RNA–Protein interactions for RNA: ENST00000222399.10

LAMB1-201, Transcript of laminin subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMB1, Length 5,725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-201ENST00000222399 DCAF8L2P0C7V8 631 aa23.57■■□□□ 1.36
LAMB1-201ENST00000222399 NISCHQ9Y2I1 1504 aa22.62■■□□□ 1.21
LAMB1-201ENST00000222399 SUPT5HO00267 1087 aaKnown RBP22.36■■□□□ 1.17
LAMB1-201ENST00000222399 SHROOM4Q9ULL8 1493 aa21.97■■□□□ 1.11
LAMB1-201ENST00000222399 EHMT2Q96KQ7 1210 aa21.57■■□□□ 1.04
LAMB1-201ENST00000222399 APLP2Q06481 763 aa21.43■■□□□ 1.02
LAMB1-201ENST00000222399 PELP1Q8IZL8 1130 aaKnown RBP21.35■■□□□ 1.01
LAMB1-201ENST00000222399 FAM9AQ8IZU1 332 aaPredicted RBP21.17■□□□□ 0.98
LAMB1-201ENST00000222399 TTBK1Q5TCY1 1321 aaPredicted RBP20.87■□□□□ 0.93
LAMB1-201ENST00000222399 PCGF6Q9BYE7 350 aa20.83■□□□□ 0.93
LAMB1-201ENST00000222399 TRIM41Q8WV44 630 aa20.8■□□□□ 0.92
LAMB1-201ENST00000222399 ZEB1P37275 1124 aaPredicted RBP20.7■□□□□ 0.9
LAMB1-201ENST00000222399 RANGAP1P46060 587 aaPredicted RBP20.7■□□□□ 0.9
LAMB1-201ENST00000222399 ATP1B4Q9UN42 357 aaPredicted RBP20.6■□□□□ 0.89
LAMB1-201ENST00000222399 CCER1Q8TC90 406 aaPredicted RBP20.58■□□□□ 0.89
LAMB1-201ENST00000222399 CENPBP07199 599 aaPredicted RBP20.57■□□□□ 0.88
LAMB1-201ENST00000222399 UBTFP17480 764 aaKnown RBP20.56■□□□□ 0.88
LAMB1-201ENST00000222399 ERICH6Q7L0X2 663 aa20.38■□□□□ 0.85
LAMB1-201ENST00000222399 NEFLP07196 543 aa20.18■□□□□ 0.82
LAMB1-201ENST00000222399 TRIM26Q12899 539 aaPredicted RBP20.07■□□□□ 0.8
LAMB1-201ENST00000222399 PPARGC1BQ86YN6 1023 aaKnown RBP20.05■□□□□ 0.8
LAMB1-201ENST00000222399 YTHDC1Q96MU7 727 aaKnown RBP20.04■□□□□ 0.8
LAMB1-201ENST00000222399 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.91■□□□□ 0.78
LAMB1-201ENST00000222399 HNRNPUL2Q1KMD3 747 aaKnown RBP19.91■□□□□ 0.78
LAMB1-201ENST00000222399 MYT1LQ9UL68 1186 aa19.86■□□□□ 0.77
LAMB1-201ENST00000222399 ITGAEP38570 1179 aa19.85■□□□□ 0.77
LAMB1-201ENST00000222399 CHIC1Q5VXU3 224 aa19.79■□□□□ 0.76
LAMB1-201ENST00000222399 LOC105371045A0A1W2PR82 267 aa19.74■□□□□ 0.75
LAMB1-201ENST00000222399 HRCP23327 699 aa19.73■□□□□ 0.75
LAMB1-201ENST00000222399 POLR3GLQ9BT43 218 aa19.72■□□□□ 0.75
LAMB1-201ENST00000222399 MYT1Q01538 1121 aa19.69■□□□□ 0.74
LAMB1-201ENST00000222399 DAXXQ9UER7 740 aaPredicted RBP19.6■□□□□ 0.73
LAMB1-201ENST00000222399 ABCC9O60706 1549 aa19.49■□□□□ 0.71
LAMB1-201ENST00000222399 CNGB1Q14028 1251 aaPredicted RBP19.42■□□□□ 0.7
LAMB1-201ENST00000222399 PABPN1Q86U42 306 aaKnown RBP eCLIP19.42■□□□□ 0.7
LAMB1-201ENST00000222399 FAM50AQ14320 339 aaKnown RBP19.42■□□□□ 0.7
LAMB1-201ENST00000222399 SLC4A1APQ9BWU0 796 aaKnown RBP19.39■□□□□ 0.69
LAMB1-201ENST00000222399 TRIM52Q96A61 297 aa19.33■□□□□ 0.69
LAMB1-201ENST00000222399 DIEXFQ68CQ4 756 aaKnown RBP19.32■□□□□ 0.68
LAMB1-201ENST00000222399 NEUROD1Q13562 356 aa19.2■□□□□ 0.66
LAMB1-201ENST00000222399 CLSPNQ9HAW4 1339 aa19.18■□□□□ 0.66
LAMB1-201ENST00000222399 ZNF316A6NFI3 1004 aaPredicted RBP19.14■□□□□ 0.65
LAMB1-201ENST00000222399 FBLN2P98095 1184 aa19.09■□□□□ 0.65
LAMB1-201ENST00000222399 RTL5Q5HYW3 569 aaPredicted RBP19.08■□□□□ 0.64
LAMB1-201ENST00000222399 ANP32CO43423 234 aa19.07■□□□□ 0.64
LAMB1-201ENST00000222399 ZNF326Q5BKZ1 582 aaKnown RBP19.05■□□□□ 0.64
LAMB1-201ENST00000222399 CSRNP3Q8WYN3 585 aa18.97■□□□□ 0.63
LAMB1-201ENST00000222399 P3H3Q8IVL6 736 aa18.91■□□□□ 0.62
LAMB1-201ENST00000222399 ZBTB47Q9UFB7 747 aaPredicted RBP18.9■□□□□ 0.62
LAMB1-201ENST00000222399 CDK11AQ9UQ88 783 aaPredicted RBP18.86■□□□□ 0.61
LAMB1-201ENST00000222399 BCANQ96GW7 911 aa18.85■□□□□ 0.61
LAMB1-201ENST00000222399 ARID3CA6NKF2 412 aa18.82■□□□□ 0.6
LAMB1-201ENST00000222399 NEFMP07197 916 aa18.82■□□□□ 0.6
LAMB1-201ENST00000222399 GTF3C3Q9Y5Q9 886 aa18.81■□□□□ 0.6
LAMB1-201ENST00000222399 SCRIBQ14160 1630 aa18.81■□□□□ 0.6
LAMB1-201ENST00000222399 CANXP27824 592 aaKnown RBP18.8■□□□□ 0.6
LAMB1-201ENST00000222399 ZNF777Q9ULD5 760 aaPredicted RBP18.79■□□□□ 0.6
LAMB1-201ENST00000222399 ZCCHC6Q5VYS8 1495 aaKnown RBP18.71■□□□□ 0.59
LAMB1-201ENST00000222399 SLC24A1O60721 1099 aa18.71■□□□□ 0.58
LAMB1-201ENST00000222399 TONSLQ96HA7 1378 aa18.64■□□□□ 0.57
LAMB1-201ENST00000222399 ESF1Q9H501 851 aaKnown RBP18.63■□□□□ 0.57
LAMB1-201ENST00000222399 ACIN1Q9UKV3 1341 aaKnown RBP18.58■□□□□ 0.56
LAMB1-201ENST00000222399 DCAF1Q9Y4B6 1507 aa18.56■□□□□ 0.56
LAMB1-201ENST00000222399 BCL11AQ9H165 835 aa18.56■□□□□ 0.56
LAMB1-201ENST00000222399 NPM1P06748 294 aaKnown RBP eCLIP18.54■□□□□ 0.56
LAMB1-201ENST00000222399 ANP32AP39687 249 aaKnown RBP18.54■□□□□ 0.56
LAMB1-201ENST00000222399 CCDC180Q9P1Z9 1646 aa18.53■□□□□ 0.56
LAMB1-201ENST00000222399 STAG3Q9UJ98 1225 aa18.53■□□□□ 0.56
LAMB1-201ENST00000222399 CHGAP10645 457 aaKnown RBP18.52■□□□□ 0.55
LAMB1-201ENST00000222399 CHIC2Q9UKJ5 165 aa18.4■□□□□ 0.54
LAMB1-201ENST00000222399 HNRNPUQ00839 825 aaKnown RBP eCLIP18.4■□□□□ 0.54
LAMB1-201ENST00000222399 DDX10Q13206 875 aaKnown RBP18.39■□□□□ 0.53
LAMB1-201ENST00000222399 TSPY4P0CV99 314 aa18.38■□□□□ 0.53
LAMB1-201ENST00000222399 TSPY10P0CW01 314 aa18.38■□□□□ 0.53
LAMB1-201ENST00000222399 MTUS2Q5JR59 1369 aa18.38■□□□□ 0.53
LAMB1-201ENST00000222399 NPM2Q86SE8 214 aaKnown RBP18.38■□□□□ 0.53
LAMB1-201ENST00000222399 FKBP8Q14318 412 aa18.38■□□□□ 0.53
LAMB1-201ENST00000222399 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.37■□□□□ 0.535e-7■■□□□ 11.7
LAMB1-201ENST00000222399 FAM9BQ8IZU0 186 aa18.37■□□□□ 0.53
LAMB1-201ENST00000222399 RB1CC1Q8TDY2 1594 aa18.34■□□□□ 0.53
LAMB1-201ENST00000222399 CHMP7Q8WUX9 453 aaPredicted RBP18.33■□□□□ 0.53
LAMB1-201ENST00000222399 UPF2Q9HAU5 1272 aaKnown RBP18.33■□□□□ 0.52
LAMB1-201ENST00000222399 CLIP1P30622 1438 aa18.32■□□□□ 0.52
LAMB1-201ENST00000222399 TMC1Q8TDI8 760 aa18.32■□□□□ 0.52
LAMB1-201ENST00000222399 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.3■□□□□ 0.52
LAMB1-201ENST00000222399 HSP90AA1P07900 732 aaKnown RBP18.28■□□□□ 0.52
LAMB1-201ENST00000222399 PLPPR3Q6T4P5 718 aa18.28■□□□□ 0.52
LAMB1-201ENST00000222399 WDR43Q15061 677 aaKnown RBP eCLIP18.28■□□□□ 0.523e-6■■■□□ 15.1
LAMB1-201ENST00000222399 EEA1Q15075 1411 aa18.27■□□□□ 0.52
LAMB1-201ENST00000222399 ANP32BQ92688 251 aaKnown RBP18.25■□□□□ 0.51
LAMB1-201ENST00000222399 KDM2AQ9Y2K7 1162 aa18.24■□□□□ 0.51
LAMB1-201ENST00000222399 RSF1Q96T23 1441 aaPredicted RBP18.24■□□□□ 0.51
LAMB1-201ENST00000222399 SALL2Q9Y467 1007 aaPredicted RBP18.24■□□□□ 0.51
LAMB1-201ENST00000222399 GOLGA3Q08378 1498 aa18.23■□□□□ 0.51
LAMB1-201ENST00000222399 MRS2Q9HD23 443 aa18.22■□□□□ 0.51
LAMB1-201ENST00000222399 CCDC136Q96JN2 1154 aa18.2■□□□□ 0.5
LAMB1-201ENST00000222399 EIF4G2P78344 907 aaKnown RBP eCLIP18.17■□□□□ 0.5
LAMB1-201ENST00000222399 RRP7BPQ9NSQ0 103 aa18.14■□□□□ 0.49
LAMB1-201ENST00000222399 PLEKHD1A6NEE1 506 aa18.14■□□□□ 0.49
LAMB1-201ENST00000222399 CEP162Q5TB80 1403 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms