Protein–RNA interactions for Protein: O14817

TSPAN4, Tetraspanin-4, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4O14817 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TSPAN4O14817 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
TSPAN4O14817 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TSPAN4O14817 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TSPAN4O14817 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.8□□□□□ -0.2
TSPAN4O14817 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TSPAN4O14817 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TSPAN4O14817 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
TSPAN4O14817 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TSPAN4O14817 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.8□□□□□ -0.2
TSPAN4O14817 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TSPAN4O14817 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TSPAN4O14817 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TSPAN4O14817 SDHAP2-201ENST00000455183 2001 ntBASIC13.8□□□□□ -0.2
TSPAN4O14817 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TSPAN4O14817 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TSPAN4O14817 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TSPAN4O14817 UROS-202ENST00000368778 1556 ntTSL 2 BASIC13.79□□□□□ -0.2
TSPAN4O14817 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
TSPAN4O14817 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
TSPAN4O14817 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TSPAN4O14817 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TSPAN4O14817 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
TSPAN4O14817 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TSPAN4O14817 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TSPAN4O14817 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TSPAN4O14817 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.79□□□□□ -0.2
TSPAN4O14817 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
TSPAN4O14817 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC13.79□□□□□ -0.2
TSPAN4O14817 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC13.79□□□□□ -0.2
TSPAN4O14817 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TSPAN4O14817 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
TSPAN4O14817 GUK1-204ENST00000366721 689 ntTSL 3 BASIC13.79□□□□□ -0.2
TSPAN4O14817 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TSPAN4O14817 MIR1224-201ENST00000408193 85 ntBASIC13.79□□□□□ -0.2
TSPAN4O14817 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC13.79□□□□□ -0.2
TSPAN4O14817 AL671277.2-201ENST00000458060 996 ntBASIC13.79□□□□□ -0.2
TSPAN4O14817 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC13.79□□□□□ -0.2
TSPAN4O14817 LY6E-213ENST00000522528 606 ntTSL 3 BASIC13.79□□□□□ -0.2
TSPAN4O14817 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TSPAN4O14817 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC13.79□□□□□ -0.2
TSPAN4O14817 RMI2-205ENST00000576027 818 ntTSL 2 BASIC13.79□□□□□ -0.2
TSPAN4O14817 NTF6B-201ENST00000591913 560 ntBASIC13.79□□□□□ -0.2
TSPAN4O14817 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TSPAN4O14817 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.79□□□□□ -0.2
TSPAN4O14817 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
TSPAN4O14817 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TSPAN4O14817 HAL-202ENST00000538703 2637 ntTSL 2 BASIC13.79□□□□□ -0.2
TSPAN4O14817 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TSPAN4O14817 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TSPAN4O14817 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
TSPAN4O14817 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TSPAN4O14817 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TSPAN4O14817 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TSPAN4O14817 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TSPAN4O14817 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TSPAN4O14817 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TSPAN4O14817 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TSPAN4O14817 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC13.79□□□□□ -0.2
TSPAN4O14817 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TSPAN4O14817 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
TSPAN4O14817 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TSPAN4O14817 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
TSPAN4O14817 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TSPAN4O14817 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TSPAN4O14817 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TSPAN4O14817 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TSPAN4O14817 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
TSPAN4O14817 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TSPAN4O14817 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.78□□□□□ -0.2
TSPAN4O14817 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
TSPAN4O14817 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC13.78□□□□□ -0.2
TSPAN4O14817 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TSPAN4O14817 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TSPAN4O14817 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TSPAN4O14817 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
TSPAN4O14817 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
TSPAN4O14817 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.78□□□□□ -0.2
TSPAN4O14817 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.78□□□□□ -0.2
TSPAN4O14817 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TSPAN4O14817 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TSPAN4O14817 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TSPAN4O14817 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.78□□□□□ -0.2
TSPAN4O14817 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TSPAN4O14817 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
TSPAN4O14817 HBZP1-201ENST00000354915 429 ntBASIC13.78□□□□□ -0.2
TSPAN4O14817 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC13.78□□□□□ -0.2
TSPAN4O14817 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC13.78□□□□□ -0.2
TSPAN4O14817 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TSPAN4O14817 DAP-202ENST00000432074 1048 ntTSL 2 BASIC13.78□□□□□ -0.2
TSPAN4O14817 HLA-F-220ENST00000434407 884 ntBASIC13.78□□□□□ -0.2
TSPAN4O14817 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC13.78□□□□□ -0.2
TSPAN4O14817 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC13.78□□□□□ -0.2
TSPAN4O14817 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC13.78□□□□□ -0.2
TSPAN4O14817 AC010331.1-201ENST00000611423 582 ntBASIC13.78□□□□□ -0.2
TSPAN4O14817 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC13.78□□□□□ -0.2
TSPAN4O14817 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC13.78□□□□□ -0.2
TSPAN4O14817 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC13.78□□□□□ -0.2
TSPAN4O14817 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
TSPAN4O14817 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms