RNA–Protein interactions for RNA: ENST00000566757.1

AMFR-208, Transcript of autocrine motility factor receptor, humanhuman

Gene AMFR, Length 1,844 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMFR-208ENST00000566757 NISCHQ9Y2I1 1504 aa35.15■■■■□ 3.22
AMFR-208ENST00000566757 CCDC180Q9P1Z9 1646 aa31.12■■■□□ 2.57
AMFR-208ENST00000566757 ABCC9O60706 1549 aa30.6■■■□□ 2.49
AMFR-208ENST00000566757 DCAF8L2P0C7V8 631 aa29.41■■■□□ 2.3
AMFR-208ENST00000566757 RB1CC1Q8TDY2 1594 aa29.31■■■□□ 2.28
AMFR-208ENST00000566757 NACADO15069 1562 aa29.29■■■□□ 2.28
AMFR-208ENST00000566757 ZCCHC6Q5VYS8 1495 aaKnown RBP29.27■■■□□ 2.28
AMFR-208ENST00000566757 MYO15BQ96JP2 1530 aa29.12■■■□□ 2.25
AMFR-208ENST00000566757 DCAF1Q9Y4B6 1507 aa29.02■■■□□ 2.24
AMFR-208ENST00000566757 UNC13AQ9UPW8 1703 aa28.74■■■□□ 2.19
AMFR-208ENST00000566757 PABPN1Q86U42 306 aaKnown RBP eCLIP28.66■■■□□ 2.18
AMFR-208ENST00000566757 BICRAQ9NZM4 1560 aa28.56■■■□□ 2.16
AMFR-208ENST00000566757 SCRIBQ14160 1630 aa28.51■■■□□ 2.15
AMFR-208ENST00000566757 SHROOM4Q9ULL8 1493 aa28.38■■■□□ 2.13
AMFR-208ENST00000566757 DNAJC5BQ9UF47 199 aa28.24■■■□□ 2.11
AMFR-208ENST00000566757 EIF4G1Q04637 1599 aaKnown RBP27.75■■■□□ 2.03
AMFR-208ENST00000566757 CC2D2AQ9P2K1 1620 aa27.64■■■□□ 2.01
AMFR-208ENST00000566757 SUPT5HO00267 1087 aaKnown RBP27.58■■■□□ 2.01
AMFR-208ENST00000566757 CECR2Q9BXF3 1484 aa27.48■■□□□ 1.99
AMFR-208ENST00000566757 SMARCA4P51532 1647 aa27.25■■□□□ 1.95
AMFR-208ENST00000566757 BAZ1AQ9NRL2 1556 aaPredicted RBP27.18■■□□□ 1.94
AMFR-208ENST00000566757 MROH2BQ7Z745 1585 aa27.15■■□□□ 1.94
AMFR-208ENST00000566757 ATAD2BQ9ULI0 1458 aa27.14■■□□□ 1.94
AMFR-208ENST00000566757 NCAPD3P42695 1498 aa27.1■■□□□ 1.93
AMFR-208ENST00000566757 SMARCA2P51531 1590 aa27■■□□□ 1.91
AMFR-208ENST00000566757 PEG3Q9GZU2 1588 aa26.97■■□□□ 1.91
AMFR-208ENST00000566757 HMGXB3Q12766 1538 aa26.9■■□□□ 1.9
AMFR-208ENST00000566757 RSF1Q96T23 1441 aaPredicted RBP26.9■■□□□ 1.9
AMFR-208ENST00000566757 BAZ1BQ9UIG0 1483 aaKnown RBP26.85■■□□□ 1.89
AMFR-208ENST00000566757 WIZO95785 1651 aa26.83■■□□□ 1.89
AMFR-208ENST00000566757 CHIC1Q5VXU3 224 aa26.7■■□□□ 1.87
AMFR-208ENST00000566757 NESP48681 1621 aa26.53■■□□□ 1.84
AMFR-208ENST00000566757 TOP2AP11388 1531 aaKnown RBP26.48■■□□□ 1.83
AMFR-208ENST00000566757 CADPSQ9ULU8 1353 aa26.31■■□□□ 1.8
AMFR-208ENST00000566757 LAMC3Q9Y6N6 1575 aa26.3■■□□□ 1.8
AMFR-208ENST00000566757 ERCC6Q03468 1493 aa26.27■■□□□ 1.8
AMFR-208ENST00000566757 CCDC88BA6NC98 1476 aa26.25■■□□□ 1.79
AMFR-208ENST00000566757 CFTRP13569 1480 aa26.16■■□□□ 1.78
AMFR-208ENST00000566757 PDS5BQ9NTI5 1447 aa26.14■■□□□ 1.78
AMFR-208ENST00000566757 KIF21AQ7Z4S6 1674 aa26.12■■□□□ 1.77
AMFR-208ENST00000566757 THOC2Q8NI27 1593 aaKnown RBP26.03■■□□□ 1.76
AMFR-208ENST00000566757 FANCD2Q9BXW9 1451 aa26■■□□□ 1.75
AMFR-208ENST00000566757 CUX2O14529 1486 aa25.97■■□□□ 1.75
AMFR-208ENST00000566757 TRIM41Q8WV44 630 aa25.94■■□□□ 1.74
AMFR-208ENST00000566757 CEP164Q9UPV0 1460 aa25.92■■□□□ 1.74
AMFR-208ENST00000566757 MRC2Q9UBG0 1479 aa25.89■■□□□ 1.73
AMFR-208ENST00000566757 PRDM2Q13029 1718 aa25.84■■□□□ 1.73
AMFR-208ENST00000566757 WDR62O43379 1518 aa25.82■■□□□ 1.72
AMFR-208ENST00000566757 URB2Q14146 1524 aaKnown RBP25.79■■□□□ 1.72
AMFR-208ENST00000566757 LOC105371045A0A1W2PR82 267 aa25.66■■□□□ 1.7
AMFR-208ENST00000566757 TOPBP1Q92547 1522 aa25.6■■□□□ 1.69
AMFR-208ENST00000566757 DNMBPQ6XZF7 1577 aa25.52■■□□□ 1.68
AMFR-208ENST00000566757 ABCC8Q09428 1581 aa25.49■■□□□ 1.67
AMFR-208ENST00000566757 CUX1P39880 1505 aa25.44■■□□□ 1.66
AMFR-208ENST00000566757 FAM9AQ8IZU1 332 aaPredicted RBP25.42■■□□□ 1.66
AMFR-208ENST00000566757 POLA1P09884 1462 aaPredicted RBP25.39■■□□□ 1.66
AMFR-208ENST00000566757 ZNF608Q9ULD9 1512 aaPredicted RBP25.39■■□□□ 1.65
AMFR-208ENST00000566757 IFT140Q96RY7 1462 aa25.38■■□□□ 1.65
AMFR-208ENST00000566757 RAD54L2Q9Y4B4 1467 aa25.34■■□□□ 1.65
AMFR-208ENST00000566757 FGD5Q6ZNL6 1462 aa25.33■■□□□ 1.65
AMFR-208ENST00000566757 TARBP1Q13395 1621 aaKnown RBP25.32■■□□□ 1.64
AMFR-208ENST00000566757 WRNQ14191 1432 aaPredicted RBP eCLIP25.31■■□□□ 1.64
AMFR-208ENST00000566757 DNAJC5Q9H3Z4 198 aa25.28■■□□□ 1.64
AMFR-208ENST00000566757 SOGA1O94964 1423 aa25.28■■□□□ 1.64
AMFR-208ENST00000566757 EEA1Q15075 1411 aa25.28■■□□□ 1.64
AMFR-208ENST00000566757 AQRO60306 1485 aaKnown RBP eCLIP25.24■■□□□ 1.63
AMFR-208ENST00000566757 SYNJ1O43426 1573 aa25.22■■□□□ 1.63
AMFR-208ENST00000566757 TDRD9Q8NDG6 1382 aaKnown RBP25.19■■□□□ 1.62
AMFR-208ENST00000566757 EIF4G3O43432 1585 aaKnown RBP25.18■■□□□ 1.62
AMFR-208ENST00000566757 TOP2BQ02880 1626 aa25.17■■□□□ 1.62
AMFR-208ENST00000566757 BIVM-ERCC5R4GMW8 1640 aa25.15■■□□□ 1.62
AMFR-208ENST00000566757 WDR97A6NE52 1622 aa25.08■■□□□ 1.61
AMFR-208ENST00000566757 ABCA10Q8WWZ4 1543 aa25.06■■□□□ 1.6
AMFR-208ENST00000566757 PCGF6Q9BYE7 350 aa25.05■■□□□ 1.6
AMFR-208ENST00000566757 CSRNP3Q8WYN3 585 aa25.04■■□□□ 1.6
AMFR-208ENST00000566757 EHMT2Q96KQ7 1210 aa25■■□□□ 1.59
AMFR-208ENST00000566757 TRIM26Q12899 539 aaPredicted RBP24.98■■□□□ 1.59
AMFR-208ENST00000566757 RUSC2Q8N2Y8 1516 aa24.98■■□□□ 1.59
AMFR-208ENST00000566757 OSCARQ8IYS5 282 aa24.97■■□□□ 1.59
AMFR-208ENST00000566757 GAPVD1Q14C86 1478 aa24.97■■□□□ 1.59
AMFR-208ENST00000566757 ABCA5Q8WWZ7 1642 aa24.95■■□□□ 1.58
AMFR-208ENST00000566757 GRIN2BQ13224 1484 aa24.94■■□□□ 1.58
AMFR-208ENST00000566757 SNAPC4Q5SXM2 1469 aa24.94■■□□□ 1.58
AMFR-208ENST00000566757 TNIKQ9UKE5 1360 aa24.94■■□□□ 1.58
AMFR-208ENST00000566757 GOLGA3Q08378 1498 aa24.91■■□□□ 1.58
AMFR-208ENST00000566757 KIF21BO75037 1637 aa24.89■■□□□ 1.57
AMFR-208ENST00000566757 FBLN2P98095 1184 aa24.89■■□□□ 1.57
AMFR-208ENST00000566757 PBRM1Q86U86 1689 aa24.87■■□□□ 1.57
AMFR-208ENST00000566757 CHD1O14646 1710 aa24.87■■□□□ 1.57
AMFR-208ENST00000566757 MAGI1Q96QZ7 1491 aaPredicted RBP24.84■■□□□ 1.57
AMFR-208ENST00000566757 CEP162Q5TB80 1403 aa24.82■■□□□ 1.56
AMFR-208ENST00000566757 HRCP23327 699 aa24.79■■□□□ 1.56
AMFR-208ENST00000566757 CHMP7Q8WUX9 453 aaPredicted RBP24.79■■□□□ 1.56
AMFR-208ENST00000566757 SYNJ2O15056 1496 aa24.78■■□□□ 1.56
AMFR-208ENST00000566757 UBTFP17480 764 aaKnown RBP24.75■■□□□ 1.55
AMFR-208ENST00000566757 ERICH3Q5RHP9 1530 aa24.72■■□□□ 1.55
AMFR-208ENST00000566757 ADAMTS12P58397 1594 aa24.7■■□□□ 1.55
AMFR-208ENST00000566757 IGF1RP08069 1367 aa24.68■■□□□ 1.54
AMFR-208ENST00000566757 KIF27Q86VH2 1401 aa24.68■■□□□ 1.54
AMFR-208ENST00000566757 FHAD1B1AJZ9 1412 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms