RNA–Protein interactions for RNA: ENST00000614705.4

POLR2E-212, Transcript of RNA polymerase II subunit E, humanhuman

TSL 4

Gene POLR2E, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-212ENST00000614705 NISCHQ9Y2I1 1504 aa39.06■■■■□ 3.84
POLR2E-212ENST00000614705 CCDC180Q9P1Z9 1646 aa34.88■■■■□ 3.17
POLR2E-212ENST00000614705 ABCC9O60706 1549 aa34.03■■■■□ 3.04
POLR2E-212ENST00000614705 RB1CC1Q8TDY2 1594 aa32.8■■■□□ 2.84
POLR2E-212ENST00000614705 NACADO15069 1562 aa32.75■■■□□ 2.83
POLR2E-212ENST00000614705 ZCCHC6Q5VYS8 1495 aaKnown RBP32.55■■■□□ 2.8
POLR2E-212ENST00000614705 MYO15BQ96JP2 1530 aa32.54■■■□□ 2.8
POLR2E-212ENST00000614705 DCAF8L2P0C7V8 631 aa32.51■■■□□ 2.79
POLR2E-212ENST00000614705 DCAF1Q9Y4B6 1507 aa32.37■■■□□ 2.77
POLR2E-212ENST00000614705 UNC13AQ9UPW8 1703 aa32.08■■■□□ 2.73
POLR2E-212ENST00000614705 BICRAQ9NZM4 1560 aa31.76■■■□□ 2.67
POLR2E-212ENST00000614705 SCRIBQ14160 1630 aa31.73■■■□□ 2.67
POLR2E-212ENST00000614705 PABPN1Q86U42 306 aaKnown RBP eCLIP31.69■■■□□ 2.66
POLR2E-212ENST00000614705 SHROOM4Q9ULL8 1493 aa31.53■■■□□ 2.64
POLR2E-212ENST00000614705 DNAJC5BQ9UF47 199 aa31.15■■■□□ 2.58
POLR2E-212ENST00000614705 EIF4G1Q04637 1599 aaKnown RBP30.94■■■□□ 2.54
POLR2E-212ENST00000614705 CC2D2AQ9P2K1 1620 aa30.83■■■□□ 2.53
POLR2E-212ENST00000614705 CECR2Q9BXF3 1484 aa30.61■■■□□ 2.49
POLR2E-212ENST00000614705 SMARCA4P51532 1647 aa30.36■■■□□ 2.45
POLR2E-212ENST00000614705 BAZ1AQ9NRL2 1556 aaPredicted RBP30.32■■■□□ 2.45
POLR2E-212ENST00000614705 SMARCA2P51531 1590 aa30.2■■■□□ 2.42
POLR2E-212ENST00000614705 NCAPD3P42695 1498 aa30.15■■■□□ 2.42
POLR2E-212ENST00000614705 ATAD2BQ9ULI0 1458 aa30.15■■■□□ 2.42
POLR2E-212ENST00000614705 HMGXB3Q12766 1538 aa30.08■■■□□ 2.41
POLR2E-212ENST00000614705 MROH2BQ7Z745 1585 aa30.07■■■□□ 2.4
POLR2E-212ENST00000614705 PEG3Q9GZU2 1588 aa30.07■■■□□ 2.4
POLR2E-212ENST00000614705 BAZ1BQ9UIG0 1483 aaKnown RBP29.94■■■□□ 2.38
POLR2E-212ENST00000614705 WIZO95785 1651 aa29.77■■■□□ 2.36
POLR2E-212ENST00000614705 RSF1Q96T23 1441 aaPredicted RBP29.68■■■□□ 2.34
POLR2E-212ENST00000614705 TOP2AP11388 1531 aaKnown RBP29.5■■■□□ 2.31
POLR2E-212ENST00000614705 LAMC3Q9Y6N6 1575 aa29.43■■■□□ 2.3
POLR2E-212ENST00000614705 NESP48681 1621 aa29.41■■■□□ 2.3
POLR2E-212ENST00000614705 ERCC6Q03468 1493 aa29.39■■■□□ 2.3
POLR2E-212ENST00000614705 CADPSQ9ULU8 1353 aa29.25■■■□□ 2.27
POLR2E-212ENST00000614705 PDS5BQ9NTI5 1447 aa29.19■■■□□ 2.26
POLR2E-212ENST00000614705 KIF21AQ7Z4S6 1674 aa29.16■■■□□ 2.26
POLR2E-212ENST00000614705 CUX2O14529 1486 aa29.12■■■□□ 2.25
POLR2E-212ENST00000614705 CFTRP13569 1480 aa29.09■■■□□ 2.25
POLR2E-212ENST00000614705 THOC2Q8NI27 1593 aaKnown RBP29.09■■■□□ 2.25
POLR2E-212ENST00000614705 CCDC88BA6NC98 1476 aa29.06■■■□□ 2.24
POLR2E-212ENST00000614705 PRDM2Q13029 1718 aa29.03■■■□□ 2.24
POLR2E-212ENST00000614705 CEP164Q9UPV0 1460 aa28.95■■■□□ 2.22
POLR2E-212ENST00000614705 FANCD2Q9BXW9 1451 aa28.94■■■□□ 2.22
POLR2E-212ENST00000614705 MRC2Q9UBG0 1479 aa28.91■■■□□ 2.22
POLR2E-212ENST00000614705 WDR62O43379 1518 aa28.84■■■□□ 2.21
POLR2E-212ENST00000614705 SUPT5HO00267 1087 aaKnown RBP28.81■■■□□ 2.2
POLR2E-212ENST00000614705 URB2Q14146 1524 aaKnown RBP28.64■■■□□ 2.18
POLR2E-212ENST00000614705 ABCC8Q09428 1581 aa28.51■■■□□ 2.15
POLR2E-212ENST00000614705 DNMBPQ6XZF7 1577 aa28.5■■■□□ 2.15
POLR2E-212ENST00000614705 TOPBP1Q92547 1522 aa28.48■■■□□ 2.15
POLR2E-212ENST00000614705 IFT140Q96RY7 1462 aa28.34■■■□□ 2.13
POLR2E-212ENST00000614705 CUX1P39880 1505 aa28.23■■■□□ 2.11
POLR2E-212ENST00000614705 POLA1P09884 1462 aaPredicted RBP28.23■■■□□ 2.11
POLR2E-212ENST00000614705 TARBP1Q13395 1621 aaKnown RBP28.2■■■□□ 2.1
POLR2E-212ENST00000614705 DNAJC5Q9H3Z4 198 aa28.17■■■□□ 2.1
POLR2E-212ENST00000614705 FGD5Q6ZNL6 1462 aa28.15■■■□□ 2.1
POLR2E-212ENST00000614705 ZNF608Q9ULD9 1512 aaPredicted RBP28.15■■■□□ 2.1
POLR2E-212ENST00000614705 EIF4G3O43432 1585 aaKnown RBP28.14■■■□□ 2.1
POLR2E-212ENST00000614705 SOGA1O94964 1423 aa28.08■■■□□ 2.09
POLR2E-212ENST00000614705 RAD54L2Q9Y4B4 1467 aa28.06■■■□□ 2.08
POLR2E-212ENST00000614705 WDR97A6NE52 1622 aa28.06■■■□□ 2.08
POLR2E-212ENST00000614705 BIVM-ERCC5R4GMW8 1640 aa28.05■■■□□ 2.08
POLR2E-212ENST00000614705 WRNQ14191 1432 aaPredicted RBP eCLIP28.03■■■□□ 2.08
POLR2E-212ENST00000614705 TOP2BQ02880 1626 aa28.02■■■□□ 2.08
POLR2E-212ENST00000614705 SYNJ1O43426 1573 aa27.98■■■□□ 2.07
POLR2E-212ENST00000614705 AQRO60306 1485 aaKnown RBP eCLIP27.96■■■□□ 2.073e-7■■■■■ 27.1
POLR2E-212ENST00000614705 ABCA10Q8WWZ4 1543 aa27.9■■■□□ 2.06
POLR2E-212ENST00000614705 TDRD9Q8NDG6 1382 aaKnown RBP27.89■■■□□ 2.06
POLR2E-212ENST00000614705 ABCA5Q8WWZ7 1642 aa27.83■■■□□ 2.05
POLR2E-212ENST00000614705 PBRM1Q86U86 1689 aa27.82■■■□□ 2.04
POLR2E-212ENST00000614705 GRIN2BQ13224 1484 aa27.81■■■□□ 2.04
POLR2E-212ENST00000614705 CHD1O14646 1710 aa27.81■■■□□ 2.04
POLR2E-212ENST00000614705 OSCARQ8IYS5 282 aa27.79■■■□□ 2.04
POLR2E-212ENST00000614705 GAPVD1Q14C86 1478 aa27.78■■■□□ 2.04
POLR2E-212ENST00000614705 MAGI1Q96QZ7 1491 aaPredicted RBP27.77■■■□□ 2.04
POLR2E-212ENST00000614705 SNAPC4Q5SXM2 1469 aa27.76■■■□□ 2.04
POLR2E-212ENST00000614705 SYNJ2O15056 1496 aa27.64■■■□□ 2.02
POLR2E-212ENST00000614705 FBLN2P98095 1184 aa27.61■■■□□ 2.01
POLR2E-212ENST00000614705 ERICH3Q5RHP9 1530 aa27.58■■■□□ 2.01
POLR2E-212ENST00000614705 ADAMTS12P58397 1594 aa27.58■■■□□ 2.01
POLR2E-212ENST00000614705 CHMP7Q8WUX9 453 aaPredicted RBP27.55■■■□□ 2
POLR2E-212ENST00000614705 CLASP1Q7Z460 1538 aa27.47■■□□□ 1.99
POLR2E-212ENST00000614705 FHAD1B1AJZ9 1412 aa27.47■■□□□ 1.99
POLR2E-212ENST00000614705 KIF27Q86VH2 1401 aa27.46■■□□□ 1.99
POLR2E-212ENST00000614705 RIMBP3CA6NJZ7 1639 aa27.45■■□□□ 1.99
POLR2E-212ENST00000614705 RIMBP3BA6NNM3 1639 aa27.45■■□□□ 1.99
POLR2E-212ENST00000614705 RIMBP3Q9UFD9 1639 aa27.45■■□□□ 1.99
POLR2E-212ENST00000614705 GRIN2AQ12879 1464 aa27.45■■□□□ 1.99
POLR2E-212ENST00000614705 ARHGEF11O15085 1522 aa27.42■■□□□ 1.98
POLR2E-212ENST00000614705 CUL7Q14999 1698 aa27.37■■□□□ 1.97
POLR2E-212ENST00000614705 NUP160Q12769 1436 aa27.33■■□□□ 1.96
POLR2E-212ENST00000614705 CEP170Q5SW79 1584 aa27.32■■□□□ 1.96
POLR2E-212ENST00000614705 IGF1RP08069 1367 aa27.27■■□□□ 1.96
POLR2E-212ENST00000614705 TRIM41Q8WV44 630 aa27.24■■□□□ 1.95
POLR2E-212ENST00000614705 ARAP1Q96P48 1450 aa27.19■■□□□ 1.94
POLR2E-212ENST00000614705 SHROOM2Q13796 1616 aa27.18■■□□□ 1.94
POLR2E-212ENST00000614705 RUSC2Q8N2Y8 1516 aa27.17■■□□□ 1.94
POLR2E-212ENST00000614705 CARMIL1Q5VZK9 1371 aa27.14■■□□□ 1.94
POLR2E-212ENST00000614705 CYB5RLQ6IPT4 315 aa27.06■■□□□ 1.92
POLR2E-212ENST00000614705 KIAA0586Q9BVV6 1533 aa27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms