Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 POLR2E-212ENST00000614705 589 ntTSL 415.61■□□□□ 0.092e-10■■□□□ 12.7
RPS3P23396 LRP1-202ENST00000338962 2169 ntTSL 1 (best) BASIC10.94□□□□□ -0.661e-9■■□□□ 12.7
RPS3P23396 NPC1-207ENST00000588867 2000 ntTSL 514.34□□□□□ -0.116e-8■■□□□ 12.7
RPS3P23396 NPC1-212ENST00000591107 890 ntTSL 312.56□□□□□ -0.46e-8■■□□□ 12.7
RPS3P23396 NPC1-203ENST00000586150 571 ntTSL 312.35□□□□□ -0.436e-8■■□□□ 12.7
RPS3P23396 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.75□□□□□ -0.052e-6■■□□□ 12.7
RPS3P23396 YME1L1-209ENST00000613434 4127 ntTSL 2 BASIC9.82□□□□□ -0.842e-6■■□□□ 12.7
RPS3P23396 YME1L1-203ENST00000376016 3856 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.952e-6■■□□□ 12.7
RPS3P23396 YME1L1-201ENST00000326799 3994 ntTSL 1 (best) BASIC7.72□□□□□ -1.172e-6■■□□□ 12.7
RPS3P23396 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.24□□□□□ -0.133e-14■■□□□ 12.7
RPS3P23396 PPT2-254ENST00000493548 790 ntTSL 520.73■□□□□ 0.912e-6■■□□□ 12.7
RPS3P23396 PPT2-250ENST00000424499 722 ntTSL 318.98■□□□□ 0.632e-6■■□□□ 12.7
RPS3P23396 PPT2-249ENST00000414204 954 ntTSL 518.7■□□□□ 0.582e-6■■□□□ 12.7
RPS3P23396 PPT2-251ENST00000436118 633 ntTSL 417.91■□□□□ 0.462e-6■■□□□ 12.7
RPS3P23396 PPT2-253ENST00000478521 584 ntTSL 315.47■□□□□ 0.072e-6■■□□□ 12.7
RPS3P23396 EMC1-212ENST00000494770 779 ntTSL 511.82□□□□□ -0.524e-12■■□□□ 12.7
RPS3P23396 SPTLC1-201ENST00000262554 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.363e-6■■□□□ 12.7
RPS3P23396 SKP1-206ENST00000519321 692 ntTSL 322.18■■□□□ 1.142e-11■■□□□ 12.7
RPS3P23396 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.62e-11■■□□□ 12.7
RPS3P23396 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.23□□□□□ -1.892e-11■■□□□ 12.7
RPS3P23396 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.8□□□□□ -1.962e-11■■□□□ 12.7
RPS3P23396 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.67□□□□□ -1.982e-11■■□□□ 12.7
RPS3P23396 SKP1-201ENST00000328392 572 ntTSL 52.19□□□□□ -2.062e-11■■□□□ 12.7
RPS3P23396 SKP1-212ENST00000523966 899 ntTSL 32.19□□□□□ -2.062e-11■■□□□ 12.7
RPS3P23396 SKP1-207ENST00000520417 610 ntTSL 30.49□□□□□ -2.332e-11■■□□□ 12.7
RPS3P23396 SKP1-205ENST00000519054 654 ntTSL 30.38□□□□□ -2.352e-11■■□□□ 12.7
RPS3P23396 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.24□□□□□ -2.372e-11■■□□□ 12.7
RPS3P23396 IQGAP1-210ENST00000560218 544 ntTSL 53.05□□□□□ -1.923e-7■■□□□ 12.7
RPS3P23396 CALM3-209ENST00000597743 577 ntTSL 4 BASIC25.37■■□□□ 1.651e-7■■□□□ 12.7
RPS3P23396 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.57■□□□□ 0.721e-7■■□□□ 12.7
RPS3P23396 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.391e-7■■□□□ 12.7
RPS3P23396 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.82■□□□□ 0.281e-7■■□□□ 12.7
RPS3P23396 CALM3-206ENST00000594523 540 ntTSL 4 BASIC11.76□□□□□ -0.531e-7■■□□□ 12.7
RPS3P23396 CALM3-203ENST00000477244 696 ntTSL 311□□□□□ -0.651e-7■■□□□ 12.7
RPS3P23396 CALM3-210ENST00000597868 927 ntTSL 310.35□□□□□ -0.751e-7■■□□□ 12.7
RPS3P23396 RPL8-212ENST00000532702 745 ntTSL 215.01□□□□□ -0.011e-8■■□□□ 12.7
RPS3P23396 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.231e-11■■□□□ 12.7
RPS3P23396 RBM4-208ENST00000510173 782 ntTSL 313.7□□□□□ -0.221e-11■■□□□ 12.7
RPS3P23396 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.241e-11■■□□□ 12.7
RPS3P23396 RBM4-205ENST00000409406 2321 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.41e-11■■□□□ 12.7
RPS3P23396 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC12.56□□□□□ -0.41e-11■■□□□ 12.7
RPS3P23396 RBM4-207ENST00000506523 654 ntTSL 3 BASIC12.56□□□□□ -0.41e-11■■□□□ 12.7
RPS3P23396 RBM4-202ENST00000396053 1337 ntTSL 2 BASIC12.42□□□□□ -0.421e-11■■□□□ 12.7
RPS3P23396 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC11.97□□□□□ -0.491e-11■■□□□ 12.7
RPS3P23396 RBM4-210ENST00000528039 764 ntTSL 310.32□□□□□ -0.761e-11■■□□□ 12.7
RPS3P23396 RBM4-213ENST00000578778 582 ntTSL 4 BASIC7.5□□□□□ -1.211e-11■■□□□ 12.7
RPS3P23396 OS9-212ENST00000550202 787 ntTSL 213.97□□□□□ -0.171e-9■■□□□ 12.7
RPS3P23396 COL9A3-202ENST00000452372 596 ntTSL 519.5■□□□□ 0.716e-12■■□□□ 12.7
RPS3P23396 MARS-202ENST00000447721 1328 ntTSL 218.22■□□□□ 0.516e-9■■□□□ 12.7
RPS3P23396 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.711e-6■■□□□ 12.7
RPS3P23396 MFSD12-211ENST00000589995 777 ntTSL 317.39■□□□□ 0.371e-6■■□□□ 12.7
RPS3P23396 SLC30A10-201ENST00000356609 3650 ntTSL 1 (best)15□□□□□ -0.011e-6■■□□□ 12.7
RPS3P23396 SLC30A10-204ENST00000484239 1902 ntTSL 27.91□□□□□ -1.141e-6■■□□□ 12.7
RPS3P23396 COL18A1-207ENST00000473212 2515 ntTSL 220.53■□□□□ 0.885e-25■■□□□ 12.7
RPS3P23396 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.194e-8■■□□□ 12.7
RPS3P23396 FUS-213ENST00000570090 544 ntTSL 216.69■□□□□ 0.261e-23■■□□□ 12.7
RPS3P23396 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.032e-6■■□□□ 12.7
RPS3P23396 PTPRS-206ENST00000588552 5443 ntTSL 1 (best)14.94□□□□□ -0.022e-6■■□□□ 12.7
RPS3P23396 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.332e-6■■□□□ 12.7
RPS3P23396 PTPRS-202ENST00000353284 4518 ntTSL 5 BASIC11.62□□□□□ -0.552e-6■■□□□ 12.7
RPS3P23396 PTPRS-201ENST00000262963 4766 ntTSL 5 BASIC11.6□□□□□ -0.552e-6■■□□□ 12.7
RPS3P23396 PTPRS-210ENST00000592099 4766 ntTSL 1 (best) BASIC11.6□□□□□ -0.552e-6■■□□□ 12.7
RPS3P23396 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.533e-12■■□□□ 12.7
RPS3P23396 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.338e-6■■□□□ 12.7
RPS3P23396 CDC34-203ENST00000586788 900 ntTSL 223.35■■□□□ 1.333e-12■■□□□ 12.7
RPS3P23396 CDC34-205ENST00000606065 1062 ntTSL 521.69■■□□□ 1.068e-6■■□□□ 12.7
RPS3P23396 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.5■■□□□ 1.034e-8■■□□□ 12.7
RPS3P23396 PSMC5-203ENST00000578570 1680 ntTSL 221.05■□□□□ 0.964e-8■■□□□ 12.7
RPS3P23396 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.31■□□□□ 0.841e-6■■□□□ 12.7
RPS3P23396 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.688e-6■■□□□ 12.7
RPS3P23396 PSMC5-210ENST00000581764 2107 ntTSL 518.43■□□□□ 0.544e-8■■□□□ 12.7
RPS3P23396 CDC34-202ENST00000586283 1147 ntTSL 317.73■□□□□ 0.438e-6■■□□□ 12.7
RPS3P23396 TMEM161A-209ENST00000587985 1754 ntTSL 517.6■□□□□ 0.411e-6■■□□□ 12.7
RPS3P23396 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.48e-6■■□□□ 12.7
RPS3P23396 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.314e-8■■□□□ 12.7
RPS3P23396 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.38e-6■■□□□ 12.7
RPS3P23396 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.38e-6■■□□□ 12.7
RPS3P23396 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.85■□□□□ 0.294e-8■■□□□ 12.7
RPS3P23396 TMEM161A-205ENST00000587406 1923 ntTSL 516.72■□□□□ 0.271e-6■■□□□ 12.7
RPS3P23396 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.251e-6■■□□□ 12.7
RPS3P23396 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.252e-10■■□□□ 12.7
RPS3P23396 TMEM161A-210ENST00000589448 1799 ntTSL 516.56■□□□□ 0.241e-6■■□□□ 12.7
RPS3P23396 TMEM161A-213ENST00000591443 657 ntTSL 216.47■□□□□ 0.232e-6■■□□□ 12.7
RPS3P23396 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.198e-6■■□□□ 12.7
RPS3P23396 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.148e-6■■□□□ 12.7
RPS3P23396 MBOAT7-212ENST00000494142 3039 ntTSL 1 (best)15.78■□□□□ 0.124e-8■■□□□ 12.7
RPS3P23396 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.118e-6■■□□□ 12.7
RPS3P23396 AMFR-208ENST00000566757 1844 nt15.64■□□□□ 0.092e-10■■□□□ 12.7
RPS3P23396 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.63■□□□□ 0.091e-6■■□□□ 12.7
RPS3P23396 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.014e-8■■□□□ 12.7
RPS3P23396 CDC25C-206ENST00000510119 867 ntTSL 314.95□□□□□ -0.028e-6■■□□□ 12.7
RPS3P23396 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.038e-6■■□□□ 12.7
RPS3P23396 PSMC5-213ENST00000582130 828 ntTSL 314.87□□□□□ -0.034e-8■■□□□ 12.7
RPS3P23396 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.69□□□□□ -0.064e-8■■□□□ 12.7
RPS3P23396 AAAS-205ENST00000546572 582 ntTSL 214.43□□□□□ -0.18e-6■■□□□ 12.7
RPS3P23396 PSMC5-217ENST00000584536 804 ntTSL 514.26□□□□□ -0.134e-8■■□□□ 12.7
RPS3P23396 PSMC5-219ENST00000584880 597 ntTSL 313.92□□□□□ -0.184e-8■■□□□ 12.7
RPS3P23396 CDC34-207ENST00000607527 357 ntTSL 513.69□□□□□ -0.228e-6■■□□□ 12.7
RPS3P23396 RNF10-213ENST00000539486 321 ntTSL 413.63□□□□□ -0.234e-8■■□□□ 12.7
RPS3P23396 PSMC5-220ENST00000585123 899 ntTSL 513.6□□□□□ -0.234e-8■■□□□ 12.7
Retrieved 100 of 24,271 protein–RNA pairs in 145.4 ms