa24.72■■□□□ 1.55
TOM1-209ENST00000447733 FGD5Q6ZNL6 1462 aa24.72■■□□□ 1.55
TOM1-209ENST00000447733 PRXQ9BXM0 1461 aa24.71■■□□□ 1.55
TOM1-209ENST00000447733 TOPBP1Q92547 1522 aa24.63■■□□□ 1.53
TOM1-209ENST00000447733 CUX2O14529 1486 aa24.63■■□□□ 1.53
TOM1-209ENST00000447733 DNAJC5BQ9UF47 199 aa24.61■■□□□ 1.53
TOM1-209ENST00000447733 PDS5BQ9NTI5 1447 aa24.6■■□□□ 1.53
TOM1-209ENST00000447733 CLIP1P30622 1438 aa24.58■■□□□ 1.52
TOM1-209ENST00000447733 POLA1P09884 1462 aaPredicted RBP24.54■■□□□ 1.52
TOM1-209ENST00000447733 KIF21AQ7Z4S6 1674 aa24.53■■□□□ 1.52
TOM1-209ENST00000447733 URB2Q14146 1524 aaKnown RBP24.52■■□□□ 1.52
TOM1-209ENST00000447733 ABCA10Q8WWZ4 1543 aa24.51■■□□□ 1.51
TOM1-209ENST00000447733 IGF1RP08069 1367 aa24.49■■□□□ 1.51
TOM1-209ENST00000447733 RAD54L2Q9Y4B4 1467 aa24.46■■□□□ 1.51
TOM1-209ENST00000447733 WDR97A6NE52 1622 aa24.44■■□□□ 1.5
TOM1-209ENST00000447733 VPS8Q8N3P4 1428 aa24.43■■□□□ 1.5
TOM1-209ENST00000447733 PPARGC1BQ86YN6 1023 aaKnown RBP24.43■■□□□ 1.5
TOM1-209ENST00000447733 CARMIL1Q5VZK9 1371 aa24.38■■□□□ 1.49
TOM1-209ENST00000447733 CUL7Q14999 1698 aa24.34■■□□□ 1.49
TOM1-209ENST00000447733 ABCA5Q8WWZ7 1642 aa24.31■■□□□ 1.48
TOM1-209ENST00000447733 ARAP1Q96P48 1450 aa24.3■■□□□ 1.48
TOM1-209ENST00000447733 MRC2Q9UBG0 1479 aa24.28■■□□□ 1.48
TOM1-209ENST00000447733 RANGAP1P46060 587 aaPredicted RBP24.28■■□□□ 1.48
TOM1-209ENST00000447733 TARBP1Q13395 1621 aaKnown RBP24.25■■□□□ 1.47
TOM1-209ENST00000447733 ARHGAP35Q9NRY4 1499 aa24.22■■□□□ 1.47
TOM1-209ENST00000447733 GAPVD1Q14C86 1478 aa24.19■■□□□ 1.46
TOM1-209ENST00000447733 TTBK1Q5TCY1 1321 aaPredicted RBP24.17■■□□□ 1.46
TOM1-209ENST00000447733 TDRD9Q8NDG6 1382 aaKnown RBP24.16■■□□□ 1.46
TOM1-209ENST00000447733 APLP2Q06481 763 aa24.16■■□□□ 1.46
TOM1-209ENST00000447733 WDR62O43379 1518 aa24.15■■□□□ 1.46
TOM1-209ENST00000447733 CTTNBP2Q8WZ74 1663 aa24.14■■□□□ 1.46
TOM1-209ENST00000447733 PBRM1Q86U86 1689 aa24.09■■□□□ 1.45
TOM1-209ENST00000447733 ZEB1P37275 1124 aaPredicted RBP24.05■■□□□ 1.44
TOM1-209ENST00000447733 EFCAB5A4FU69 1503 aa24.04■■□□□ 1.44
TOM1-209ENST00000447733 IFT140Q96RY7 1462 aa24.04■■□□□ 1.44
TOM1-209ENST00000447733 ERCC6Q03468 1493 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms