RNA–Protein interactions for RNA: ENST00000420110.1

HLA-L-209, Transcript of major histocompatibility complex, class I, L (pseudogene), humanhuman

BASIC

Gene HLA-L, Length 1,011 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-L-209ENST00000420110 NISCHQ9Y2I1 1504 aa52.7■■■■■ 6.03
HLA-L-209ENST00000420110 ABCC9O60706 1549 aa47.79■■■■■ 5.24
HLA-L-209ENST00000420110 CCDC180Q9P1Z9 1646 aa47.42■■■■■ 5.18
HLA-L-209ENST00000420110 RB1CC1Q8TDY2 1594 aa45.3■■■■■ 4.84
HLA-L-209ENST00000420110 DNAJC5BQ9UF47 199 aa45.12■■■■■ 4.81
HLA-L-209ENST00000420110 NACADO15069 1562 aa44.9■■■■■ 4.78
HLA-L-209ENST00000420110 DCAF8L2P0C7V8 631 aa44.62■■■■■ 4.73
HLA-L-209ENST00000420110 PABPN1Q86U42 306 aaKnown RBP eCLIP44.43■■■■■ 4.7
HLA-L-209ENST00000420110 UNC13AQ9UPW8 1703 aa44.32■■■■■ 4.69
HLA-L-209ENST00000420110 MYO15BQ96JP2 1530 aa44.14■■■■■ 4.66
HLA-L-209ENST00000420110 BICRAQ9NZM4 1560 aa44.04■■■■■ 4.64
HLA-L-209ENST00000420110 ZCCHC6Q5VYS8 1495 aaKnown RBP43.62■■■■■ 4.57
HLA-L-209ENST00000420110 DCAF1Q9Y4B6 1507 aa43.47■■■■■ 4.55
HLA-L-209ENST00000420110 SHROOM4Q9ULL8 1493 aa43.33■■■■■ 4.53
HLA-L-209ENST00000420110 SCRIBQ14160 1630 aa43.25■■■■■ 4.51
HLA-L-209ENST00000420110 CC2D2AQ9P2K1 1620 aa43.15■■■■■ 4.5
HLA-L-209ENST00000420110 CECR2Q9BXF3 1484 aa43.06■■■■■ 4.48
HLA-L-209ENST00000420110 EIF4G1Q04637 1599 aaKnown RBP42.98■■■■■ 4.47
HLA-L-209ENST00000420110 DNAJC5Q9H3Z4 198 aa41.63■■■■■ 4.25
HLA-L-209ENST00000420110 NCAPD3P42695 1498 aa41.46■■■■■ 4.23
HLA-L-209ENST00000420110 ATAD2BQ9ULI0 1458 aa41.3■■■■■ 4.2
HLA-L-209ENST00000420110 CUX2O14529 1486 aa41.28■■■■■ 4.2
HLA-L-209ENST00000420110 ERCC6Q03468 1493 aa41.27■■■■■ 4.2
HLA-L-209ENST00000420110 SMARCA4P51532 1647 aa41.19■■■■■ 4.18
HLA-L-209ENST00000420110 SMARCA2P51531 1590 aa41.16■■■■■ 4.18
HLA-L-209ENST00000420110 HMGXB3Q12766 1538 aa41.13■■■■■ 4.18
HLA-L-209ENST00000420110 NESP48681 1621 aa40.97■■■■■ 4.15
HLA-L-209ENST00000420110 BAZ1AQ9NRL2 1556 aaPredicted RBP40.91■■■■■ 4.14
HLA-L-209ENST00000420110 BAZ1BQ9UIG0 1483 aaKnown RBP40.89■■■■■ 4.14
HLA-L-209ENST00000420110 PEG3Q9GZU2 1588 aa40.77■■■■■ 4.12
HLA-L-209ENST00000420110 MROH2BQ7Z745 1585 aa40.63■■■■■ 4.09
HLA-L-209ENST00000420110 THOC2Q8NI27 1593 aaKnown RBP40.62■■■■■ 4.09
HLA-L-209ENST00000420110 LAMC3Q9Y6N6 1575 aa40.59■■■■■ 4.09
HLA-L-209ENST00000420110 KIF21AQ7Z4S6 1674 aa40.43■■■■■ 4.06
HLA-L-209ENST00000420110 PDS5BQ9NTI5 1447 aa40.34■■■■■ 4.05
HLA-L-209ENST00000420110 CADPSQ9ULU8 1353 aa40.18■■■■■ 4.02
HLA-L-209ENST00000420110 WIZO95785 1651 aa40.13■■■■■ 4.01
HLA-L-209ENST00000420110 MRC2Q9UBG0 1479 aa40.04■■■■■ 4
HLA-L-209ENST00000420110 WDR62O43379 1518 aa39.97■■■■□ 3.99
HLA-L-209ENST00000420110 CEP164Q9UPV0 1460 aa39.82■■■■□ 3.97
HLA-L-209ENST00000420110 FANCD2Q9BXW9 1451 aa39.75■■■■□ 3.95
HLA-L-209ENST00000420110 TRIM41Q8WV44 630 aa39.72■■■■□ 3.95
HLA-L-209ENST00000420110 CFTRP13569 1480 aa39.67■■■■□ 3.94
HLA-L-209ENST00000420110 RSF1Q96T23 1441 aaPredicted RBP39.64■■■■□ 3.94
HLA-L-209ENST00000420110 TOP2AP11388 1531 aaKnown RBP39.57■■■■□ 3.93
HLA-L-209ENST00000420110 URB2Q14146 1524 aaKnown RBP39.46■■■■□ 3.91
HLA-L-209ENST00000420110 OSCARQ8IYS5 282 aa39.32■■■■□ 3.89
HLA-L-209ENST00000420110 PRDM2Q13029 1718 aa39.24■■■■□ 3.87
HLA-L-209ENST00000420110 CCDC88BA6NC98 1476 aa39.13■■■■□ 3.85
HLA-L-209ENST00000420110 ZNF608Q9ULD9 1512 aaPredicted RBP39.04■■■■□ 3.84
HLA-L-209ENST00000420110 IFT140Q96RY7 1462 aa39.02■■■■□ 3.84
HLA-L-209ENST00000420110 TOPBP1Q92547 1522 aa38.97■■■■□ 3.83
HLA-L-209ENST00000420110 RIMBP3CA6NJZ7 1639 aa38.91■■■■□ 3.82
HLA-L-209ENST00000420110 RIMBP3BA6NNM3 1639 aa38.91■■■■□ 3.82
HLA-L-209ENST00000420110 RIMBP3Q9UFD9 1639 aa38.91■■■■□ 3.82
HLA-L-209ENST00000420110 EIF4G3O43432 1585 aaKnown RBP38.82■■■■□ 3.8
HLA-L-209ENST00000420110 ABCC8Q09428 1581 aa38.8■■■■□ 3.8
HLA-L-209ENST00000420110 DNMBPQ6XZF7 1577 aa38.79■■■■□ 3.8
HLA-L-209ENST00000420110 ARHGEF11O15085 1522 aa38.75■■■■□ 3.79
HLA-L-209ENST00000420110 TARBP1Q13395 1621 aaKnown RBP38.66■■■■□ 3.78
HLA-L-209ENST00000420110 AQRO60306 1485 aaKnown RBP eCLIP38.63■■■■□ 3.77
HLA-L-209ENST00000420110 CHD1O14646 1710 aa38.58■■■■□ 3.77
HLA-L-209ENST00000420110 POLA1P09884 1462 aaPredicted RBP38.55■■■■□ 3.76
HLA-L-209ENST00000420110 CYB5RLQ6IPT4 315 aa38.46■■■■□ 3.75
HLA-L-209ENST00000420110 RAD54L2Q9Y4B4 1467 aa38.43■■■■□ 3.74
HLA-L-209ENST00000420110 FBLN2P98095 1184 aa38.43■■■■□ 3.74
HLA-L-209ENST00000420110 ARAP1Q96P48 1450 aa38.35■■■■□ 3.73
HLA-L-209ENST00000420110 SOGA1O94964 1423 aa38.35■■■■□ 3.73
HLA-L-209ENST00000420110 TDRD9Q8NDG6 1382 aaKnown RBP38.33■■■■□ 3.73
HLA-L-209ENST00000420110 FGD5Q6ZNL6 1462 aa38.27■■■■□ 3.72
HLA-L-209ENST00000420110 SNAPC4Q5SXM2 1469 aa38.24■■■■□ 3.71
HLA-L-209ENST00000420110 CUX1P39880 1505 aa38.19■■■■□ 3.7
HLA-L-209ENST00000420110 WDR97A6NE52 1622 aa38.19■■■■□ 3.7
HLA-L-209ENST00000420110 TRHP20396 242 aaPredicted RBP38.14■■■■□ 3.7
HLA-L-209ENST00000420110 CLASP1Q7Z460 1538 aa38.12■■■■□ 3.69
HLA-L-209ENST00000420110 MAGI1Q96QZ7 1491 aaPredicted RBP38.09■■■■□ 3.69
HLA-L-209ENST00000420110 CHMP7Q8WUX9 453 aaPredicted RBP38.06■■■■□ 3.68
HLA-L-209ENST00000420110 GRIN2BQ13224 1484 aa38.05■■■■□ 3.68
HLA-L-209ENST00000420110 SYNJ1O43426 1573 aa38.05■■■■□ 3.68
HLA-L-209ENST00000420110 SYNJ2O15056 1496 aa37.97■■■■□ 3.67
HLA-L-209ENST00000420110 PBRM1Q86U86 1689 aa37.92■■■■□ 3.66
HLA-L-209ENST00000420110 GAPVD1Q14C86 1478 aa37.88■■■■□ 3.65
HLA-L-209ENST00000420110 ABCA5Q8WWZ7 1642 aa37.79■■■■□ 3.64
HLA-L-209ENST00000420110 ABCA10Q8WWZ4 1543 aa37.79■■■■□ 3.64
HLA-L-209ENST00000420110 SUPT5HO00267 1087 aaKnown RBP37.64■■■■□ 3.62
HLA-L-209ENST00000420110 GRIN2AQ12879 1464 aa37.58■■■■□ 3.61
HLA-L-209ENST00000420110 WRNQ14191 1432 aaPredicted RBP eCLIP37.55■■■■□ 3.6
HLA-L-209ENST00000420110 ERCC6L2Q5T890 1561 aa37.55■■■■□ 3.6
HLA-L-209ENST00000420110 ADAMTS12P58397 1594 aa37.54■■■■□ 3.6
HLA-L-209ENST00000420110 CEP170Q5SW79 1584 aa37.49■■■■□ 3.59
HLA-L-209ENST00000420110 BIVM-ERCC5R4GMW8 1640 aa37.48■■■■□ 3.59
HLA-L-209ENST00000420110 TOP2BQ02880 1626 aa37.47■■■■□ 3.59
HLA-L-209ENST00000420110 NUP160Q12769 1436 aa37.45■■■■□ 3.59
HLA-L-209ENST00000420110 FHAD1B1AJZ9 1412 aa37.37■■■■□ 3.57
HLA-L-209ENST00000420110 SHROOM2Q13796 1616 aa37.34■■■■□ 3.57
HLA-L-209ENST00000420110 ERICH3Q5RHP9 1530 aa37.31■■■■□ 3.56
HLA-L-209ENST00000420110 AEBP2Q6ZN18 517 aaPredicted RBP37.25■■■■□ 3.55
HLA-L-209ENST00000420110 PRG4Q92954 1404 aaPredicted RBP37.12■■■■□ 3.53
HLA-L-209ENST00000420110 JPH4Q96JJ6 628 aa37.05■■■■□ 3.52
HLA-L-209ENST00000420110 KIF13AQ9H1H9 1805 aa37.03■■■■□ 3.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms