RNA–Protein interactions for RNA: ENST00000541397.2

LHX6-207, Transcript of LIM homeobox 6, humanhuman

TSL 2 BASIC

Gene LHX6, Length 2,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6-207ENST00000541397 NISCHQ9Y2I1 1504 aa28.99■■■□□ 2.23
LHX6-207ENST00000541397 SHROOM4Q9ULL8 1493 aa25.65■■□□□ 1.7
LHX6-207ENST00000541397 SUPT5HO00267 1087 aaKnown RBP25.37■■□□□ 1.65
LHX6-207ENST00000541397 MYO15BQ96JP2 1530 aa24.68■■□□□ 1.54
LHX6-207ENST00000541397 HRCP23327 699 aa24.68■■□□□ 1.54
LHX6-207ENST00000541397 CHIC1Q5VXU3 224 aa24.64■■□□□ 1.54
LHX6-207ENST00000541397 DCAF8L2P0C7V8 631 aa24.61■■□□□ 1.53
LHX6-207ENST00000541397 PCGF6Q9BYE7 350 aa24.58■■□□□ 1.53
LHX6-207ENST00000541397 ZCCHC6Q5VYS8 1495 aaKnown RBP24.56■■□□□ 1.52
LHX6-207ENST00000541397 PPARGC1BQ86YN6 1023 aaKnown RBP24.4■■□□□ 1.5
LHX6-207ENST00000541397 LOC105371045A0A1W2PR82 267 aa24.17■■□□□ 1.46
LHX6-207ENST00000541397 CCDC180Q9P1Z9 1646 aa24.16■■□□□ 1.46
LHX6-207ENST00000541397 DCAF1Q9Y4B6 1507 aa23.87■■□□□ 1.41
LHX6-207ENST00000541397 TRIM26Q12899 539 aaPredicted RBP23.75■■□□□ 1.39
LHX6-207ENST00000541397 EHMT2Q96KQ7 1210 aa23.55■■□□□ 1.36
LHX6-207ENST00000541397 FAM9AQ8IZU1 332 aaPredicted RBP23.53■■□□□ 1.36
LHX6-207ENST00000541397 TRIM41Q8WV44 630 aa23.42■■□□□ 1.34
LHX6-207ENST00000541397 ZEB1P37275 1124 aaPredicted RBP23.31■■□□□ 1.32
LHX6-207ENST00000541397 ABCC9O60706 1549 aa23.25■■□□□ 1.31
LHX6-207ENST00000541397 RSF1Q96T23 1441 aaPredicted RBP23.24■■□□□ 1.31
LHX6-207ENST00000541397 SCRIBQ14160 1630 aa23.18■■□□□ 1.3
LHX6-207ENST00000541397 SCAF1Q9H7N4 1312 aaKnown RBP23.16■■□□□ 1.3
LHX6-207ENST00000541397 RB1CC1Q8TDY2 1594 aa23.1■■□□□ 1.29
LHX6-207ENST00000541397 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.96■■□□□ 1.27
LHX6-207ENST00000541397 PELP1Q8IZL8 1130 aaKnown RBP22.94■■□□□ 1.26
LHX6-207ENST00000541397 TTBK1Q5TCY1 1321 aaPredicted RBP22.86■■□□□ 1.25
LHX6-207ENST00000541397 CCER1Q8TC90 406 aaPredicted RBP22.86■■□□□ 1.25
LHX6-207ENST00000541397 CECR2Q9BXF3 1484 aa22.81■■□□□ 1.24
LHX6-207ENST00000541397 NEUROD1Q13562 356 aa22.72■■□□□ 1.23
LHX6-207ENST00000541397 MROH2BQ7Z745 1585 aa22.7■■□□□ 1.22
LHX6-207ENST00000541397 ACIN1Q9UKV3 1341 aaKnown RBP22.69■■□□□ 1.22
LHX6-207ENST00000541397 DIEXFQ68CQ4 756 aaKnown RBP22.61■■□□□ 1.21
LHX6-207ENST00000541397 WIZO95785 1651 aa22.61■■□□□ 1.21
LHX6-207ENST00000541397 GTF3C3Q9Y5Q9 886 aa22.57■■□□□ 1.2
LHX6-207ENST00000541397 CENPBP07199 599 aaPredicted RBP22.46■■□□□ 1.19
LHX6-207ENST00000541397 ABCC8Q09428 1581 aa22.38■■□□□ 1.17
LHX6-207ENST00000541397 YTHDC1Q96MU7 727 aaKnown RBP22.37■■□□□ 1.17
LHX6-207ENST00000541397 CCDC88BA6NC98 1476 aa22.35■■□□□ 1.17
LHX6-207ENST00000541397 NACADO15069 1562 aa22.34■■□□□ 1.17
LHX6-207ENST00000541397 UBTFP17480 764 aaKnown RBP22.33■■□□□ 1.16
LHX6-207ENST00000541397 CEP162Q5TB80 1403 aa22.32■■□□□ 1.16
LHX6-207ENST00000541397 BAZ1AQ9NRL2 1556 aaPredicted RBP22.31■■□□□ 1.16
LHX6-207ENST00000541397 SOGA1O94964 1423 aa22.29■■□□□ 1.16
LHX6-207ENST00000541397 EIF4G1Q04637 1599 aaKnown RBP22.26■■□□□ 1.15
LHX6-207ENST00000541397 ZNF316A6NFI3 1004 aaPredicted RBP22.24■■□□□ 1.15
LHX6-207ENST00000541397 WRNQ14191 1432 aaPredicted RBP eCLIP22.22■■□□□ 1.15
LHX6-207ENST00000541397 HNRNPUL2Q1KMD3 747 aaKnown RBP22.2■■□□□ 1.14
LHX6-207ENST00000541397 RUSC2Q8N2Y8 1516 aa22.18■■□□□ 1.14
LHX6-207ENST00000541397 CSRNP3Q8WYN3 585 aa22.18■■□□□ 1.14
LHX6-207ENST00000541397 TNIKQ9UKE5 1360 aa22.15■■□□□ 1.14
LHX6-207ENST00000541397 MIER1Q8N108 512 aa22.11■■□□□ 1.13
LHX6-207ENST00000541397 TOP2AP11388 1531 aaKnown RBP22.08■■□□□ 1.13
LHX6-207ENST00000541397 RANGAP1P46060 587 aaPredicted RBP22.07■■□□□ 1.12
LHX6-207ENST00000541397 SMARCA2P51531 1590 aa22.04■■□□□ 1.12
LHX6-207ENST00000541397 SMARCA4P51532 1647 aa21.97■■□□□ 1.11
LHX6-207ENST00000541397 GOLGA3Q08378 1498 aa21.94■■□□□ 1.1
LHX6-207ENST00000541397 EEA1Q15075 1411 aa21.91■■□□□ 1.1
LHX6-207ENST00000541397 APLP2Q06481 763 aa21.86■■□□□ 1.09
LHX6-207ENST00000541397 PABPN1Q86U42 306 aaKnown RBP eCLIP21.86■■□□□ 1.09
LHX6-207ENST00000541397 MYT1Q01538 1121 aa21.82■■□□□ 1.08
LHX6-207ENST00000541397 CLIP1P30622 1438 aa21.82■■□□□ 1.08
LHX6-207ENST00000541397 CEP164Q9UPV0 1460 aa21.74■■□□□ 1.07
LHX6-207ENST00000541397 VPS8Q8N3P4 1428 aa21.69■■□□□ 1.06
LHX6-207ENST00000541397 SYNJ1O43426 1573 aa21.69■■□□□ 1.06
LHX6-207ENST00000541397 UNC13AQ9UPW8 1703 aa21.68■■□□□ 1.06
LHX6-207ENST00000541397 RAPGEF2Q9Y4G8 1499 aa21.66■■□□□ 1.06
LHX6-207ENST00000541397 KIF21BO75037 1637 aa21.6■■□□□ 1.05
LHX6-207ENST00000541397 KANK4Q5T7N3 995 aaPredicted RBP21.53■■□□□ 1.04
LHX6-207ENST00000541397 SUPT16HQ9Y5B9 1047 aaKnown RBP21.53■■□□□ 1.04
LHX6-207ENST00000541397 DHX57Q6P158 1386 aaKnown RBP21.53■■□□□ 1.04
LHX6-207ENST00000541397 ITGAEP38570 1179 aa21.52■■□□□ 1.04
LHX6-207ENST00000541397 BAZ1BQ9UIG0 1483 aaKnown RBP21.47■■□□□ 1.03
LHX6-207ENST00000541397 KCNH8Q96L42 1107 aa21.4■■□□□ 1.02
LHX6-207ENST00000541397 BICRAQ9NZM4 1560 aa21.4■■□□□ 1.02
LHX6-207ENST00000541397 CLSPNQ9HAW4 1339 aa21.38■■□□□ 1.01
LHX6-207ENST00000541397 ATAD2BQ9ULI0 1458 aa21.36■■□□□ 1.01
LHX6-207ENST00000541397 ARAP1Q96P48 1450 aa21.34■■□□□ 1.01
LHX6-207ENST00000541397 BCANQ96GW7 911 aa21.33■■□□□ 1.01
LHX6-207ENST00000541397 PEG3Q9GZU2 1588 aa21.33■■□□□ 1
LHX6-207ENST00000541397 TSHZ2Q9NRE2 1034 aa21.31■■□□□ 1
LHX6-207ENST00000541397 TOP2BQ02880 1626 aa21.25■□□□□ 0.99
LHX6-207ENST00000541397 CCNB3Q8WWL7 1395 aa21.22■□□□□ 0.99
LHX6-207ENST00000541397 PRXQ9BXM0 1461 aa21.22■□□□□ 0.99
LHX6-207ENST00000541397 DDX10Q13206 875 aaKnown RBP21.19■□□□□ 0.98
LHX6-207ENST00000541397 RRBP1Q9P2E9 1410 aaKnown RBP21.19■□□□□ 0.98
LHX6-207ENST00000541397 HIRIP3Q9BW71 556 aaPredicted RBP21.16■□□□□ 0.98
LHX6-207ENST00000541397 ERICH3Q5RHP9 1530 aa21.15■□□□□ 0.98
LHX6-207ENST00000541397 RAB3GAP2Q9H2M9 1393 aa21.15■□□□□ 0.98
LHX6-207ENST00000541397 FKBP8Q14318 412 aa21.15■□□□□ 0.98
LHX6-207ENST00000541397 SIN3AQ96ST3 1273 aa21.15■□□□□ 0.98
LHX6-207ENST00000541397 FAM50AQ14320 339 aaKnown RBP21.1■□□□□ 0.97
LHX6-207ENST00000541397 ARHGAP35Q9NRY4 1499 aa21.09■□□□□ 0.97
LHX6-207ENST00000541397 ATP1B4Q9UN42 357 aaPredicted RBP21.09■□□□□ 0.97
LHX6-207ENST00000541397 BIVM-ERCC5R4GMW8 1640 aa21.09■□□□□ 0.97
LHX6-207ENST00000541397 KIF27Q86VH2 1401 aa21.09■□□□□ 0.97
LHX6-207ENST00000541397 ANP32EQ9BTT0 268 aa21.08■□□□□ 0.97
LHX6-207ENST00000541397 CUX1P39880 1505 aa21.05■□□□□ 0.96
LHX6-207ENST00000541397 CUX2O14529 1486 aa21.04■□□□□ 0.96
LHX6-207ENST00000541397 TRIM52Q96A61 297 aa21.04■□□□□ 0.96
LHX6-207ENST00000541397 P3H3Q8IVL6 736 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 174.2 ms