RNA–Protein interactions for RNA: ENST00000594523.5

CALM3-206, Transcript of calmodulin 3, humanhuman

TSL 4 BASIC

Gene CALM3, Length 540 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3-206ENST00000594523 NISCHQ9Y2I1 1504 aa30.54■■■□□ 2.48
CALM3-206ENST00000594523 ABCC9O60706 1549 aa27.38■■□□□ 1.97
CALM3-206ENST00000594523 CCDC180Q9P1Z9 1646 aa27.31■■□□□ 1.96
CALM3-206ENST00000594523 RB1CC1Q8TDY2 1594 aa25.99■■□□□ 1.75
CALM3-206ENST00000594523 DCAF8L2P0C7V8 631 aa25.92■■□□□ 1.74
CALM3-206ENST00000594523 NACADO15069 1562 aa25.81■■□□□ 1.72
CALM3-206ENST00000594523 DNAJC5BQ9UF47 199 aa25.58■■□□□ 1.69
CALM3-206ENST00000594523 PABPN1Q86U42 306 aaKnown RBP eCLIP25.54■■□□□ 1.68
CALM3-206ENST00000594523 UNC13AQ9UPW8 1703 aa25.41■■□□□ 1.66
CALM3-206ENST00000594523 MYO15BQ96JP2 1530 aa25.41■■□□□ 1.66
CALM3-206ENST00000594523 ZCCHC6Q5VYS8 1495 aaKnown RBP25.34■■□□□ 1.65
CALM3-206ENST00000594523 BICRAQ9NZM4 1560 aa25.24■■□□□ 1.63
CALM3-206ENST00000594523 DCAF1Q9Y4B6 1507 aa25.15■■□□□ 1.62
CALM3-206ENST00000594523 SCRIBQ14160 1630 aa25.04■■□□□ 1.6
CALM3-206ENST00000594523 SHROOM4Q9ULL8 1493 aa24.81■■□□□ 1.56
CALM3-206ENST00000594523 CC2D2AQ9P2K1 1620 aa24.67■■□□□ 1.54
CALM3-206ENST00000594523 EIF4G1Q04637 1599 aaKnown RBP24.63■■□□□ 1.53
CALM3-206ENST00000594523 CECR2Q9BXF3 1484 aa24.61■■□□□ 1.53
CALM3-206ENST00000594523 NCAPD3P42695 1498 aa23.83■■□□□ 1.41
CALM3-206ENST00000594523 SMARCA4P51532 1647 aa23.82■■□□□ 1.4
CALM3-206ENST00000594523 ATAD2BQ9ULI0 1458 aa23.81■■□□□ 1.4
CALM3-206ENST00000594523 SMARCA2P51531 1590 aa23.73■■□□□ 1.39
CALM3-206ENST00000594523 BAZ1AQ9NRL2 1556 aaPredicted RBP23.7■■□□□ 1.38
CALM3-206ENST00000594523 HMGXB3Q12766 1538 aa23.66■■□□□ 1.38
CALM3-206ENST00000594523 ERCC6Q03468 1493 aa23.62■■□□□ 1.37
CALM3-206ENST00000594523 BAZ1BQ9UIG0 1483 aaKnown RBP23.62■■□□□ 1.37
CALM3-206ENST00000594523 MROH2BQ7Z745 1585 aa23.59■■□□□ 1.37
CALM3-206ENST00000594523 NESP48681 1621 aa23.54■■□□□ 1.36
CALM3-206ENST00000594523 PEG3Q9GZU2 1588 aa23.52■■□□□ 1.36
CALM3-206ENST00000594523 CUX2O14529 1486 aa23.44■■□□□ 1.34
CALM3-206ENST00000594523 DNAJC5Q9H3Z4 198 aa23.35■■□□□ 1.33
CALM3-206ENST00000594523 WIZO95785 1651 aa23.32■■□□□ 1.32
CALM3-206ENST00000594523 LAMC3Q9Y6N6 1575 aa23.29■■□□□ 1.32
CALM3-206ENST00000594523 THOC2Q8NI27 1593 aaKnown RBP23.21■■□□□ 1.31
CALM3-206ENST00000594523 KIF21AQ7Z4S6 1674 aa23.19■■□□□ 1.3
CALM3-206ENST00000594523 PDS5BQ9NTI5 1447 aa23.17■■□□□ 1.3
CALM3-206ENST00000594523 CADPSQ9ULU8 1353 aa23.14■■□□□ 1.3
CALM3-206ENST00000594523 RSF1Q96T23 1441 aaPredicted RBP23.12■■□□□ 1.29
CALM3-206ENST00000594523 MRC2Q9UBG0 1479 aa22.99■■□□□ 1.27
CALM3-206ENST00000594523 TOP2AP11388 1531 aaKnown RBP22.99■■□□□ 1.27
CALM3-206ENST00000594523 CEP164Q9UPV0 1460 aa22.93■■□□□ 1.26
CALM3-206ENST00000594523 FANCD2Q9BXW9 1451 aa22.92■■□□□ 1.26
CALM3-206ENST00000594523 WDR62O43379 1518 aa22.91■■□□□ 1.26
CALM3-206ENST00000594523 CFTRP13569 1480 aa22.89■■□□□ 1.25
CALM3-206ENST00000594523 CCDC88BA6NC98 1476 aa22.75■■□□□ 1.23
CALM3-206ENST00000594523 URB2Q14146 1524 aaKnown RBP22.73■■□□□ 1.23
CALM3-206ENST00000594523 PRDM2Q13029 1718 aa22.63■■□□□ 1.21
CALM3-206ENST00000594523 TRIM41Q8WV44 630 aa22.52■■□□□ 1.2
CALM3-206ENST00000594523 TOPBP1Q92547 1522 aa22.49■■□□□ 1.19
CALM3-206ENST00000594523 ZNF608Q9ULD9 1512 aaPredicted RBP22.46■■□□□ 1.19
CALM3-206ENST00000594523 OSCARQ8IYS5 282 aa22.44■■□□□ 1.18
CALM3-206ENST00000594523 IFT140Q96RY7 1462 aa22.44■■□□□ 1.18
CALM3-206ENST00000594523 DNMBPQ6XZF7 1577 aa22.39■■□□□ 1.18
CALM3-206ENST00000594523 ABCC8Q09428 1581 aa22.38■■□□□ 1.17
CALM3-206ENST00000594523 EIF4G3O43432 1585 aaKnown RBP22.31■■□□□ 1.16
CALM3-206ENST00000594523 SUPT5HO00267 1087 aaKnown RBP22.31■■□□□ 1.16
CALM3-206ENST00000594523 AQRO60306 1485 aaKnown RBP eCLIP22.27■■□□□ 1.161e-10■■□□□ 12.6
CALM3-206ENST00000594523 POLA1P09884 1462 aaPredicted RBP22.27■■□□□ 1.16
CALM3-206ENST00000594523 TARBP1Q13395 1621 aaKnown RBP22.25■■□□□ 1.15
CALM3-206ENST00000594523 RAD54L2Q9Y4B4 1467 aa22.23■■□□□ 1.15
CALM3-206ENST00000594523 SOGA1O94964 1423 aa22.18■■□□□ 1.14
CALM3-206ENST00000594523 FBLN2P98095 1184 aa22.18■■□□□ 1.14
CALM3-206ENST00000594523 TDRD9Q8NDG6 1382 aaKnown RBP22.17■■□□□ 1.14
CALM3-206ENST00000594523 FGD5Q6ZNL6 1462 aa22.16■■□□□ 1.14
CALM3-206ENST00000594523 CUX1P39880 1505 aa22.15■■□□□ 1.14
CALM3-206ENST00000594523 RIMBP3CA6NJZ7 1639 aa22.14■■□□□ 1.14
CALM3-206ENST00000594523 RIMBP3BA6NNM3 1639 aa22.14■■□□□ 1.14
CALM3-206ENST00000594523 RIMBP3Q9UFD9 1639 aa22.14■■□□□ 1.14
CALM3-206ENST00000594523 CHD1O14646 1710 aa22.13■■□□□ 1.13
CALM3-206ENST00000594523 ARHGEF11O15085 1522 aa22.09■■□□□ 1.13
CALM3-206ENST00000594523 SNAPC4Q5SXM2 1469 aa22.04■■□□□ 1.12
CALM3-206ENST00000594523 CYB5RLQ6IPT4 315 aa21.98■■□□□ 1.11
CALM3-206ENST00000594523 CHMP7Q8WUX9 453 aaPredicted RBP21.96■■□□□ 1.11
CALM3-206ENST00000594523 WDR97A6NE52 1622 aa21.95■■□□□ 1.1
CALM3-206ENST00000594523 GRIN2BQ13224 1484 aa21.95■■□□□ 1.1
CALM3-206ENST00000594523 MAGI1Q96QZ7 1491 aaPredicted RBP21.92■■□□□ 1.1
CALM3-206ENST00000594523 GAPVD1Q14C86 1478 aa21.9■■□□□ 1.1
CALM3-206ENST00000594523 ARAP1Q96P48 1450 aa21.89■■□□□ 1.09
CALM3-206ENST00000594523 PBRM1Q86U86 1689 aa21.88■■□□□ 1.09
CALM3-206ENST00000594523 SYNJ2O15056 1496 aa21.87■■□□□ 1.09
CALM3-206ENST00000594523 ABCA10Q8WWZ4 1543 aa21.86■■□□□ 1.09
CALM3-206ENST00000594523 SYNJ1O43426 1573 aa21.85■■□□□ 1.09
CALM3-206ENST00000594523 CLASP1Q7Z460 1538 aa21.84■■□□□ 1.09
CALM3-206ENST00000594523 ABCA5Q8WWZ7 1642 aa21.83■■□□□ 1.08
CALM3-206ENST00000594523 WRNQ14191 1432 aaPredicted RBP eCLIP21.82■■□□□ 1.08
CALM3-206ENST00000594523 TOP2BQ02880 1626 aa21.78■■□□□ 1.08
CALM3-206ENST00000594523 BIVM-ERCC5R4GMW8 1640 aa21.77■■□□□ 1.08
CALM3-206ENST00000594523 TRHP20396 242 aaPredicted RBP21.74■■□□□ 1.07
CALM3-206ENST00000594523 GRIN2AQ12879 1464 aa21.68■■□□□ 1.06
CALM3-206ENST00000594523 ADAMTS12P58397 1594 aa21.68■■□□□ 1.06
CALM3-206ENST00000594523 FHAD1B1AJZ9 1412 aa21.62■■□□□ 1.05
CALM3-206ENST00000594523 CEP170Q5SW79 1584 aa21.61■■□□□ 1.05
CALM3-206ENST00000594523 ERCC6L2Q5T890 1561 aa21.58■■□□□ 1.05
CALM3-206ENST00000594523 ERICH3Q5RHP9 1530 aa21.58■■□□□ 1.04
CALM3-206ENST00000594523 NUP160Q12769 1436 aa21.57■■□□□ 1.04
CALM3-206ENST00000594523 SHROOM2Q13796 1616 aa21.44■■□□□ 1.02
CALM3-206ENST00000594523 PRG4Q92954 1404 aaPredicted RBP21.42■■□□□ 1.02
CALM3-206ENST00000594523 KIF27Q86VH2 1401 aa21.39■■□□□ 1.02
CALM3-206ENST00000594523 JPH4Q96JJ6 628 aa21.39■■□□□ 1.01
CALM3-206ENST00000594523 RUSC2Q8N2Y8 1516 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms