RNA–Protein interactions for RNA: ENST00000424499.1

PPT2-250, Transcript of palmitoyl-protein thioesterase 2, humanhuman

TSL 3

Gene PPT2, Length 722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPT2-250ENST00000424499 NISCHQ9Y2I1 1504 aa50.49■■■■■ 5.67
PPT2-250ENST00000424499 ABCC9O60706 1549 aa45.39■■■■■ 4.86
PPT2-250ENST00000424499 CCDC180Q9P1Z9 1646 aa45.39■■■■■ 4.86
PPT2-250ENST00000424499 RB1CC1Q8TDY2 1594 aa43.13■■■■■ 4.5
PPT2-250ENST00000424499 NACADO15069 1562 aa42.8■■■■■ 4.44
PPT2-250ENST00000424499 DNAJC5BQ9UF47 199 aa42.61■■■■■ 4.41
PPT2-250ENST00000424499 UNC13AQ9UPW8 1703 aa42.47■■■■■ 4.39
PPT2-250ENST00000424499 DCAF8L2P0C7V8 631 aa42.44■■■■■ 4.38
PPT2-250ENST00000424499 PABPN1Q86U42 306 aaKnown RBP eCLIP42.18■■■■■ 4.34
PPT2-250ENST00000424499 MYO15BQ96JP2 1530 aa42.16■■■■■ 4.34
PPT2-250ENST00000424499 BICRAQ9NZM4 1560 aa42.05■■■■■ 4.32
PPT2-250ENST00000424499 ZCCHC6Q5VYS8 1495 aaKnown RBP41.87■■■■■ 4.29
PPT2-250ENST00000424499 DCAF1Q9Y4B6 1507 aa41.65■■■■■ 4.26
PPT2-250ENST00000424499 SCRIBQ14160 1630 aa41.4■■■■■ 4.22
PPT2-250ENST00000424499 SHROOM4Q9ULL8 1493 aa41.22■■■■■ 4.19
PPT2-250ENST00000424499 CC2D2AQ9P2K1 1620 aa41.05■■■■■ 4.16
PPT2-250ENST00000424499 EIF4G1Q04637 1599 aaKnown RBP40.93■■■■■ 4.14
PPT2-250ENST00000424499 CECR2Q9BXF3 1484 aa40.83■■■■■ 4.13
PPT2-250ENST00000424499 NCAPD3P42695 1498 aa39.49■■■■□ 3.91
PPT2-250ENST00000424499 SMARCA4P51532 1647 aa39.47■■■■□ 3.91
PPT2-250ENST00000424499 ATAD2BQ9ULI0 1458 aa39.43■■■■□ 3.9
PPT2-250ENST00000424499 SMARCA2P51531 1590 aa39.27■■■■□ 3.88
PPT2-250ENST00000424499 HMGXB3Q12766 1538 aa39.27■■■■□ 3.88
PPT2-250ENST00000424499 BAZ1AQ9NRL2 1556 aaPredicted RBP39.16■■■■□ 3.86
PPT2-250ENST00000424499 ERCC6Q03468 1493 aa39.07■■■■□ 3.85
PPT2-250ENST00000424499 NESP48681 1621 aa39.05■■■■□ 3.84
PPT2-250ENST00000424499 PEG3Q9GZU2 1588 aa39.04■■■■□ 3.84
PPT2-250ENST00000424499 CUX2O14529 1486 aa39.03■■■■□ 3.84
PPT2-250ENST00000424499 BAZ1BQ9UIG0 1483 aaKnown RBP39.01■■■■□ 3.84
PPT2-250ENST00000424499 DNAJC5Q9H3Z4 198 aa38.98■■■■□ 3.83
PPT2-250ENST00000424499 MROH2BQ7Z745 1585 aa38.98■■■■□ 3.83
PPT2-250ENST00000424499 THOC2Q8NI27 1593 aaKnown RBP38.71■■■■□ 3.79
PPT2-250ENST00000424499 LAMC3Q9Y6N6 1575 aa38.66■■■■□ 3.78
PPT2-250ENST00000424499 KIF21AQ7Z4S6 1674 aa38.64■■■■□ 3.78
PPT2-250ENST00000424499 WIZO95785 1651 aa38.57■■■■□ 3.76
PPT2-250ENST00000424499 PDS5BQ9NTI5 1447 aa38.3■■■■□ 3.72
PPT2-250ENST00000424499 CADPSQ9ULU8 1353 aa38.25■■■■□ 3.71
PPT2-250ENST00000424499 MRC2Q9UBG0 1479 aa38.09■■■■□ 3.69
PPT2-250ENST00000424499 WDR62O43379 1518 aa38.07■■■■□ 3.68
PPT2-250ENST00000424499 RSF1Q96T23 1441 aaPredicted RBP38.06■■■■□ 3.68
PPT2-250ENST00000424499 TOP2AP11388 1531 aaKnown RBP37.97■■■■□ 3.67
PPT2-250ENST00000424499 CEP164Q9UPV0 1460 aa37.93■■■■□ 3.66
PPT2-250ENST00000424499 FANCD2Q9BXW9 1451 aa37.9■■■■□ 3.66
PPT2-250ENST00000424499 CFTRP13569 1480 aa37.88■■■■□ 3.65
PPT2-250ENST00000424499 PRDM2Q13029 1718 aa37.72■■■■□ 3.63
PPT2-250ENST00000424499 URB2Q14146 1524 aaKnown RBP37.67■■■■□ 3.62
PPT2-250ENST00000424499 CCDC88BA6NC98 1476 aa37.52■■■■□ 3.6
PPT2-250ENST00000424499 TRIM41Q8WV44 630 aa37.3■■■■□ 3.56
PPT2-250ENST00000424499 TOPBP1Q92547 1522 aa37.22■■■■□ 3.55
PPT2-250ENST00000424499 ZNF608Q9ULD9 1512 aaPredicted RBP37.22■■■■□ 3.55
PPT2-250ENST00000424499 IFT140Q96RY7 1462 aa37.13■■■■□ 3.54
PPT2-250ENST00000424499 OSCARQ8IYS5 282 aa37.1■■■■□ 3.53
PPT2-250ENST00000424499 DNMBPQ6XZF7 1577 aa37.08■■■■□ 3.53
PPT2-250ENST00000424499 EIF4G3O43432 1585 aaKnown RBP37.06■■■■□ 3.52
PPT2-250ENST00000424499 TARBP1Q13395 1621 aaKnown RBP36.98■■■■□ 3.51
PPT2-250ENST00000424499 ABCC8Q09428 1581 aa36.95■■■■□ 3.51
PPT2-250ENST00000424499 RIMBP3CA6NJZ7 1639 aa36.93■■■■□ 3.5
PPT2-250ENST00000424499 RIMBP3BA6NNM3 1639 aa36.93■■■■□ 3.5
PPT2-250ENST00000424499 RIMBP3Q9UFD9 1639 aa36.93■■■■□ 3.5
PPT2-250ENST00000424499 CHD1O14646 1710 aa36.85■■■■□ 3.49
PPT2-250ENST00000424499 POLA1P09884 1462 aaPredicted RBP36.84■■■■□ 3.49
PPT2-250ENST00000424499 AQRO60306 1485 aaKnown RBP eCLIP36.81■■■■□ 3.482e-7■■■■■ 33.5
PPT2-250ENST00000424499 ARHGEF11O15085 1522 aa36.75■■■■□ 3.47
PPT2-250ENST00000424499 RAD54L2Q9Y4B4 1467 aa36.72■■■■□ 3.47
PPT2-250ENST00000424499 CUX1P39880 1505 aa36.62■■■■□ 3.45
PPT2-250ENST00000424499 FGD5Q6ZNL6 1462 aa36.61■■■■□ 3.45
PPT2-250ENST00000424499 SOGA1O94964 1423 aa36.56■■■■□ 3.44
PPT2-250ENST00000424499 TDRD9Q8NDG6 1382 aaKnown RBP36.53■■■■□ 3.44
PPT2-250ENST00000424499 WDR97A6NE52 1622 aa36.51■■■■□ 3.43
PPT2-250ENST00000424499 SNAPC4Q5SXM2 1469 aa36.45■■■■□ 3.43
PPT2-250ENST00000424499 FBLN2P98095 1184 aa36.42■■■■□ 3.42
PPT2-250ENST00000424499 ARAP1Q96P48 1450 aa36.41■■■■□ 3.42
PPT2-250ENST00000424499 PBRM1Q86U86 1689 aa36.35■■■■□ 3.41
PPT2-250ENST00000424499 CLASP1Q7Z460 1538 aa36.34■■■■□ 3.41
PPT2-250ENST00000424499 CYB5RLQ6IPT4 315 aa36.31■■■■□ 3.4
PPT2-250ENST00000424499 MAGI1Q96QZ7 1491 aaPredicted RBP36.27■■■■□ 3.4
PPT2-250ENST00000424499 GRIN2BQ13224 1484 aa36.26■■■■□ 3.4
PPT2-250ENST00000424499 SUPT5HO00267 1087 aaKnown RBP36.26■■■■□ 3.4
PPT2-250ENST00000424499 ABCA5Q8WWZ7 1642 aa36.22■■■■□ 3.39
PPT2-250ENST00000424499 SYNJ1O43426 1573 aa36.2■■■■□ 3.39
PPT2-250ENST00000424499 SYNJ2O15056 1496 aa36.17■■■■□ 3.38
PPT2-250ENST00000424499 GAPVD1Q14C86 1478 aa36.16■■■■□ 3.38
PPT2-250ENST00000424499 ABCA10Q8WWZ4 1543 aa36.15■■■■□ 3.38
PPT2-250ENST00000424499 CHMP7Q8WUX9 453 aaPredicted RBP36.11■■■■□ 3.37
PPT2-250ENST00000424499 BIVM-ERCC5R4GMW8 1640 aa36.06■■■■□ 3.36
PPT2-250ENST00000424499 TOP2BQ02880 1626 aa36■■■■□ 3.35
PPT2-250ENST00000424499 ADAMTS12P58397 1594 aa35.93■■■■□ 3.34
PPT2-250ENST00000424499 WRNQ14191 1432 aaPredicted RBP eCLIP35.89■■■■□ 3.34
PPT2-250ENST00000424499 TRHP20396 242 aaPredicted RBP35.86■■■■□ 3.33
PPT2-250ENST00000424499 GRIN2AQ12879 1464 aa35.86■■■■□ 3.33
PPT2-250ENST00000424499 ERCC6L2Q5T890 1561 aa35.85■■■■□ 3.33
PPT2-250ENST00000424499 CEP170Q5SW79 1584 aa35.85■■■■□ 3.33
PPT2-250ENST00000424499 NUP160Q12769 1436 aa35.74■■■■□ 3.31
PPT2-250ENST00000424499 SHROOM2Q13796 1616 aa35.68■■■■□ 3.3
PPT2-250ENST00000424499 ERICH3Q5RHP9 1530 aa35.67■■■■□ 3.3
PPT2-250ENST00000424499 FHAD1B1AJZ9 1412 aa35.66■■■■□ 3.3
PPT2-250ENST00000424499 RUSC2Q8N2Y8 1516 aa35.45■■■■□ 3.27
PPT2-250ENST00000424499 PRG4Q92954 1404 aaPredicted RBP35.35■■■■□ 3.25
PPT2-250ENST00000424499 KIF13AQ9H1H9 1805 aa35.32■■■■□ 3.24
PPT2-250ENST00000424499 JPH4Q96JJ6 628 aa35.23■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms