RNA–Protein interactions for RNA: ENST00000369598.5

PHTF1-202, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 5 BASIC

Gene PHTF1, Length 3,000 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-202ENST00000369598 NISCHQ9Y2I1 1504 aa32.46■■■□□ 2.79
PHTF1-202ENST00000369598 CCDC180Q9P1Z9 1646 aa28.09■■■□□ 2.09
PHTF1-202ENST00000369598 ZCCHC6Q5VYS8 1495 aaKnown RBP27.27■■□□□ 1.96
PHTF1-202ENST00000369598 DCAF8L2P0C7V8 631 aa27.08■■□□□ 1.93
PHTF1-202ENST00000369598 SHROOM4Q9ULL8 1493 aa26.85■■□□□ 1.89
PHTF1-202ENST00000369598 DCAF1Q9Y4B6 1507 aa26.75■■□□□ 1.87
PHTF1-202ENST00000369598 ABCC9O60706 1549 aa26.6■■□□□ 1.85
PHTF1-202ENST00000369598 MYO15BQ96JP2 1530 aa26.34■■□□□ 1.81
PHTF1-202ENST00000369598 NACADO15069 1562 aa26.19■■□□□ 1.78
PHTF1-202ENST00000369598 SCRIBQ14160 1630 aa26.01■■□□□ 1.75
PHTF1-202ENST00000369598 SUPT5HO00267 1087 aaKnown RBP25.99■■□□□ 1.75
PHTF1-202ENST00000369598 RB1CC1Q8TDY2 1594 aa25.94■■□□□ 1.74
PHTF1-202ENST00000369598 PPARGC1BQ86YN6 1023 aaKnown RBP25.46■■□□□ 1.67
PHTF1-202ENST00000369598 UNC13AQ9UPW8 1703 aa25.38■■□□□ 1.65
PHTF1-202ENST00000369598 HRCP23327 699 aa25.36■■□□□ 1.65
PHTF1-202ENST00000369598 RSF1Q96T23 1441 aaPredicted RBP25.31■■□□□ 1.64
PHTF1-202ENST00000369598 CECR2Q9BXF3 1484 aa25.27■■□□□ 1.64
PHTF1-202ENST00000369598 PCGF6Q9BYE7 350 aa25.26■■□□□ 1.63
PHTF1-202ENST00000369598 PABPN1Q86U42 306 aaKnown RBP eCLIP25.23■■□□□ 1.63
PHTF1-202ENST00000369598 BICRAQ9NZM4 1560 aa25.13■■□□□ 1.61
PHTF1-202ENST00000369598 MROH2BQ7Z745 1585 aa25.12■■□□□ 1.61
PHTF1-202ENST00000369598 BAZ1AQ9NRL2 1556 aaPredicted RBP25.04■■□□□ 1.6
PHTF1-202ENST00000369598 WIZO95785 1651 aa24.93■■□□□ 1.58
PHTF1-202ENST00000369598 CHIC1Q5VXU3 224 aa24.9■■□□□ 1.58
PHTF1-202ENST00000369598 SMARCA4P51532 1647 aa24.89■■□□□ 1.57
PHTF1-202ENST00000369598 TOP2AP11388 1531 aaKnown RBP24.61■■□□□ 1.53
PHTF1-202ENST00000369598 PEG3Q9GZU2 1588 aa24.51■■□□□ 1.51
PHTF1-202ENST00000369598 ATAD2BQ9ULI0 1458 aa24.47■■□□□ 1.51
PHTF1-202ENST00000369598 CCDC88BA6NC98 1476 aa24.45■■□□□ 1.5
PHTF1-202ENST00000369598 SMARCA2P51531 1590 aa24.43■■□□□ 1.5
PHTF1-202ENST00000369598 EIF4G1Q04637 1599 aaKnown RBP24.39■■□□□ 1.49
PHTF1-202ENST00000369598 TRIM41Q8WV44 630 aa24.38■■□□□ 1.49
PHTF1-202ENST00000369598 BAZ1BQ9UIG0 1483 aaKnown RBP24.37■■□□□ 1.49
PHTF1-202ENST00000369598 PELP1Q8IZL8 1130 aaKnown RBP24.34■■□□□ 1.49
PHTF1-202ENST00000369598 LOC105371045A0A1W2PR82 267 aa24.34■■□□□ 1.49
PHTF1-202ENST00000369598 SCAF1Q9H7N4 1312 aaKnown RBP24.33■■□□□ 1.48
PHTF1-202ENST00000369598 NCAPD3P42695 1498 aa24.21■■□□□ 1.47
PHTF1-202ENST00000369598 HMGXB3Q12766 1538 aa24.12■■□□□ 1.45
PHTF1-202ENST00000369598 FAM9AQ8IZU1 332 aaPredicted RBP24.02■■□□□ 1.44
PHTF1-202ENST00000369598 ABCC8Q09428 1581 aa24.01■■□□□ 1.43
PHTF1-202ENST00000369598 CC2D2AQ9P2K1 1620 aa23.99■■□□□ 1.43
PHTF1-202ENST00000369598 EHMT2Q96KQ7 1210 aa23.95■■□□□ 1.42
PHTF1-202ENST00000369598 TRIM26Q12899 539 aaPredicted RBP23.89■■□□□ 1.41
PHTF1-202ENST00000369598 WRNQ14191 1432 aaPredicted RBP eCLIP23.84■■□□□ 1.41
PHTF1-202ENST00000369598 CFTRP13569 1480 aa23.73■■□□□ 1.39
PHTF1-202ENST00000369598 SYNJ1O43426 1573 aa23.67■■□□□ 1.38
PHTF1-202ENST00000369598 NEUROD1Q13562 356 aa23.66■■□□□ 1.38
PHTF1-202ENST00000369598 CADPSQ9ULU8 1353 aa23.66■■□□□ 1.38
PHTF1-202ENST00000369598 SOGA1O94964 1423 aa23.65■■□□□ 1.38
PHTF1-202ENST00000369598 GTF3C3Q9Y5Q9 886 aa23.6■■□□□ 1.37
PHTF1-202ENST00000369598 EEA1Q15075 1411 aa23.56■■□□□ 1.36
PHTF1-202ENST00000369598 CSRNP3Q8WYN3 585 aa23.55■■□□□ 1.36
PHTF1-202ENST00000369598 RUSC2Q8N2Y8 1516 aa23.54■■□□□ 1.36
PHTF1-202ENST00000369598 TOP2BQ02880 1626 aa23.54■■□□□ 1.36
PHTF1-202ENST00000369598 ACIN1Q9UKV3 1341 aaKnown RBP23.51■■□□□ 1.35
PHTF1-202ENST00000369598 PRDM2Q13029 1718 aa23.51■■□□□ 1.35
PHTF1-202ENST00000369598 ZEB1P37275 1124 aaPredicted RBP23.5■■□□□ 1.35
PHTF1-202ENST00000369598 DNAJC5BQ9UF47 199 aa23.47■■□□□ 1.35
PHTF1-202ENST00000369598 BIVM-ERCC5R4GMW8 1640 aa23.47■■□□□ 1.35
PHTF1-202ENST00000369598 CUX1P39880 1505 aa23.46■■□□□ 1.35
PHTF1-202ENST00000369598 NESP48681 1621 aa23.4■■□□□ 1.34
PHTF1-202ENST00000369598 FANCD2Q9BXW9 1451 aa23.39■■□□□ 1.33
PHTF1-202ENST00000369598 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.37■■□□□ 1.33
PHTF1-202ENST00000369598 UBTFP17480 764 aaKnown RBP23.35■■□□□ 1.33
PHTF1-202ENST00000369598 YTHDC1Q96MU7 727 aaKnown RBP23.34■■□□□ 1.33
PHTF1-202ENST00000369598 LAMC3Q9Y6N6 1575 aa23.32■■□□□ 1.32
PHTF1-202ENST00000369598 TTBK1Q5TCY1 1321 aaPredicted RBP23.3■■□□□ 1.32
PHTF1-202ENST00000369598 GOLGA3Q08378 1498 aa23.27■■□□□ 1.32
PHTF1-202ENST00000369598 TNIKQ9UKE5 1360 aa23.27■■□□□ 1.32
PHTF1-202ENST00000369598 CEP164Q9UPV0 1460 aa23.25■■□□□ 1.31
PHTF1-202ENST00000369598 MYT1Q01538 1121 aa23.25■■□□□ 1.31
PHTF1-202ENST00000369598 KIF27Q86VH2 1401 aa23.22■■□□□ 1.31
PHTF1-202ENST00000369598 PDS5BQ9NTI5 1447 aa23.22■■□□□ 1.31
PHTF1-202ENST00000369598 CCER1Q8TC90 406 aaPredicted RBP23.21■■□□□ 1.31
PHTF1-202ENST00000369598 KIF21BO75037 1637 aa23.19■■□□□ 1.3
PHTF1-202ENST00000369598 FGD5Q6ZNL6 1462 aa23.19■■□□□ 1.3
PHTF1-202ENST00000369598 CENPBP07199 599 aaPredicted RBP23.17■■□□□ 1.3
PHTF1-202ENST00000369598 DIEXFQ68CQ4 756 aaKnown RBP23.17■■□□□ 1.3
PHTF1-202ENST00000369598 CEP162Q5TB80 1403 aa23.16■■□□□ 1.3
PHTF1-202ENST00000369598 DNMBPQ6XZF7 1577 aa23.15■■□□□ 1.3
PHTF1-202ENST00000369598 TOPBP1Q92547 1522 aa23.13■■□□□ 1.29
PHTF1-202ENST00000369598 CUX2O14529 1486 aa23.12■■□□□ 1.29
PHTF1-202ENST00000369598 RAPGEF2Q9Y4G8 1499 aa23.12■■□□□ 1.29
PHTF1-202ENST00000369598 PRXQ9BXM0 1461 aa23.07■■□□□ 1.28
PHTF1-202ENST00000369598 URB2Q14146 1524 aaKnown RBP23.05■■□□□ 1.28
PHTF1-202ENST00000369598 POLA1P09884 1462 aaPredicted RBP23.04■■□□□ 1.28
PHTF1-202ENST00000369598 KIF21AQ7Z4S6 1674 aa23.03■■□□□ 1.28
PHTF1-202ENST00000369598 RAD54L2Q9Y4B4 1467 aa23.03■■□□□ 1.28
PHTF1-202ENST00000369598 IGF1RP08069 1367 aa23.02■■□□□ 1.28
PHTF1-202ENST00000369598 ERICH3Q5RHP9 1530 aa23■■□□□ 1.27
PHTF1-202ENST00000369598 RANGAP1P46060 587 aaPredicted RBP22.98■■□□□ 1.27
PHTF1-202ENST00000369598 ABCA10Q8WWZ4 1543 aa22.95■■□□□ 1.27
PHTF1-202ENST00000369598 CLIP1P30622 1438 aa22.95■■□□□ 1.26
PHTF1-202ENST00000369598 CARMIL1Q5VZK9 1371 aa22.92■■□□□ 1.26
PHTF1-202ENST00000369598 MRC2Q9UBG0 1479 aa22.86■■□□□ 1.25
PHTF1-202ENST00000369598 TDRD9Q8NDG6 1382 aaKnown RBP22.84■■□□□ 1.25
PHTF1-202ENST00000369598 ERCC6Q03468 1493 aa22.79■■□□□ 1.24
PHTF1-202ENST00000369598 WDR97A6NE52 1622 aa22.77■■□□□ 1.23
PHTF1-202ENST00000369598 GAPVD1Q14C86 1478 aa22.75■■□□□ 1.23
PHTF1-202ENST00000369598 VPS8Q8N3P4 1428 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms