RNA–Protein interactions for RNA: ENST00000409419.5

PLD3-205, Transcript of phospholipase D family member 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PLD3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLD3-205ENST00000409419 NISCHQ9Y2I1 1504 aa41.99■■■■■ 4.31
PLD3-205ENST00000409419 CCDC180Q9P1Z9 1646 aa36.73■■■■□ 3.47
PLD3-205ENST00000409419 ZCCHC6Q5VYS8 1495 aaKnown RBP35.22■■■■□ 3.23
PLD3-205ENST00000409419 ABCC9O60706 1549 aa35■■■■□ 3.19
PLD3-205ENST00000409419 DCAF1Q9Y4B6 1507 aa34.76■■■■□ 3.15
PLD3-205ENST00000409419 DCAF8L2P0C7V8 631 aa34.71■■■■□ 3.15
PLD3-205ENST00000409419 MYO15BQ96JP2 1530 aa34.48■■■■□ 3.11
PLD3-205ENST00000409419 NACADO15069 1562 aa34.31■■■■□ 3.08
PLD3-205ENST00000409419 RB1CC1Q8TDY2 1594 aa34.07■■■■□ 3.05
PLD3-205ENST00000409419 SHROOM4Q9ULL8 1493 aa33.95■■■■□ 3.03
PLD3-205ENST00000409419 SCRIBQ14160 1630 aa33.69■■■□□ 2.98
PLD3-205ENST00000409419 UNC13AQ9UPW8 1703 aa33.3■■■□□ 2.92
PLD3-205ENST00000409419 BICRAQ9NZM4 1560 aa33.05■■■□□ 2.88
PLD3-205ENST00000409419 PABPN1Q86U42 306 aaKnown RBP eCLIP32.95■■■□□ 2.87
PLD3-205ENST00000409419 CECR2Q9BXF3 1484 aa32.63■■■□□ 2.81
PLD3-205ENST00000409419 SUPT5HO00267 1087 aaKnown RBP32.52■■■□□ 2.8
PLD3-205ENST00000409419 RSF1Q96T23 1441 aaPredicted RBP32.46■■■□□ 2.79
PLD3-205ENST00000409419 BAZ1AQ9NRL2 1556 aaPredicted RBP32.44■■■□□ 2.78
PLD3-205ENST00000409419 MROH2BQ7Z745 1585 aa32.41■■■□□ 2.78
PLD3-205ENST00000409419 SMARCA4P51532 1647 aa32.31■■■□□ 2.76
PLD3-205ENST00000409419 EIF4G1Q04637 1599 aaKnown RBP32.09■■■□□ 2.73
PLD3-205ENST00000409419 WIZO95785 1651 aa32.08■■■□□ 2.73
PLD3-205ENST00000409419 PEG3Q9GZU2 1588 aa31.99■■■□□ 2.71
PLD3-205ENST00000409419 ATAD2BQ9ULI0 1458 aa31.9■■■□□ 2.7
PLD3-205ENST00000409419 SMARCA2P51531 1590 aa31.86■■■□□ 2.69
PLD3-205ENST00000409419 TOP2AP11388 1531 aaKnown RBP31.79■■■□□ 2.68
PLD3-205ENST00000409419 NCAPD3P42695 1498 aa31.7■■■□□ 2.67
PLD3-205ENST00000409419 BAZ1BQ9UIG0 1483 aaKnown RBP31.68■■■□□ 2.66
PLD3-205ENST00000409419 CC2D2AQ9P2K1 1620 aa31.67■■■□□ 2.66
PLD3-205ENST00000409419 HMGXB3Q12766 1538 aa31.61■■■□□ 2.65
PLD3-205ENST00000409419 CCDC88BA6NC98 1476 aa31.47■■■□□ 2.63
PLD3-205ENST00000409419 DNAJC5BQ9UF47 199 aa31.18■■■□□ 2.58
PLD3-205ENST00000409419 CHIC1Q5VXU3 224 aa31.01■■■□□ 2.56
PLD3-205ENST00000409419 CFTRP13569 1480 aa30.9■■■□□ 2.54
PLD3-205ENST00000409419 CADPSQ9ULU8 1353 aa30.86■■■□□ 2.53
PLD3-205ENST00000409419 ABCC8Q09428 1581 aa30.66■■■□□ 2.5
PLD3-205ENST00000409419 LAMC3Q9Y6N6 1575 aa30.64■■■□□ 2.5
PLD3-205ENST00000409419 TRIM41Q8WV44 630 aa30.64■■■□□ 2.5
PLD3-205ENST00000409419 NESP48681 1621 aa30.63■■■□□ 2.49
PLD3-205ENST00000409419 PRDM2Q13029 1718 aa30.61■■■□□ 2.49
PLD3-205ENST00000409419 WRNQ14191 1432 aaPredicted RBP eCLIP30.56■■■□□ 2.48
PLD3-205ENST00000409419 FANCD2Q9BXW9 1451 aa30.49■■■□□ 2.47
PLD3-205ENST00000409419 PDS5BQ9NTI5 1447 aa30.43■■■□□ 2.46
PLD3-205ENST00000409419 SYNJ1O43426 1573 aa30.41■■■□□ 2.46
PLD3-205ENST00000409419 CUX1P39880 1505 aa30.33■■■□□ 2.45
PLD3-205ENST00000409419 TOP2BQ02880 1626 aa30.33■■■□□ 2.45
PLD3-205ENST00000409419 CEP164Q9UPV0 1460 aa30.32■■■□□ 2.44
PLD3-205ENST00000409419 BIVM-ERCC5R4GMW8 1640 aa30.29■■■□□ 2.44
PLD3-205ENST00000409419 KIF21AQ7Z4S6 1674 aa30.22■■■□□ 2.43
PLD3-205ENST00000409419 DNMBPQ6XZF7 1577 aa30.15■■■□□ 2.42
PLD3-205ENST00000409419 URB2Q14146 1524 aaKnown RBP30.12■■■□□ 2.41
PLD3-205ENST00000409419 TOPBP1Q92547 1522 aa30.12■■■□□ 2.41
PLD3-205ENST00000409419 SOGA1O94964 1423 aa30.05■■■□□ 2.4
PLD3-205ENST00000409419 ERCC6Q03468 1493 aa30.04■■■□□ 2.4
PLD3-205ENST00000409419 FGD5Q6ZNL6 1462 aa30.04■■■□□ 2.4
PLD3-205ENST00000409419 MRC2Q9UBG0 1479 aa30.04■■■□□ 2.4
PLD3-205ENST00000409419 FAM9AQ8IZU1 332 aaPredicted RBP30.01■■■□□ 2.4
PLD3-205ENST00000409419 EEA1Q15075 1411 aa29.97■■■□□ 2.39
PLD3-205ENST00000409419 POLA1P09884 1462 aaPredicted RBP29.96■■■□□ 2.39
PLD3-205ENST00000409419 RUSC2Q8N2Y8 1516 aa29.94■■■□□ 2.38
PLD3-205ENST00000409419 WDR62O43379 1518 aa29.9■■■□□ 2.38
PLD3-205ENST00000409419 THOC2Q8NI27 1593 aaKnown RBP29.85■■■□□ 2.37
PLD3-205ENST00000409419 RAD54L2Q9Y4B4 1467 aa29.83■■■□□ 2.37
PLD3-205ENST00000409419 CSRNP3Q8WYN3 585 aa29.82■■■□□ 2.36
PLD3-205ENST00000409419 KIF27Q86VH2 1401 aa29.82■■■□□ 2.36
PLD3-205ENST00000409419 ABCA10Q8WWZ4 1543 aa29.8■■■□□ 2.36
PLD3-205ENST00000409419 CUX2O14529 1486 aa29.78■■■□□ 2.36
PLD3-205ENST00000409419 LOC105371045A0A1W2PR82 267 aa29.78■■■□□ 2.36
PLD3-205ENST00000409419 TARBP1Q13395 1621 aaKnown RBP29.69■■■□□ 2.34
PLD3-205ENST00000409419 WDR97A6NE52 1622 aa29.67■■■□□ 2.34
PLD3-205ENST00000409419 IFT140Q96RY7 1462 aa29.64■■■□□ 2.33
PLD3-205ENST00000409419 IGF1RP08069 1367 aa29.6■■■□□ 2.33
PLD3-205ENST00000409419 TDRD9Q8NDG6 1382 aaKnown RBP29.58■■■□□ 2.33
PLD3-205ENST00000409419 KIF21BO75037 1637 aa29.56■■■□□ 2.32
PLD3-205ENST00000409419 EHMT2Q96KQ7 1210 aa29.55■■■□□ 2.32
PLD3-205ENST00000409419 PRXQ9BXM0 1461 aa29.55■■■□□ 2.32
PLD3-205ENST00000409419 ABCA5Q8WWZ7 1642 aa29.55■■■□□ 2.32
PLD3-205ENST00000409419 GAPVD1Q14C86 1478 aa29.52■■■□□ 2.32
PLD3-205ENST00000409419 GOLGA3Q08378 1498 aa29.51■■■□□ 2.31
PLD3-205ENST00000409419 ZNF608Q9ULD9 1512 aaPredicted RBP29.46■■■□□ 2.31
PLD3-205ENST00000409419 RAPGEF2Q9Y4G8 1499 aa29.46■■■□□ 2.31
PLD3-205ENST00000409419 AQRO60306 1485 aaKnown RBP eCLIP29.45■■■□□ 2.34e-8■■■■■ 31.9
PLD3-205ENST00000409419 ERICH3Q5RHP9 1530 aa29.44■■■□□ 2.3
PLD3-205ENST00000409419 CARMIL1Q5VZK9 1371 aa29.43■■■□□ 2.3
PLD3-205ENST00000409419 TNIKQ9UKE5 1360 aa29.38■■■□□ 2.29
PLD3-205ENST00000409419 UBTFP17480 764 aaKnown RBP29.37■■■□□ 2.29
PLD3-205ENST00000409419 GRIN2BQ13224 1484 aa29.35■■■□□ 2.29
PLD3-205ENST00000409419 CUL7Q14999 1698 aa29.35■■■□□ 2.29
PLD3-205ENST00000409419 EIF4G3O43432 1585 aaKnown RBP29.33■■■□□ 2.29
PLD3-205ENST00000409419 PBRM1Q86U86 1689 aa29.3■■■□□ 2.28
PLD3-205ENST00000409419 FHAD1B1AJZ9 1412 aa29.21■■■□□ 2.27
PLD3-205ENST00000409419 ADAMTS12P58397 1594 aa29.19■■■□□ 2.26
PLD3-205ENST00000409419 CEP162Q5TB80 1403 aa29.18■■■□□ 2.26
PLD3-205ENST00000409419 SNAPC4Q5SXM2 1469 aa29.17■■■□□ 2.26
PLD3-205ENST00000409419 MAGI1Q96QZ7 1491 aaPredicted RBP29.14■■■□□ 2.26
PLD3-205ENST00000409419 CLIP1P30622 1438 aa29.03■■■□□ 2.24
PLD3-205ENST00000409419 SYNJ2O15056 1496 aa29.02■■■□□ 2.24
PLD3-205ENST00000409419 GRIN2AQ12879 1464 aa28.98■■■□□ 2.23
PLD3-205ENST00000409419 CHMP7Q8WUX9 453 aaPredicted RBP28.96■■■□□ 2.23
PLD3-205ENST00000409419 RANGAP1P46060 587 aaPredicted RBP28.93■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms