RNA–Protein interactions for RNA: ENST00000354026.10

PML-203, Transcript of promyelocytic leukemia, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PML, Length 2,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PML-203ENST00000354026 NISCHQ9Y2I1 1504 aa28.28■■■□□ 2.12
PML-203ENST00000354026 SHROOM4Q9ULL8 1493 aa25.07■■□□□ 1.6
PML-203ENST00000354026 SUPT5HO00267 1087 aaKnown RBP24.68■■□□□ 1.54
PML-203ENST00000354026 DCAF8L2P0C7V8 631 aa24.4■■□□□ 1.5
PML-203ENST00000354026 ZCCHC6Q5VYS8 1495 aaKnown RBP23.89■■□□□ 1.41
PML-203ENST00000354026 HRCP23327 699 aa23.78■■□□□ 1.4
PML-203ENST00000354026 CHIC1Q5VXU3 224 aa23.7■■□□□ 1.39
PML-203ENST00000354026 MYO15BQ96JP2 1530 aa23.66■■□□□ 1.38
PML-203ENST00000354026 CCDC180Q9P1Z9 1646 aa23.58■■□□□ 1.37
PML-203ENST00000354026 PPARGC1BQ86YN6 1023 aaKnown RBP23.56■■□□□ 1.36
PML-203ENST00000354026 PCGF6Q9BYE7 350 aa23.47■■□□□ 1.35
PML-203ENST00000354026 LOC105371045A0A1W2PR82 267 aa23.34■■□□□ 1.33
PML-203ENST00000354026 PELP1Q8IZL8 1130 aaKnown RBP23.27■■□□□ 1.32
PML-203ENST00000354026 EHMT2Q96KQ7 1210 aa23.06■■□□□ 1.28
PML-203ENST00000354026 FAM9AQ8IZU1 332 aaPredicted RBP22.93■■□□□ 1.26
PML-203ENST00000354026 DCAF1Q9Y4B6 1507 aa22.81■■□□□ 1.24
PML-203ENST00000354026 SCAF1Q9H7N4 1312 aaKnown RBP22.79■■□□□ 1.24
PML-203ENST00000354026 SCRIBQ14160 1630 aa22.76■■□□□ 1.23
PML-203ENST00000354026 TRIM41Q8WV44 630 aa22.72■■□□□ 1.23
PML-203ENST00000354026 TRIM26Q12899 539 aaPredicted RBP22.62■■□□□ 1.21
PML-203ENST00000354026 RSF1Q96T23 1441 aaPredicted RBP22.61■■□□□ 1.21
PML-203ENST00000354026 ABCC9O60706 1549 aa22.55■■□□□ 1.2
PML-203ENST00000354026 RB1CC1Q8TDY2 1594 aa22.45■■□□□ 1.18
PML-203ENST00000354026 MYT1Q01538 1121 aa22.38■■□□□ 1.17
PML-203ENST00000354026 CECR2Q9BXF3 1484 aa22.35■■□□□ 1.17
PML-203ENST00000354026 TTBK1Q5TCY1 1321 aaPredicted RBP22.29■■□□□ 1.16
PML-203ENST00000354026 MROH2BQ7Z745 1585 aa22.18■■□□□ 1.14
PML-203ENST00000354026 ZEB1P37275 1124 aaPredicted RBP22.11■■□□□ 1.13
PML-203ENST00000354026 NEUROD1Q13562 356 aa22.08■■□□□ 1.13
PML-203ENST00000354026 WIZO95785 1651 aa22.06■■□□□ 1.12
PML-203ENST00000354026 ACIN1Q9UKV3 1341 aaKnown RBP22.06■■□□□ 1.12
PML-203ENST00000354026 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.05■■□□□ 1.12
PML-203ENST00000354026 GTF3C3Q9Y5Q9 886 aa22.03■■□□□ 1.12
PML-203ENST00000354026 NACADO15069 1562 aa21.93■■□□□ 1.1
PML-203ENST00000354026 CCER1Q8TC90 406 aaPredicted RBP21.9■■□□□ 1.1
PML-203ENST00000354026 PABPN1Q86U42 306 aaKnown RBP eCLIP21.81■■□□□ 1.08
PML-203ENST00000354026 ABCC8Q09428 1581 aa21.81■■□□□ 1.08
PML-203ENST00000354026 UBTFP17480 764 aaKnown RBP21.74■■□□□ 1.07
PML-203ENST00000354026 CENPBP07199 599 aaPredicted RBP21.73■■□□□ 1.07
PML-203ENST00000354026 CCDC88BA6NC98 1476 aa21.73■■□□□ 1.07
PML-203ENST00000354026 RANGAP1P46060 587 aaPredicted RBP21.69■■□□□ 1.06
PML-203ENST00000354026 BAZ1AQ9NRL2 1556 aaPredicted RBP21.67■■□□□ 1.06
PML-203ENST00000354026 SOGA1O94964 1423 aa21.67■■□□□ 1.06
PML-203ENST00000354026 RUSC2Q8N2Y8 1516 aa21.58■■□□□ 1.04
PML-203ENST00000354026 DIEXFQ68CQ4 756 aaKnown RBP21.58■■□□□ 1.04
PML-203ENST00000354026 CEP162Q5TB80 1403 aa21.55■■□□□ 1.04
PML-203ENST00000354026 CSRNP3Q8WYN3 585 aa21.52■■□□□ 1.04
PML-203ENST00000354026 YTHDC1Q96MU7 727 aaKnown RBP21.51■■□□□ 1.03
PML-203ENST00000354026 EIF4G1Q04637 1599 aaKnown RBP21.5■■□□□ 1.03
PML-203ENST00000354026 TOP2AP11388 1531 aaKnown RBP21.49■■□□□ 1.03
PML-203ENST00000354026 SMARCA4P51532 1647 aa21.48■■□□□ 1.03
PML-203ENST00000354026 HNRNPUL2Q1KMD3 747 aaKnown RBP21.47■■□□□ 1.03
PML-203ENST00000354026 SMARCA2P51531 1590 aa21.45■■□□□ 1.03
PML-203ENST00000354026 TNIKQ9UKE5 1360 aa21.33■■□□□ 1.01
PML-203ENST00000354026 UNC13AQ9UPW8 1703 aa21.31■■□□□ 1
PML-203ENST00000354026 WRNQ14191 1432 aaPredicted RBP eCLIP21.27■■□□□ 1
PML-203ENST00000354026 BCL11AQ9H165 835 aa21.22■□□□□ 0.99
PML-203ENST00000354026 GOLGA3Q08378 1498 aa21.2■□□□□ 0.98
PML-203ENST00000354026 APLP2Q06481 763 aa21.19■□□□□ 0.98
PML-203ENST00000354026 ZNF316A6NFI3 1004 aaPredicted RBP21.15■□□□□ 0.98
PML-203ENST00000354026 CLIP1P30622 1438 aa21.12■□□□□ 0.97
PML-203ENST00000354026 EEA1Q15075 1411 aa21.11■□□□□ 0.97
PML-203ENST00000354026 SYNJ1O43426 1573 aa21.11■□□□□ 0.97
PML-203ENST00000354026 BICRAQ9NZM4 1560 aa21.1■□□□□ 0.97
PML-203ENST00000354026 RAPGEF2Q9Y4G8 1499 aa21.05■□□□□ 0.96
PML-203ENST00000354026 MIER1Q8N108 512 aa21.05■□□□□ 0.96
PML-203ENST00000354026 CEP164Q9UPV0 1460 aa21.03■□□□□ 0.96
PML-203ENST00000354026 BAZ1BQ9UIG0 1483 aaKnown RBP21.01■□□□□ 0.95
PML-203ENST00000354026 ATAD2BQ9ULI0 1458 aa20.98■□□□□ 0.95
PML-203ENST00000354026 ITGAEP38570 1179 aa20.98■□□□□ 0.95
PML-203ENST00000354026 ANP32EQ9BTT0 268 aa20.96■□□□□ 0.95
PML-203ENST00000354026 VPS8Q8N3P4 1428 aa20.92■□□□□ 0.94
PML-203ENST00000354026 KANK4Q5T7N3 995 aaPredicted RBP20.89■□□□□ 0.94
PML-203ENST00000354026 KIF21BO75037 1637 aa20.81■□□□□ 0.92
PML-203ENST00000354026 TSHZ2Q9NRE2 1034 aa20.79■□□□□ 0.92
PML-203ENST00000354026 PEG3Q9GZU2 1588 aa20.79■□□□□ 0.92
PML-203ENST00000354026 SUPT16HQ9Y5B9 1047 aaKnown RBP20.79■□□□□ 0.92
PML-203ENST00000354026 ATP1B4Q9UN42 357 aaPredicted RBP20.72■□□□□ 0.91
PML-203ENST00000354026 P3H3Q8IVL6 736 aa20.67■□□□□ 0.9
PML-203ENST00000354026 TOP2BQ02880 1626 aa20.65■□□□□ 0.9
PML-203ENST00000354026 ARAP1Q96P48 1450 aa20.64■□□□□ 0.9
PML-203ENST00000354026 DHX57Q6P158 1386 aaKnown RBP20.64■□□□□ 0.89
PML-203ENST00000354026 CUX1P39880 1505 aa20.57■□□□□ 0.88
PML-203ENST00000354026 PRXQ9BXM0 1461 aa20.57■□□□□ 0.88
PML-203ENST00000354026 BCANQ96GW7 911 aa20.56■□□□□ 0.88
PML-203ENST00000354026 KIF27Q86VH2 1401 aa20.55■□□□□ 0.88
PML-203ENST00000354026 PRKCSHP14314 528 aaPredicted RBP20.55■□□□□ 0.88
PML-203ENST00000354026 FAM50AQ14320 339 aaKnown RBP20.53■□□□□ 0.88
PML-203ENST00000354026 KCNH8Q96L42 1107 aa20.5■□□□□ 0.87
PML-203ENST00000354026 HIRIP3Q9BW71 556 aaPredicted RBP20.48■□□□□ 0.87
PML-203ENST00000354026 CCNB3Q8WWL7 1395 aa20.47■□□□□ 0.87
PML-203ENST00000354026 BIVM-ERCC5R4GMW8 1640 aa20.46■□□□□ 0.87
PML-203ENST00000354026 CUX2O14529 1486 aa20.46■□□□□ 0.87
PML-203ENST00000354026 ARHGAP35Q9NRY4 1499 aa20.46■□□□□ 0.87
PML-203ENST00000354026 SIN3AQ96ST3 1273 aa20.44■□□□□ 0.86
PML-203ENST00000354026 ERICH3Q5RHP9 1530 aa20.43■□□□□ 0.86
PML-203ENST00000354026 NCAPD3P42695 1498 aa20.41■□□□□ 0.86
PML-203ENST00000354026 CLSPNQ9HAW4 1339 aa20.4■□□□□ 0.86
PML-203ENST00000354026 RAB3GAP2Q9H2M9 1393 aa20.39■□□□□ 0.86
PML-203ENST00000354026 IGF1RP08069 1367 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 157.7 ms