Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
CHPFQ8IZ52 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC24.1■■□□□ 1.45
CHPFQ8IZ52 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CHPFQ8IZ52 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC24.09■■□□□ 1.45
CHPFQ8IZ52 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CHPFQ8IZ52 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CHPFQ8IZ52 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CHPFQ8IZ52 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
CHPFQ8IZ52 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CHPFQ8IZ52 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
CHPFQ8IZ52 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CHPFQ8IZ52 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC24.08■■□□□ 1.45
CHPFQ8IZ52 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC24.08■■□□□ 1.45
CHPFQ8IZ52 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC24.08■■□□□ 1.45
CHPFQ8IZ52 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CHPFQ8IZ52 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC24.07■■□□□ 1.44
CHPFQ8IZ52 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CHPFQ8IZ52 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC24.07■■□□□ 1.44
CHPFQ8IZ52 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC24.07■■□□□ 1.44
CHPFQ8IZ52 AC092028.1-203ENST00000608262 953 ntBASIC24.07■■□□□ 1.44
CHPFQ8IZ52 AC011551.1-201ENST00000614101 683 ntBASIC24.07■■□□□ 1.44
CHPFQ8IZ52 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC24.06■■□□□ 1.44
CHPFQ8IZ52 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC24.06■■□□□ 1.44
CHPFQ8IZ52 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC24.06■■□□□ 1.44
CHPFQ8IZ52 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CHPFQ8IZ52 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC24.06■■□□□ 1.44
CHPFQ8IZ52 GAK-223ENST00000628912 497 ntTSL 5 BASIC24.06■■□□□ 1.44
CHPFQ8IZ52 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC24.06■■□□□ 1.44
CHPFQ8IZ52 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CHPFQ8IZ52 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CHPFQ8IZ52 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC24.06■■□□□ 1.44
CHPFQ8IZ52 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CHPFQ8IZ52 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CHPFQ8IZ52 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CHPFQ8IZ52 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
CHPFQ8IZ52 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CHPFQ8IZ52 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC24.05■■□□□ 1.44
CHPFQ8IZ52 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CHPFQ8IZ52 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CHPFQ8IZ52 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC24.04■■□□□ 1.44
CHPFQ8IZ52 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
CHPFQ8IZ52 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC24.04■■□□□ 1.44
CHPFQ8IZ52 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC24.03■■□□□ 1.44
CHPFQ8IZ52 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CHPFQ8IZ52 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CHPFQ8IZ52 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
CHPFQ8IZ52 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
CHPFQ8IZ52 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC24.03■■□□□ 1.44
CHPFQ8IZ52 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
CHPFQ8IZ52 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CHPFQ8IZ52 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
CHPFQ8IZ52 AC019069.1-201ENST00000610008 1333 ntBASIC24.03■■□□□ 1.44
CHPFQ8IZ52 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CHPFQ8IZ52 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CHPFQ8IZ52 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC24.02■■□□□ 1.44
CHPFQ8IZ52 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CHPFQ8IZ52 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC24.02■■□□□ 1.44
CHPFQ8IZ52 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
CHPFQ8IZ52 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
CHPFQ8IZ52 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CHPFQ8IZ52 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CHPFQ8IZ52 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CHPFQ8IZ52 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CHPFQ8IZ52 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CHPFQ8IZ52 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CHPFQ8IZ52 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
CHPFQ8IZ52 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC24.01■■□□□ 1.43
CHPFQ8IZ52 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
CHPFQ8IZ52 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
CHPFQ8IZ52 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC24■■□□□ 1.43
CHPFQ8IZ52 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CHPFQ8IZ52 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC24■■□□□ 1.43
CHPFQ8IZ52 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC24■■□□□ 1.43
CHPFQ8IZ52 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC24■■□□□ 1.43
CHPFQ8IZ52 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.99■■□□□ 1.43
CHPFQ8IZ52 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.99■■□□□ 1.43
CHPFQ8IZ52 SSSCA1-AS1-201ENST00000567594 614 ntBASIC23.99■■□□□ 1.43
CHPFQ8IZ52 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CHPFQ8IZ52 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CHPFQ8IZ52 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CHPFQ8IZ52 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.98■■□□□ 1.43
CHPFQ8IZ52 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
CHPFQ8IZ52 FOXO3B-201ENST00000395675 1928 ntBASIC23.98■■□□□ 1.43
CHPFQ8IZ52 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC23.97■■□□□ 1.43
CHPFQ8IZ52 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
CHPFQ8IZ52 PEMT-206ENST00000435340 960 ntTSL 5 BASIC23.97■■□□□ 1.43
CHPFQ8IZ52 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
CHPFQ8IZ52 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.97■■□□□ 1.43
CHPFQ8IZ52 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC23.97■■□□□ 1.43
CHPFQ8IZ52 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.96■■□□□ 1.43
CHPFQ8IZ52 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CHPFQ8IZ52 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CHPFQ8IZ52 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.96■■□□□ 1.43
CHPFQ8IZ52 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.96■■□□□ 1.43
CHPFQ8IZ52 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CHPFQ8IZ52 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CHPFQ8IZ52 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CHPFQ8IZ52 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
CHPFQ8IZ52 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CHPFQ8IZ52 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms