RNA–Protein interactions for RNA: ENST00000290649.9

AMFR-201, Transcript of autocrine motility factor receptor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene AMFR, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMFR-201ENST00000290649 NISCHQ9Y2I1 1504 aa31.14■■■□□ 2.58
AMFR-201ENST00000290649 SHROOM4Q9ULL8 1493 aa29.42■■■□□ 2.3
AMFR-201ENST00000290649 SUPT5HO00267 1087 aaKnown RBP29.41■■■□□ 2.3
AMFR-201ENST00000290649 PCGF6Q9BYE7 350 aa28.8■■■□□ 2.2
AMFR-201ENST00000290649 PPARGC1BQ86YN6 1023 aaKnown RBP28.65■■■□□ 2.18
AMFR-201ENST00000290649 DCAF8L2P0C7V8 631 aa28.61■■■□□ 2.17
AMFR-201ENST00000290649 HRCP23327 699 aa28.47■■■□□ 2.15
AMFR-201ENST00000290649 EHMT2Q96KQ7 1210 aa28.04■■■□□ 2.08
AMFR-201ENST00000290649 CHIC1Q5VXU3 224 aa27.87■■■□□ 2.05
AMFR-201ENST00000290649 LOC105371045A0A1W2PR82 267 aa27.87■■■□□ 2.05
AMFR-201ENST00000290649 MYO15BQ96JP2 1530 aa27.61■■■□□ 2.01
AMFR-201ENST00000290649 FAM9AQ8IZU1 332 aaPredicted RBP27.52■■■□□ 2
AMFR-201ENST00000290649 TRIM26Q12899 539 aaPredicted RBP27.22■■□□□ 1.95
AMFR-201ENST00000290649 TTBK1Q5TCY1 1321 aaPredicted RBP27.2■■□□□ 1.94
AMFR-201ENST00000290649 PELP1Q8IZL8 1130 aaKnown RBP27.06■■□□□ 1.92
AMFR-201ENST00000290649 SCAF1Q9H7N4 1312 aaKnown RBP27.04■■□□□ 1.92
AMFR-201ENST00000290649 ZEB1P37275 1124 aaPredicted RBP26.79■■□□□ 1.88
AMFR-201ENST00000290649 TRIM41Q8WV44 630 aa26.79■■□□□ 1.88
AMFR-201ENST00000290649 CCER1Q8TC90 406 aaPredicted RBP26.75■■□□□ 1.87
AMFR-201ENST00000290649 YTHDC1Q96MU7 727 aaKnown RBP26.75■■□□□ 1.87
AMFR-201ENST00000290649 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.75■■□□□ 1.87
AMFR-201ENST00000290649 GTF3C3Q9Y5Q9 886 aa26.59■■□□□ 1.85
AMFR-201ENST00000290649 NEUROD1Q13562 356 aa26.53■■□□□ 1.84
AMFR-201ENST00000290649 DCAF1Q9Y4B6 1507 aa26.51■■□□□ 1.83
AMFR-201ENST00000290649 CENPBP07199 599 aaPredicted RBP26.44■■□□□ 1.82
AMFR-201ENST00000290649 ACIN1Q9UKV3 1341 aaKnown RBP26.4■■□□□ 1.82
AMFR-201ENST00000290649 DIEXFQ68CQ4 756 aaKnown RBP26.34■■□□□ 1.81
AMFR-201ENST00000290649 ZCCHC6Q5VYS8 1495 aaKnown RBP26.26■■□□□ 1.79
AMFR-201ENST00000290649 RANGAP1P46060 587 aaPredicted RBP26.03■■□□□ 1.76
AMFR-201ENST00000290649 CCDC180Q9P1Z9 1646 aa25.98■■□□□ 1.75
AMFR-201ENST00000290649 HNRNPUL2Q1KMD3 747 aaKnown RBP25.87■■□□□ 1.73
AMFR-201ENST00000290649 MYT1Q01538 1121 aa25.81■■□□□ 1.72
AMFR-201ENST00000290649 UBTFP17480 764 aaKnown RBP25.79■■□□□ 1.72
AMFR-201ENST00000290649 MIER1Q8N108 512 aa25.64■■□□□ 1.69
AMFR-201ENST00000290649 ZNF316A6NFI3 1004 aaPredicted RBP25.62■■□□□ 1.69
AMFR-201ENST00000290649 BCANQ96GW7 911 aa25.49■■□□□ 1.67
AMFR-201ENST00000290649 APLP2Q06481 763 aa25.42■■□□□ 1.66
AMFR-201ENST00000290649 RSF1Q96T23 1441 aaPredicted RBP25.36■■□□□ 1.65
AMFR-201ENST00000290649 ITGAEP38570 1179 aa25.27■■□□□ 1.64
AMFR-201ENST00000290649 SCRIBQ14160 1630 aa25.24■■□□□ 1.63
AMFR-201ENST00000290649 RB1CC1Q8TDY2 1594 aa25.19■■□□□ 1.62
AMFR-201ENST00000290649 SUPT16HQ9Y5B9 1047 aaKnown RBP24.98■■□□□ 1.59
AMFR-201ENST00000290649 CSRNP3Q8WYN3 585 aa24.93■■□□□ 1.58
AMFR-201ENST00000290649 CEP162Q5TB80 1403 aa24.92■■□□□ 1.58
AMFR-201ENST00000290649 CECR2Q9BXF3 1484 aa24.91■■□□□ 1.58
AMFR-201ENST00000290649 FKBP8Q14318 412 aa24.86■■□□□ 1.57
AMFR-201ENST00000290649 ABCC9O60706 1549 aa24.83■■□□□ 1.57
AMFR-201ENST00000290649 NEFLP07196 543 aa24.82■■□□□ 1.56
AMFR-201ENST00000290649 KCNH8Q96L42 1107 aa24.81■■□□□ 1.56
AMFR-201ENST00000290649 HIRIP3Q9BW71 556 aaPredicted RBP24.79■■□□□ 1.56
AMFR-201ENST00000290649 BCL11AQ9H165 835 aa24.78■■□□□ 1.56
AMFR-201ENST00000290649 TSHZ2Q9NRE2 1034 aa24.78■■□□□ 1.56
AMFR-201ENST00000290649 SOGA1O94964 1423 aa24.78■■□□□ 1.56
AMFR-201ENST00000290649 ERICH6Q7L0X2 663 aa24.78■■□□□ 1.56
AMFR-201ENST00000290649 ANP32EQ9BTT0 268 aa24.77■■□□□ 1.56
AMFR-201ENST00000290649 ATP1B4Q9UN42 357 aaPredicted RBP24.77■■□□□ 1.56
AMFR-201ENST00000290649 TRIM52Q96A61 297 aa24.72■■□□□ 1.55
AMFR-201ENST00000290649 ABCC8Q09428 1581 aa24.68■■□□□ 1.54
AMFR-201ENST00000290649 CCDC88BA6NC98 1476 aa24.67■■□□□ 1.54
AMFR-201ENST00000290649 DDX10Q13206 875 aaKnown RBP24.67■■□□□ 1.54
AMFR-201ENST00000290649 CNGB1Q14028 1251 aaPredicted RBP24.63■■□□□ 1.53
AMFR-201ENST00000290649 IRX6P78412 446 aaPredicted RBP24.62■■□□□ 1.53
AMFR-201ENST00000290649 MROH2BQ7Z745 1585 aa24.61■■□□□ 1.53
AMFR-201ENST00000290649 PABPN1Q86U42 306 aaKnown RBP eCLIP24.56■■□□□ 1.52
AMFR-201ENST00000290649 RUSC2Q8N2Y8 1516 aa24.56■■□□□ 1.52
AMFR-201ENST00000290649 TNIKQ9UKE5 1360 aa24.49■■□□□ 1.51
AMFR-201ENST00000290649 WIZO95785 1651 aa24.45■■□□□ 1.5
AMFR-201ENST00000290649 CLIP1P30622 1438 aa24.41■■□□□ 1.5
AMFR-201ENST00000290649 FAM50AQ14320 339 aaKnown RBP24.4■■□□□ 1.5
AMFR-201ENST00000290649 RBM19Q9Y4C8 960 aaKnown RBP24.37■■□□□ 1.49
AMFR-201ENST00000290649 KANK4Q5T7N3 995 aaPredicted RBP24.31■■□□□ 1.48
AMFR-201ENST00000290649 SIN3AQ96ST3 1273 aa24.31■■□□□ 1.48
AMFR-201ENST00000290649 WRNQ14191 1432 aaPredicted RBP eCLIP24.3■■□□□ 1.48
AMFR-201ENST00000290649 SENP3-EIF4A1A0A087X0R7 540 aa24.28■■□□□ 1.48
AMFR-201ENST00000290649 GOLGA3Q08378 1498 aa24.26■■□□□ 1.47
AMFR-201ENST00000290649 ANP32CO43423 234 aa24.25■■□□□ 1.47
AMFR-201ENST00000290649 CLSPNQ9HAW4 1339 aa24.24■■□□□ 1.47
AMFR-201ENST00000290649 P3H3Q8IVL6 736 aa24.23■■□□□ 1.47
AMFR-201ENST00000290649 HNRNPUQ00839 825 aaKnown RBP eCLIP24.2■■□□□ 1.46
AMFR-201ENST00000290649 NBR1Q14596 966 aa24.2■■□□□ 1.46
AMFR-201ENST00000290649 CDK11AQ9UQ88 783 aaPredicted RBP24.17■■□□□ 1.46
AMFR-201ENST00000290649 POLR3GLQ9BT43 218 aa24.14■■□□□ 1.45
AMFR-201ENST00000290649 DHX57Q6P158 1386 aaKnown RBP24.13■■□□□ 1.45
AMFR-201ENST00000290649 VPS8Q8N3P4 1428 aa24.02■■□□□ 1.44
AMFR-201ENST00000290649 FAM9BQ8IZU0 186 aa23.98■■□□□ 1.43
AMFR-201ENST00000290649 CEP164Q9UPV0 1460 aa23.95■■□□□ 1.42
AMFR-201ENST00000290649 RAPGEF2Q9Y4G8 1499 aa23.94■■□□□ 1.42
AMFR-201ENST00000290649 EEA1Q15075 1411 aa23.94■■□□□ 1.42
AMFR-201ENST00000290649 MSH5O43196 834 aa23.93■■□□□ 1.42
AMFR-201ENST00000290649 B4GALNT3Q6L9W6 998 aa23.92■■□□□ 1.42
AMFR-201ENST00000290649 RTN4Q9NQC3 1192 aaKnown RBP23.86■■□□□ 1.41
AMFR-201ENST00000290649 NPM2Q86SE8 214 aaKnown RBP23.84■■□□□ 1.41
AMFR-201ENST00000290649 RAB3GAP2Q9H2M9 1393 aa23.82■■□□□ 1.4
AMFR-201ENST00000290649 BAZ1AQ9NRL2 1556 aaPredicted RBP23.82■■□□□ 1.4
AMFR-201ENST00000290649 DEKP35659 375 aaKnown RBP23.81■■□□□ 1.4
AMFR-201ENST00000290649 CCNB3Q8WWL7 1395 aa23.8■■□□□ 1.4
AMFR-201ENST00000290649 RTL5Q5HYW3 569 aaPredicted RBP23.77■■□□□ 1.4
AMFR-201ENST00000290649 TONSLQ96HA7 1378 aa23.76■■□□□ 1.39
AMFR-201ENST00000290649 ARID3CA6NKF2 412 aa23.75■■□□□ 1.39
AMFR-201ENST00000290649 BAZ1BQ9UIG0 1483 aaKnown RBP23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms