RNA–Protein interactions for RNA: ENST00000545718.2

SCAP-215, Transcript of SREBF chaperone, humanhuman

TSL 5 BASIC

Gene SCAP, Length 2,950 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-215ENST00000545718 NISCHQ9Y2I1 1504 aa32.34■■■□□ 2.77
SCAP-215ENST00000545718 SHROOM4Q9ULL8 1493 aa27.91■■■□□ 2.06
SCAP-215ENST00000545718 DCAF8L2P0C7V8 631 aa27.41■■□□□ 1.98
SCAP-215ENST00000545718 CCDC180Q9P1Z9 1646 aa27.37■■□□□ 1.97
SCAP-215ENST00000545718 SUPT5HO00267 1087 aaKnown RBP27.36■■□□□ 1.97
SCAP-215ENST00000545718 ZCCHC6Q5VYS8 1495 aaKnown RBP27.29■■□□□ 1.96
SCAP-215ENST00000545718 DCAF1Q9Y4B6 1507 aa26.36■■□□□ 1.81
SCAP-215ENST00000545718 CHIC1Q5VXU3 224 aa26.34■■□□□ 1.81
SCAP-215ENST00000545718 MYO15BQ96JP2 1530 aa26.14■■□□□ 1.77
SCAP-215ENST00000545718 SCRIBQ14160 1630 aa25.93■■□□□ 1.74
SCAP-215ENST00000545718 ABCC9O60706 1549 aa25.9■■□□□ 1.74
SCAP-215ENST00000545718 LOC105371045A0A1W2PR82 267 aa25.7■■□□□ 1.7
SCAP-215ENST00000545718 RSF1Q96T23 1441 aaPredicted RBP25.62■■□□□ 1.69
SCAP-215ENST00000545718 PCGF6Q9BYE7 350 aa25.6■■□□□ 1.69
SCAP-215ENST00000545718 NACADO15069 1562 aa25.43■■□□□ 1.66
SCAP-215ENST00000545718 TRIM41Q8WV44 630 aa25.4■■□□□ 1.66
SCAP-215ENST00000545718 FAM9AQ8IZU1 332 aaPredicted RBP25.35■■□□□ 1.65
SCAP-215ENST00000545718 CECR2Q9BXF3 1484 aa25.35■■□□□ 1.65
SCAP-215ENST00000545718 HRCP23327 699 aa25.35■■□□□ 1.65
SCAP-215ENST00000545718 RB1CC1Q8TDY2 1594 aa25.34■■□□□ 1.65
SCAP-215ENST00000545718 EHMT2Q96KQ7 1210 aa25.29■■□□□ 1.64
SCAP-215ENST00000545718 MROH2BQ7Z745 1585 aa25.21■■□□□ 1.63
SCAP-215ENST00000545718 WIZO95785 1651 aa25.05■■□□□ 1.6
SCAP-215ENST00000545718 PPARGC1BQ86YN6 1023 aaKnown RBP25.02■■□□□ 1.6
SCAP-215ENST00000545718 TRIM26Q12899 539 aaPredicted RBP24.98■■□□□ 1.59
SCAP-215ENST00000545718 BAZ1AQ9NRL2 1556 aaPredicted RBP24.85■■□□□ 1.57
SCAP-215ENST00000545718 PABPN1Q86U42 306 aaKnown RBP eCLIP24.82■■□□□ 1.56
SCAP-215ENST00000545718 SMARCA4P51532 1647 aa24.63■■□□□ 1.53
SCAP-215ENST00000545718 UNC13AQ9UPW8 1703 aa24.62■■□□□ 1.53
SCAP-215ENST00000545718 TOP2AP11388 1531 aaKnown RBP24.58■■□□□ 1.53
SCAP-215ENST00000545718 CCDC88BA6NC98 1476 aa24.58■■□□□ 1.53
SCAP-215ENST00000545718 ABCC8Q09428 1581 aa24.55■■□□□ 1.52
SCAP-215ENST00000545718 EIF4G1Q04637 1599 aaKnown RBP24.47■■□□□ 1.51
SCAP-215ENST00000545718 SMARCA2P51531 1590 aa24.46■■□□□ 1.51
SCAP-215ENST00000545718 TTBK1Q5TCY1 1321 aaPredicted RBP24.42■■□□□ 1.5
SCAP-215ENST00000545718 BICRAQ9NZM4 1560 aa24.37■■□□□ 1.49
SCAP-215ENST00000545718 ZEB1P37275 1124 aaPredicted RBP24.34■■□□□ 1.49
SCAP-215ENST00000545718 SOGA1O94964 1423 aa24.33■■□□□ 1.48
SCAP-215ENST00000545718 UBTFP17480 764 aaKnown RBP24.29■■□□□ 1.48
SCAP-215ENST00000545718 CSRNP3Q8WYN3 585 aa24.22■■□□□ 1.47
SCAP-215ENST00000545718 RUSC2Q8N2Y8 1516 aa24.2■■□□□ 1.46
SCAP-215ENST00000545718 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.16■■□□□ 1.46
SCAP-215ENST00000545718 CEP162Q5TB80 1403 aa24.14■■□□□ 1.46
SCAP-215ENST00000545718 WRNQ14191 1432 aaPredicted RBP eCLIP24.13■■□□□ 1.45
SCAP-215ENST00000545718 CCER1Q8TC90 406 aaPredicted RBP24.09■■□□□ 1.45
SCAP-215ENST00000545718 ATAD2BQ9ULI0 1458 aa24.09■■□□□ 1.45
SCAP-215ENST00000545718 BAZ1BQ9UIG0 1483 aaKnown RBP24.08■■□□□ 1.45
SCAP-215ENST00000545718 TNIKQ9UKE5 1360 aa24.04■■□□□ 1.44
SCAP-215ENST00000545718 EEA1Q15075 1411 aa24.03■■□□□ 1.44
SCAP-215ENST00000545718 PEG3Q9GZU2 1588 aa24.03■■□□□ 1.44
SCAP-215ENST00000545718 RANGAP1P46060 587 aaPredicted RBP24.01■■□□□ 1.43
SCAP-215ENST00000545718 GOLGA3Q08378 1498 aa23.94■■□□□ 1.42
SCAP-215ENST00000545718 SYNJ1O43426 1573 aa23.94■■□□□ 1.42
SCAP-215ENST00000545718 CEP164Q9UPV0 1460 aa23.81■■□□□ 1.4
SCAP-215ENST00000545718 CLIP1P30622 1438 aa23.74■■□□□ 1.39
SCAP-215ENST00000545718 APLP2Q06481 763 aa23.73■■□□□ 1.39
SCAP-215ENST00000545718 HNRNPUL2Q1KMD3 747 aaKnown RBP23.71■■□□□ 1.39
SCAP-215ENST00000545718 RAPGEF2Q9Y4G8 1499 aa23.7■■□□□ 1.38
SCAP-215ENST00000545718 KIF21BO75037 1637 aa23.64■■□□□ 1.38
SCAP-215ENST00000545718 TOP2BQ02880 1626 aa23.58■■□□□ 1.37
SCAP-215ENST00000545718 NCAPD3P42695 1498 aa23.58■■□□□ 1.36
SCAP-215ENST00000545718 VPS8Q8N3P4 1428 aa23.55■■□□□ 1.36
SCAP-215ENST00000545718 HMGXB3Q12766 1538 aa23.5■■□□□ 1.35
SCAP-215ENST00000545718 DIEXFQ68CQ4 756 aaKnown RBP23.48■■□□□ 1.35
SCAP-215ENST00000545718 CUX1P39880 1505 aa23.44■■□□□ 1.34
SCAP-215ENST00000545718 BIVM-ERCC5R4GMW8 1640 aa23.43■■□□□ 1.34
SCAP-215ENST00000545718 KIF27Q86VH2 1401 aa23.4■■□□□ 1.34
SCAP-215ENST00000545718 CFTRP13569 1480 aa23.38■■□□□ 1.33
SCAP-215ENST00000545718 PRXQ9BXM0 1461 aa23.36■■□□□ 1.33
SCAP-215ENST00000545718 SCAF1Q9H7N4 1312 aaKnown RBP23.33■■□□□ 1.33
SCAP-215ENST00000545718 KANK4Q5T7N3 995 aaPredicted RBP23.31■■□□□ 1.32
SCAP-215ENST00000545718 ERICH3Q5RHP9 1530 aa23.29■■□□□ 1.32
SCAP-215ENST00000545718 ZNF316A6NFI3 1004 aaPredicted RBP23.28■■□□□ 1.32
SCAP-215ENST00000545718 ARAP1Q96P48 1450 aa23.26■■□□□ 1.31
SCAP-215ENST00000545718 CUX2O14529 1486 aa23.24■■□□□ 1.31
SCAP-215ENST00000545718 CADPSQ9ULU8 1353 aa23.23■■□□□ 1.31
SCAP-215ENST00000545718 ITGAEP38570 1179 aa23.21■■□□□ 1.31
SCAP-215ENST00000545718 NEUROD1Q13562 356 aa23.18■■□□□ 1.3
SCAP-215ENST00000545718 DNAJC5BQ9UF47 199 aa23.17■■□□□ 1.3
SCAP-215ENST00000545718 ACIN1Q9UKV3 1341 aaKnown RBP23.14■■□□□ 1.3
SCAP-215ENST00000545718 IGF1RP08069 1367 aa23.14■■□□□ 1.29
SCAP-215ENST00000545718 ATP1B4Q9UN42 357 aaPredicted RBP23.12■■□□□ 1.29
SCAP-215ENST00000545718 P3H3Q8IVL6 736 aa23.11■■□□□ 1.29
SCAP-215ENST00000545718 YTHDC1Q96MU7 727 aaKnown RBP23.11■■□□□ 1.29
SCAP-215ENST00000545718 FGD5Q6ZNL6 1462 aa23.11■■□□□ 1.29
SCAP-215ENST00000545718 ARHGAP35Q9NRY4 1499 aa23.11■■□□□ 1.29
SCAP-215ENST00000545718 CENPBP07199 599 aaPredicted RBP23.1■■□□□ 1.29
SCAP-215ENST00000545718 CC2D2AQ9P2K1 1620 aa23.1■■□□□ 1.29
SCAP-215ENST00000545718 CARMIL1Q5VZK9 1371 aa23.09■■□□□ 1.29
SCAP-215ENST00000545718 FANCD2Q9BXW9 1451 aa23.02■■□□□ 1.28
SCAP-215ENST00000545718 PRDM2Q13029 1718 aa23■■□□□ 1.27
SCAP-215ENST00000545718 MIER1Q8N108 512 aa22.99■■□□□ 1.27
SCAP-215ENST00000545718 DHX57Q6P158 1386 aaKnown RBP22.97■■□□□ 1.27
SCAP-215ENST00000545718 CCNB3Q8WWL7 1395 aa22.97■■□□□ 1.27
SCAP-215ENST00000545718 GTF3C3Q9Y5Q9 886 aa22.97■■□□□ 1.27
SCAP-215ENST00000545718 NESP48681 1621 aa22.95■■□□□ 1.26
SCAP-215ENST00000545718 RAD54L2Q9Y4B4 1467 aa22.95■■□□□ 1.26
SCAP-215ENST00000545718 RRBP1Q9P2E9 1410 aaKnown RBP22.92■■□□□ 1.26
SCAP-215ENST00000545718 FAM50AQ14320 339 aaKnown RBP22.9■■□□□ 1.26
SCAP-215ENST00000545718 CLSPNQ9HAW4 1339 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms