Protein–RNA interactions for Protein: D6RIA3

LOC285556, Uncharacterized protein, humanhuman

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC285556D6RIA3 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
LOC285556D6RIA3 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LOC285556D6RIA3 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
LOC285556D6RIA3 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC18.25■□□□□ 0.51
LOC285556D6RIA3 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LOC285556D6RIA3 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LOC285556D6RIA3 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
LOC285556D6RIA3 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LOC285556D6RIA3 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.25■□□□□ 0.51
LOC285556D6RIA3 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LOC285556D6RIA3 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LOC285556D6RIA3 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC18.25■□□□□ 0.51
LOC285556D6RIA3 BRF1-202ENST00000379932 884 ntTSL 5 BASIC18.25■□□□□ 0.51
LOC285556D6RIA3 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC18.25■□□□□ 0.51
LOC285556D6RIA3 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC18.25■□□□□ 0.51
LOC285556D6RIA3 C2orf69P2-201ENST00000562032 1123 ntBASIC18.25■□□□□ 0.51
LOC285556D6RIA3 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LOC285556D6RIA3 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC18.24■□□□□ 0.51
LOC285556D6RIA3 USE1-206ENST00000595101 1776 ntTSL 2 BASIC18.24■□□□□ 0.51
LOC285556D6RIA3 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
LOC285556D6RIA3 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LOC285556D6RIA3 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LOC285556D6RIA3 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LOC285556D6RIA3 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LOC285556D6RIA3 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LOC285556D6RIA3 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
LOC285556D6RIA3 MTHFR-217ENST00000641820 1569 ntBASIC18.24■□□□□ 0.51
LOC285556D6RIA3 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
LOC285556D6RIA3 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LOC285556D6RIA3 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.24■□□□□ 0.51
LOC285556D6RIA3 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
LOC285556D6RIA3 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
LOC285556D6RIA3 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LOC285556D6RIA3 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LOC285556D6RIA3 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LOC285556D6RIA3 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC18.24■□□□□ 0.51
LOC285556D6RIA3 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LOC285556D6RIA3 AP001063.1-201ENST00000568332 529 ntBASIC18.24■□□□□ 0.51
LOC285556D6RIA3 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LOC285556D6RIA3 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC18.24■□□□□ 0.51
LOC285556D6RIA3 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
LOC285556D6RIA3 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.24■□□□□ 0.51
LOC285556D6RIA3 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LOC285556D6RIA3 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC18.23■□□□□ 0.51
LOC285556D6RIA3 AC134312.5-201ENST00000568031 1313 ntBASIC18.23■□□□□ 0.51
LOC285556D6RIA3 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC18.23■□□□□ 0.51
LOC285556D6RIA3 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC18.23■□□□□ 0.51
LOC285556D6RIA3 DRD5P1-201ENST00000456605 1438 ntBASIC18.23■□□□□ 0.51
LOC285556D6RIA3 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LOC285556D6RIA3 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LOC285556D6RIA3 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC18.23■□□□□ 0.51
LOC285556D6RIA3 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC18.23■□□□□ 0.51
LOC285556D6RIA3 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.23■□□□□ 0.51
LOC285556D6RIA3 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LOC285556D6RIA3 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LOC285556D6RIA3 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LOC285556D6RIA3 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
LOC285556D6RIA3 OLR1-203ENST00000432556 950 ntTSL 2 BASIC18.23■□□□□ 0.51
LOC285556D6RIA3 YBX1P6-201ENST00000442962 1002 ntBASIC18.23■□□□□ 0.51
LOC285556D6RIA3 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC18.23■□□□□ 0.51
LOC285556D6RIA3 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LOC285556D6RIA3 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC18.23■□□□□ 0.51
LOC285556D6RIA3 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LOC285556D6RIA3 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LOC285556D6RIA3 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
LOC285556D6RIA3 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LOC285556D6RIA3 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LOC285556D6RIA3 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC18.23■□□□□ 0.51
LOC285556D6RIA3 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
LOC285556D6RIA3 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LOC285556D6RIA3 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LOC285556D6RIA3 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC18.22■□□□□ 0.51
LOC285556D6RIA3 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.22■□□□□ 0.51
LOC285556D6RIA3 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LOC285556D6RIA3 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LOC285556D6RIA3 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
LOC285556D6RIA3 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LOC285556D6RIA3 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LOC285556D6RIA3 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC18.22■□□□□ 0.51
LOC285556D6RIA3 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
LOC285556D6RIA3 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LOC285556D6RIA3 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LOC285556D6RIA3 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC18.22■□□□□ 0.51
LOC285556D6RIA3 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LOC285556D6RIA3 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LOC285556D6RIA3 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LOC285556D6RIA3 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
LOC285556D6RIA3 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LOC285556D6RIA3 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.22■□□□□ 0.51
LOC285556D6RIA3 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.22■□□□□ 0.51
LOC285556D6RIA3 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
LOC285556D6RIA3 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
LOC285556D6RIA3 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
LOC285556D6RIA3 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
LOC285556D6RIA3 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
LOC285556D6RIA3 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC18.22■□□□□ 0.51
LOC285556D6RIA3 RNU1-114P-201ENST00000365297 166 ntBASIC18.22■□□□□ 0.51
LOC285556D6RIA3 GUK1-206ENST00000366723 845 ntTSL 5 BASIC18.22■□□□□ 0.51
LOC285556D6RIA3 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC18.22■□□□□ 0.51
LOC285556D6RIA3 AC025279.2-201ENST00000569730 653 ntBASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms