RNA–Protein interactions for RNA: ENST00000373467.3

HPCA-201, Transcript of hippocalcin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPCA, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPCA-201ENST00000373467 NISCHQ9Y2I1 1504 aa42.92■■■■■ 4.46
HPCA-201ENST00000373467 CCDC180Q9P1Z9 1646 aa37.74■■■■□ 3.63
HPCA-201ENST00000373467 ABCC9O60706 1549 aa36.32■■■■□ 3.41
HPCA-201ENST00000373467 ZCCHC6Q5VYS8 1495 aaKnown RBP35.87■■■■□ 3.33
HPCA-201ENST00000373467 DCAF8L2P0C7V8 631 aa35.77■■■■□ 3.32
HPCA-201ENST00000373467 DCAF1Q9Y4B6 1507 aa35.49■■■■□ 3.27
HPCA-201ENST00000373467 NACADO15069 1562 aa35.35■■■■□ 3.25
HPCA-201ENST00000373467 MYO15BQ96JP2 1530 aa35.35■■■■□ 3.25
HPCA-201ENST00000373467 RB1CC1Q8TDY2 1594 aa35.2■■■■□ 3.23
HPCA-201ENST00000373467 SCRIBQ14160 1630 aa34.57■■■■□ 3.12
HPCA-201ENST00000373467 SHROOM4Q9ULL8 1493 aa34.49■■■■□ 3.11
HPCA-201ENST00000373467 UNC13AQ9UPW8 1703 aa34.43■■■■□ 3.1
HPCA-201ENST00000373467 PABPN1Q86U42 306 aaKnown RBP eCLIP34.16■■■■□ 3.06
HPCA-201ENST00000373467 BICRAQ9NZM4 1560 aa34.13■■■■□ 3.05
HPCA-201ENST00000373467 CECR2Q9BXF3 1484 aa33.4■■■□□ 2.94
HPCA-201ENST00000373467 BAZ1AQ9NRL2 1556 aaPredicted RBP33.19■■■□□ 2.9
HPCA-201ENST00000373467 EIF4G1Q04637 1599 aaKnown RBP33.15■■■□□ 2.9
HPCA-201ENST00000373467 SMARCA4P51532 1647 aa33.12■■■□□ 2.89
HPCA-201ENST00000373467 MROH2BQ7Z745 1585 aa33.11■■■□□ 2.89
HPCA-201ENST00000373467 RSF1Q96T23 1441 aaPredicted RBP33.02■■■□□ 2.88
HPCA-201ENST00000373467 SUPT5HO00267 1087 aaKnown RBP32.91■■■□□ 2.86
HPCA-201ENST00000373467 CC2D2AQ9P2K1 1620 aa32.85■■■□□ 2.85
HPCA-201ENST00000373467 WIZO95785 1651 aa32.8■■■□□ 2.84
HPCA-201ENST00000373467 ATAD2BQ9ULI0 1458 aa32.78■■■□□ 2.84
HPCA-201ENST00000373467 PEG3Q9GZU2 1588 aa32.75■■■□□ 2.83
HPCA-201ENST00000373467 DNAJC5BQ9UF47 199 aa32.74■■■□□ 2.83
HPCA-201ENST00000373467 SMARCA2P51531 1590 aa32.74■■■□□ 2.83
HPCA-201ENST00000373467 NCAPD3P42695 1498 aa32.65■■■□□ 2.82
HPCA-201ENST00000373467 BAZ1BQ9UIG0 1483 aaKnown RBP32.54■■■□□ 2.8
HPCA-201ENST00000373467 HMGXB3Q12766 1538 aa32.49■■■□□ 2.79
HPCA-201ENST00000373467 TOP2AP11388 1531 aaKnown RBP32.43■■■□□ 2.78
HPCA-201ENST00000373467 CCDC88BA6NC98 1476 aa32.14■■■□□ 2.74
HPCA-201ENST00000373467 CADPSQ9ULU8 1353 aa31.77■■■□□ 2.68
HPCA-201ENST00000373467 CFTRP13569 1480 aa31.7■■■□□ 2.67
HPCA-201ENST00000373467 NESP48681 1621 aa31.66■■■□□ 2.66
HPCA-201ENST00000373467 LAMC3Q9Y6N6 1575 aa31.62■■■□□ 2.65
HPCA-201ENST00000373467 PRDM2Q13029 1718 aa31.45■■■□□ 2.63
HPCA-201ENST00000373467 PDS5BQ9NTI5 1447 aa31.44■■■□□ 2.62
HPCA-201ENST00000373467 FANCD2Q9BXW9 1451 aa31.37■■■□□ 2.61
HPCA-201ENST00000373467 KIF21AQ7Z4S6 1674 aa31.25■■■□□ 2.59
HPCA-201ENST00000373467 CEP164Q9UPV0 1460 aa31.23■■■□□ 2.59
HPCA-201ENST00000373467 ERCC6Q03468 1493 aa31.23■■■□□ 2.59
HPCA-201ENST00000373467 ABCC8Q09428 1581 aa31.18■■■□□ 2.58
HPCA-201ENST00000373467 CHIC1Q5VXU3 224 aa31.14■■■□□ 2.57
HPCA-201ENST00000373467 WRNQ14191 1432 aaPredicted RBP eCLIP31.11■■■□□ 2.57
HPCA-201ENST00000373467 MRC2Q9UBG0 1479 aa31.02■■■□□ 2.56
HPCA-201ENST00000373467 TRIM41Q8WV44 630 aa31.02■■■□□ 2.56
HPCA-201ENST00000373467 URB2Q14146 1524 aaKnown RBP31■■■□□ 2.55
HPCA-201ENST00000373467 CUX1P39880 1505 aa31■■■□□ 2.55
HPCA-201ENST00000373467 SYNJ1O43426 1573 aa30.96■■■□□ 2.55
HPCA-201ENST00000373467 TOPBP1Q92547 1522 aa30.95■■■□□ 2.55
HPCA-201ENST00000373467 DNMBPQ6XZF7 1577 aa30.94■■■□□ 2.54
HPCA-201ENST00000373467 TOP2BQ02880 1626 aa30.92■■■□□ 2.54
HPCA-201ENST00000373467 THOC2Q8NI27 1593 aaKnown RBP30.92■■■□□ 2.54
HPCA-201ENST00000373467 BIVM-ERCC5R4GMW8 1640 aa30.89■■■□□ 2.54
HPCA-201ENST00000373467 WDR62O43379 1518 aa30.87■■■□□ 2.53
HPCA-201ENST00000373467 FGD5Q6ZNL6 1462 aa30.78■■■□□ 2.52
HPCA-201ENST00000373467 POLA1P09884 1462 aaPredicted RBP30.73■■■□□ 2.51
HPCA-201ENST00000373467 SOGA1O94964 1423 aa30.69■■■□□ 2.5
HPCA-201ENST00000373467 RAD54L2Q9Y4B4 1467 aa30.65■■■□□ 2.5
HPCA-201ENST00000373467 CUX2O14529 1486 aa30.64■■■□□ 2.5
HPCA-201ENST00000373467 IFT140Q96RY7 1462 aa30.56■■■□□ 2.48
HPCA-201ENST00000373467 TARBP1Q13395 1621 aaKnown RBP30.53■■■□□ 2.48
HPCA-201ENST00000373467 ABCA10Q8WWZ4 1543 aa30.51■■■□□ 2.47
HPCA-201ENST00000373467 TDRD9Q8NDG6 1382 aaKnown RBP30.44■■■□□ 2.46
HPCA-201ENST00000373467 WDR97A6NE52 1622 aa30.42■■■□□ 2.46
HPCA-201ENST00000373467 RUSC2Q8N2Y8 1516 aa30.42■■■□□ 2.46
HPCA-201ENST00000373467 KIF27Q86VH2 1401 aa30.41■■■□□ 2.46
HPCA-201ENST00000373467 FAM9AQ8IZU1 332 aaPredicted RBP30.4■■■□□ 2.46
HPCA-201ENST00000373467 ZNF608Q9ULD9 1512 aaPredicted RBP30.38■■■□□ 2.45
HPCA-201ENST00000373467 AQRO60306 1485 aaKnown RBP eCLIP30.36■■■□□ 2.45
HPCA-201ENST00000373467 GAPVD1Q14C86 1478 aa30.31■■■□□ 2.44
HPCA-201ENST00000373467 EEA1Q15075 1411 aa30.3■■■□□ 2.44
HPCA-201ENST00000373467 CSRNP3Q8WYN3 585 aa30.28■■■□□ 2.44
HPCA-201ENST00000373467 ABCA5Q8WWZ7 1642 aa30.28■■■□□ 2.44
HPCA-201ENST00000373467 IGF1RP08069 1367 aa30.23■■■□□ 2.43
HPCA-201ENST00000373467 EIF4G3O43432 1585 aaKnown RBP30.23■■■□□ 2.43
HPCA-201ENST00000373467 GRIN2BQ13224 1484 aa30.18■■■□□ 2.42
HPCA-201ENST00000373467 ERICH3Q5RHP9 1530 aa30.14■■■□□ 2.41
HPCA-201ENST00000373467 PBRM1Q86U86 1689 aa30.14■■■□□ 2.41
HPCA-201ENST00000373467 CARMIL1Q5VZK9 1371 aa30.07■■■□□ 2.4
HPCA-201ENST00000373467 SNAPC4Q5SXM2 1469 aa30.02■■■□□ 2.4
HPCA-201ENST00000373467 MAGI1Q96QZ7 1491 aaPredicted RBP29.99■■■□□ 2.39
HPCA-201ENST00000373467 PRXQ9BXM0 1461 aa29.99■■■□□ 2.39
HPCA-201ENST00000373467 CUL7Q14999 1698 aa29.99■■■□□ 2.39
HPCA-201ENST00000373467 FHAD1B1AJZ9 1412 aa29.98■■■□□ 2.39
HPCA-201ENST00000373467 EHMT2Q96KQ7 1210 aa29.98■■■□□ 2.39
HPCA-201ENST00000373467 LOC105371045A0A1W2PR82 267 aa29.93■■■□□ 2.38
HPCA-201ENST00000373467 RAPGEF2Q9Y4G8 1499 aa29.93■■■□□ 2.38
HPCA-201ENST00000373467 CHMP7Q8WUX9 453 aaPredicted RBP29.93■■■□□ 2.38
HPCA-201ENST00000373467 ADAMTS12P58397 1594 aa29.92■■■□□ 2.38
HPCA-201ENST00000373467 FBLN2P98095 1184 aa29.92■■■□□ 2.38
HPCA-201ENST00000373467 KIF21BO75037 1637 aa29.9■■■□□ 2.38
HPCA-201ENST00000373467 SYNJ2O15056 1496 aa29.88■■■□□ 2.37
HPCA-201ENST00000373467 GOLGA3Q08378 1498 aa29.83■■■□□ 2.37
HPCA-201ENST00000373467 UBTFP17480 764 aaKnown RBP29.82■■■□□ 2.36
HPCA-201ENST00000373467 GRIN2AQ12879 1464 aa29.78■■■□□ 2.36
HPCA-201ENST00000373467 CHD1O14646 1710 aa29.73■■■□□ 2.35
HPCA-201ENST00000373467 TNIKQ9UKE5 1360 aa29.64■■■□□ 2.34
HPCA-201ENST00000373467 NUP160Q12769 1436 aa29.61■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms