RNA–Protein interactions for RNA: ENST00000597868.5

CALM3-210, Transcript of calmodulin 3, humanhuman

TSL 3

Gene CALM3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3-210ENST00000597868 NISCHQ9Y2I1 1504 aa26.66■■□□□ 1.86
CALM3-210ENST00000597868 CCDC180Q9P1Z9 1646 aa23.88■■□□□ 1.41
CALM3-210ENST00000597868 ABCC9O60706 1549 aa23.59■■□□□ 1.37
CALM3-210ENST00000597868 RB1CC1Q8TDY2 1594 aa22.51■■□□□ 1.19
CALM3-210ENST00000597868 NACADO15069 1562 aa22.38■■□□□ 1.17
CALM3-210ENST00000597868 DCAF8L2P0C7V8 631 aa22.34■■□□□ 1.17
CALM3-210ENST00000597868 UNC13AQ9UPW8 1703 aa22.3■■□□□ 1.16
CALM3-210ENST00000597868 ZCCHC6Q5VYS8 1495 aaKnown RBP22.2■■□□□ 1.14
CALM3-210ENST00000597868 MYO15BQ96JP2 1530 aa22.06■■□□□ 1.12
CALM3-210ENST00000597868 DCAF1Q9Y4B6 1507 aa21.95■■□□□ 1.1
CALM3-210ENST00000597868 PABPN1Q86U42 306 aaKnown RBP eCLIP21.94■■□□□ 1.1
CALM3-210ENST00000597868 BICRAQ9NZM4 1560 aa21.94■■□□□ 1.1
CALM3-210ENST00000597868 SCRIBQ14160 1630 aa21.89■■□□□ 1.09
CALM3-210ENST00000597868 DNAJC5BQ9UF47 199 aa21.77■■□□□ 1.08
CALM3-210ENST00000597868 SHROOM4Q9ULL8 1493 aa21.45■■□□□ 1.02
CALM3-210ENST00000597868 CC2D2AQ9P2K1 1620 aa21.34■■□□□ 1.01
CALM3-210ENST00000597868 EIF4G1Q04637 1599 aaKnown RBP21.34■■□□□ 1.01
CALM3-210ENST00000597868 CECR2Q9BXF3 1484 aa21.13■□□□□ 0.97
CALM3-210ENST00000597868 SMARCA4P51532 1647 aa20.83■□□□□ 0.93
CALM3-210ENST00000597868 BAZ1AQ9NRL2 1556 aaPredicted RBP20.68■□□□□ 0.9
CALM3-210ENST00000597868 ATAD2BQ9ULI0 1458 aa20.66■□□□□ 0.9
CALM3-210ENST00000597868 MROH2BQ7Z745 1585 aa20.63■□□□□ 0.89
CALM3-210ENST00000597868 SMARCA2P51531 1590 aa20.61■□□□□ 0.89
CALM3-210ENST00000597868 NCAPD3P42695 1498 aa20.59■□□□□ 0.89
CALM3-210ENST00000597868 HMGXB3Q12766 1538 aa20.58■□□□□ 0.88
CALM3-210ENST00000597868 PEG3Q9GZU2 1588 aa20.52■□□□□ 0.88
CALM3-210ENST00000597868 BAZ1BQ9UIG0 1483 aaKnown RBP20.5■□□□□ 0.87
CALM3-210ENST00000597868 WIZO95785 1651 aa20.49■□□□□ 0.87
CALM3-210ENST00000597868 NESP48681 1621 aa20.38■□□□□ 0.85
CALM3-210ENST00000597868 ERCC6Q03468 1493 aa20.28■□□□□ 0.84
CALM3-210ENST00000597868 KIF21AQ7Z4S6 1674 aa20.26■□□□□ 0.83
CALM3-210ENST00000597868 RSF1Q96T23 1441 aaPredicted RBP20.21■□□□□ 0.83
CALM3-210ENST00000597868 LAMC3Q9Y6N6 1575 aa20.19■□□□□ 0.82
CALM3-210ENST00000597868 THOC2Q8NI27 1593 aaKnown RBP20.15■□□□□ 0.82
CALM3-210ENST00000597868 TOP2AP11388 1531 aaKnown RBP20.13■□□□□ 0.81
CALM3-210ENST00000597868 CUX2O14529 1486 aa20.06■□□□□ 0.8
CALM3-210ENST00000597868 CADPSQ9ULU8 1353 aa19.98■□□□□ 0.79
CALM3-210ENST00000597868 PRDM2Q13029 1718 aa19.97■□□□□ 0.79
CALM3-210ENST00000597868 PDS5BQ9NTI5 1447 aa19.94■□□□□ 0.78
CALM3-210ENST00000597868 CCDC88BA6NC98 1476 aa19.86■□□□□ 0.77
CALM3-210ENST00000597868 CFTRP13569 1480 aa19.86■□□□□ 0.77
CALM3-210ENST00000597868 FANCD2Q9BXW9 1451 aa19.86■□□□□ 0.77
CALM3-210ENST00000597868 MRC2Q9UBG0 1479 aa19.86■□□□□ 0.77
CALM3-210ENST00000597868 CEP164Q9UPV0 1460 aa19.86■□□□□ 0.77
CALM3-210ENST00000597868 WDR62O43379 1518 aa19.84■□□□□ 0.77
CALM3-210ENST00000597868 URB2Q14146 1524 aaKnown RBP19.73■□□□□ 0.75
CALM3-210ENST00000597868 DNAJC5Q9H3Z4 198 aa19.61■□□□□ 0.73
CALM3-210ENST00000597868 SUPT5HO00267 1087 aaKnown RBP19.58■□□□□ 0.72
CALM3-210ENST00000597868 TOPBP1Q92547 1522 aa19.54■□□□□ 0.72
CALM3-210ENST00000597868 DNMBPQ6XZF7 1577 aa19.52■□□□□ 0.71
CALM3-210ENST00000597868 ZNF608Q9ULD9 1512 aaPredicted RBP19.46■□□□□ 0.71
CALM3-210ENST00000597868 EIF4G3O43432 1585 aaKnown RBP19.44■□□□□ 0.7
CALM3-210ENST00000597868 TARBP1Q13395 1621 aaKnown RBP19.4■□□□□ 0.7
CALM3-210ENST00000597868 IFT140Q96RY7 1462 aa19.39■□□□□ 0.69
CALM3-210ENST00000597868 CUX1P39880 1505 aa19.37■□□□□ 0.69
CALM3-210ENST00000597868 ABCC8Q09428 1581 aa19.36■□□□□ 0.69
CALM3-210ENST00000597868 POLA1P09884 1462 aaPredicted RBP19.36■□□□□ 0.69
CALM3-210ENST00000597868 RAD54L2Q9Y4B4 1467 aa19.32■□□□□ 0.68
CALM3-210ENST00000597868 CHD1O14646 1710 aa19.31■□□□□ 0.68
CALM3-210ENST00000597868 FGD5Q6ZNL6 1462 aa19.31■□□□□ 0.68
CALM3-210ENST00000597868 WDR97A6NE52 1622 aa19.29■□□□□ 0.68
CALM3-210ENST00000597868 AQRO60306 1485 aaKnown RBP eCLIP19.26■□□□□ 0.671e-10■■□□□ 12.6
CALM3-210ENST00000597868 PBRM1Q86U86 1689 aa19.21■□□□□ 0.67
CALM3-210ENST00000597868 SYNJ1O43426 1573 aa19.2■□□□□ 0.66
CALM3-210ENST00000597868 SOGA1O94964 1423 aa19.19■□□□□ 0.66
CALM3-210ENST00000597868 BIVM-ERCC5R4GMW8 1640 aa19.18■□□□□ 0.66
CALM3-210ENST00000597868 TDRD9Q8NDG6 1382 aaKnown RBP19.17■□□□□ 0.66
CALM3-210ENST00000597868 TOP2BQ02880 1626 aa19.12■□□□□ 0.65
CALM3-210ENST00000597868 SNAPC4Q5SXM2 1469 aa19.12■□□□□ 0.65
CALM3-210ENST00000597868 RIMBP3CA6NJZ7 1639 aa19.11■□□□□ 0.65
CALM3-210ENST00000597868 RIMBP3BA6NNM3 1639 aa19.11■□□□□ 0.65
CALM3-210ENST00000597868 ABCA5Q8WWZ7 1642 aa19.11■□□□□ 0.65
CALM3-210ENST00000597868 RIMBP3Q9UFD9 1639 aa19.11■□□□□ 0.65
CALM3-210ENST00000597868 OSCARQ8IYS5 282 aa19.09■□□□□ 0.65
CALM3-210ENST00000597868 TRIM41Q8WV44 630 aa19.06■□□□□ 0.64
CALM3-210ENST00000597868 WRNQ14191 1432 aaPredicted RBP eCLIP19.06■□□□□ 0.64
CALM3-210ENST00000597868 FBLN2P98095 1184 aa19.03■□□□□ 0.64
CALM3-210ENST00000597868 ABCA10Q8WWZ4 1543 aa19.03■□□□□ 0.64
CALM3-210ENST00000597868 GRIN2BQ13224 1484 aa19.01■□□□□ 0.63
CALM3-210ENST00000597868 GAPVD1Q14C86 1478 aa19.01■□□□□ 0.63
CALM3-210ENST00000597868 ARHGEF11O15085 1522 aa19■□□□□ 0.63
CALM3-210ENST00000597868 MAGI1Q96QZ7 1491 aaPredicted RBP18.98■□□□□ 0.63
CALM3-210ENST00000597868 ADAMTS12P58397 1594 aa18.95■□□□□ 0.62
CALM3-210ENST00000597868 CLASP1Q7Z460 1538 aa18.95■□□□□ 0.62
CALM3-210ENST00000597868 SYNJ2O15056 1496 aa18.92■□□□□ 0.62
CALM3-210ENST00000597868 CHMP7Q8WUX9 453 aaPredicted RBP18.86■□□□□ 0.61
CALM3-210ENST00000597868 ARAP1Q96P48 1450 aa18.84■□□□□ 0.61
CALM3-210ENST00000597868 CEP170Q5SW79 1584 aa18.84■□□□□ 0.61
CALM3-210ENST00000597868 GRIN2AQ12879 1464 aa18.82■□□□□ 0.6
CALM3-210ENST00000597868 ERICH3Q5RHP9 1530 aa18.8■□□□□ 0.6
CALM3-210ENST00000597868 ERCC6L2Q5T890 1561 aa18.77■□□□□ 0.6
CALM3-210ENST00000597868 CYB5RLQ6IPT4 315 aa18.73■□□□□ 0.59
CALM3-210ENST00000597868 FHAD1B1AJZ9 1412 aa18.73■□□□□ 0.59
CALM3-210ENST00000597868 RUSC2Q8N2Y8 1516 aa18.69■□□□□ 0.58
CALM3-210ENST00000597868 NUP160Q12769 1436 aa18.69■□□□□ 0.58
CALM3-210ENST00000597868 SHROOM2Q13796 1616 aa18.68■□□□□ 0.58
CALM3-210ENST00000597868 CUL7Q14999 1698 aa18.68■□□□□ 0.58
CALM3-210ENST00000597868 KIF27Q86VH2 1401 aa18.63■□□□□ 0.57
CALM3-210ENST00000597868 IGF1RP08069 1367 aa18.56■□□□□ 0.56
CALM3-210ENST00000597868 PRG4Q92954 1404 aaPredicted RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms