Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC35.11■■■■□ 3.21
CHPFQ8IZ52 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC34.41■■■■□ 3.1
CHPFQ8IZ52 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC34.12■■■■□ 3.05
CHPFQ8IZ52 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC33.97■■■■□ 3.03
CHPFQ8IZ52 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC33.95■■■■□ 3.03
CHPFQ8IZ52 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC33.89■■■■□ 3.02
CHPFQ8IZ52 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC33.85■■■■□ 3.01
CHPFQ8IZ52 AL356512.1-201ENST00000607453 1739 ntBASIC33.72■■■□□ 2.99
CHPFQ8IZ52 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC33.03■■■□□ 2.88
CHPFQ8IZ52 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC32.9■■■□□ 2.86
CHPFQ8IZ52 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC32.87■■■□□ 2.85
CHPFQ8IZ52 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC32.83■■■□□ 2.85
CHPFQ8IZ52 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC32.79■■■□□ 2.84
CHPFQ8IZ52 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC32.77■■■□□ 2.84
CHPFQ8IZ52 HES6-203ENST00000409160 1600 ntTSL 2 BASIC32.72■■■□□ 2.83
CHPFQ8IZ52 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC32.53■■■□□ 2.8
CHPFQ8IZ52 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC32.5■■■□□ 2.79
CHPFQ8IZ52 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
CHPFQ8IZ52 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC32.45■■■□□ 2.78
CHPFQ8IZ52 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC32.3■■■□□ 2.76
CHPFQ8IZ52 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
CHPFQ8IZ52 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
CHPFQ8IZ52 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC32.14■■■□□ 2.74
CHPFQ8IZ52 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
CHPFQ8IZ52 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
CHPFQ8IZ52 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC31.9■■■□□ 2.7
CHPFQ8IZ52 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
CHPFQ8IZ52 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC31.84■■■□□ 2.69
CHPFQ8IZ52 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CHPFQ8IZ52 INO80B-203ENST00000409917 796 ntTSL 2 BASIC31.7■■■□□ 2.67
CHPFQ8IZ52 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CHPFQ8IZ52 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC31.54■■■□□ 2.64
CHPFQ8IZ52 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
CHPFQ8IZ52 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC31.3■■■□□ 2.6
CHPFQ8IZ52 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
CHPFQ8IZ52 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC31.25■■■□□ 2.59
CHPFQ8IZ52 AC015813.7-201ENST00000623294 581 ntBASIC31.25■■■□□ 2.59
CHPFQ8IZ52 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
CHPFQ8IZ52 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC31.2■■■□□ 2.59
CHPFQ8IZ52 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC31.2■■■□□ 2.59
CHPFQ8IZ52 AC006077.2-201ENST00000623591 457 ntBASIC31.2■■■□□ 2.59
CHPFQ8IZ52 ZNRF2P1-201ENST00000441407 443 ntBASIC31.15■■■□□ 2.58
CHPFQ8IZ52 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CHPFQ8IZ52 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC31.08■■■□□ 2.57
CHPFQ8IZ52 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC31.05■■■□□ 2.56
CHPFQ8IZ52 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC31.01■■■□□ 2.56
CHPFQ8IZ52 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
CHPFQ8IZ52 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
CHPFQ8IZ52 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC30.8■■■□□ 2.52
CHPFQ8IZ52 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
CHPFQ8IZ52 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC30.76■■■□□ 2.52
CHPFQ8IZ52 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CHPFQ8IZ52 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
CHPFQ8IZ52 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC30.54■■■□□ 2.48
CHPFQ8IZ52 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC30.53■■■□□ 2.48
CHPFQ8IZ52 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC30.46■■■□□ 2.47
CHPFQ8IZ52 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC30.41■■■□□ 2.46
CHPFQ8IZ52 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC30.4■■■□□ 2.46
CHPFQ8IZ52 AP002365.1-201ENST00000603448 772 ntBASIC30.39■■■□□ 2.46
CHPFQ8IZ52 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CHPFQ8IZ52 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
CHPFQ8IZ52 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CHPFQ8IZ52 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC30.32■■■□□ 2.44
CHPFQ8IZ52 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC30.32■■■□□ 2.44
CHPFQ8IZ52 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
CHPFQ8IZ52 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC30.29■■■□□ 2.44
CHPFQ8IZ52 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
CHPFQ8IZ52 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
CHPFQ8IZ52 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
CHPFQ8IZ52 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC30.26■■■□□ 2.43
CHPFQ8IZ52 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CHPFQ8IZ52 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC30.2■■■□□ 2.43
CHPFQ8IZ52 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC30.2■■■□□ 2.43
CHPFQ8IZ52 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC30.19■■■□□ 2.42
CHPFQ8IZ52 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC30.19■■■□□ 2.42
CHPFQ8IZ52 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC30.16■■■□□ 2.42
CHPFQ8IZ52 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
CHPFQ8IZ52 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC30.14■■■□□ 2.42
CHPFQ8IZ52 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC30.14■■■□□ 2.42
CHPFQ8IZ52 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC30.1■■■□□ 2.41
CHPFQ8IZ52 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC30.07■■■□□ 2.4
CHPFQ8IZ52 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
CHPFQ8IZ52 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CHPFQ8IZ52 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC30.04■■■□□ 2.4
CHPFQ8IZ52 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC30.03■■■□□ 2.4
CHPFQ8IZ52 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC30.02■■■□□ 2.4
CHPFQ8IZ52 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC29.97■■■□□ 2.39
CHPFQ8IZ52 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC29.97■■■□□ 2.39
CHPFQ8IZ52 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC29.94■■■□□ 2.38
CHPFQ8IZ52 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC29.93■■■□□ 2.38
CHPFQ8IZ52 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC29.9■■■□□ 2.38
CHPFQ8IZ52 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
CHPFQ8IZ52 DYNLL1-208ENST00000550178 581 ntBASIC29.9■■■□□ 2.38
CHPFQ8IZ52 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
CHPFQ8IZ52 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC29.86■■■□□ 2.37
CHPFQ8IZ52 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
CHPFQ8IZ52 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC29.8■■■□□ 2.36
CHPFQ8IZ52 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
CHPFQ8IZ52 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC29.77■■■□□ 2.36
CHPFQ8IZ52 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
Retrieved 100 of 98,524 protein–RNA pairs in 7.8 ms