RNA–Protein interactions for RNA: ENST00000408901.7

NGDN-202, Transcript of neuroguidin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NGDN, Length 1,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NGDN-202ENST00000408901 NISCHQ9Y2I1 1504 aa37.18■■■■□ 3.54
NGDN-202ENST00000408901 CCDC180Q9P1Z9 1646 aa32.99■■■□□ 2.87
NGDN-202ENST00000408901 ABCC9O60706 1549 aa32.49■■■□□ 2.79
NGDN-202ENST00000408901 DCAF8L2P0C7V8 631 aa31.2■■■□□ 2.59
NGDN-202ENST00000408901 RB1CC1Q8TDY2 1594 aa31.11■■■□□ 2.57
NGDN-202ENST00000408901 NACADO15069 1562 aa31.06■■■□□ 2.56
NGDN-202ENST00000408901 ZCCHC6Q5VYS8 1495 aaKnown RBP30.92■■■□□ 2.54
NGDN-202ENST00000408901 MYO15BQ96JP2 1530 aa30.83■■■□□ 2.53
NGDN-202ENST00000408901 DCAF1Q9Y4B6 1507 aa30.69■■■□□ 2.5
NGDN-202ENST00000408901 UNC13AQ9UPW8 1703 aa30.47■■■□□ 2.47
NGDN-202ENST00000408901 PABPN1Q86U42 306 aaKnown RBP eCLIP30.42■■■□□ 2.46
NGDN-202ENST00000408901 BICRAQ9NZM4 1560 aa30.28■■■□□ 2.44
NGDN-202ENST00000408901 SCRIBQ14160 1630 aa30.18■■■□□ 2.42
NGDN-202ENST00000408901 DNAJC5BQ9UF47 199 aa30.03■■■□□ 2.4
NGDN-202ENST00000408901 SHROOM4Q9ULL8 1493 aa29.76■■■□□ 2.35
NGDN-202ENST00000408901 EIF4G1Q04637 1599 aaKnown RBP29.43■■■□□ 2.3
NGDN-202ENST00000408901 CC2D2AQ9P2K1 1620 aa29.34■■■□□ 2.29
NGDN-202ENST00000408901 CECR2Q9BXF3 1484 aa29.16■■■□□ 2.26
NGDN-202ENST00000408901 SMARCA4P51532 1647 aa28.84■■■□□ 2.21
NGDN-202ENST00000408901 BAZ1AQ9NRL2 1556 aaPredicted RBP28.76■■■□□ 2.19
NGDN-202ENST00000408901 ATAD2BQ9ULI0 1458 aa28.73■■■□□ 2.19
NGDN-202ENST00000408901 NCAPD3P42695 1498 aa28.72■■■□□ 2.19
NGDN-202ENST00000408901 MROH2BQ7Z745 1585 aa28.7■■■□□ 2.18
NGDN-202ENST00000408901 SMARCA2P51531 1590 aa28.62■■■□□ 2.17
NGDN-202ENST00000408901 PEG3Q9GZU2 1588 aa28.54■■■□□ 2.16
NGDN-202ENST00000408901 HMGXB3Q12766 1538 aa28.5■■■□□ 2.15
NGDN-202ENST00000408901 BAZ1BQ9UIG0 1483 aaKnown RBP28.46■■■□□ 2.15
NGDN-202ENST00000408901 WIZO95785 1651 aa28.38■■■□□ 2.13
NGDN-202ENST00000408901 RSF1Q96T23 1441 aaPredicted RBP28.35■■■□□ 2.13
NGDN-202ENST00000408901 NESP48681 1621 aa28.12■■■□□ 2.09
NGDN-202ENST00000408901 DNAJC5Q9H3Z4 198 aa28.08■■■□□ 2.09
NGDN-202ENST00000408901 TOP2AP11388 1531 aaKnown RBP27.99■■■□□ 2.07
NGDN-202ENST00000408901 ERCC6Q03468 1493 aa27.93■■■□□ 2.06
NGDN-202ENST00000408901 LAMC3Q9Y6N6 1575 aa27.92■■■□□ 2.06
NGDN-202ENST00000408901 CADPSQ9ULU8 1353 aa27.89■■■□□ 2.06
NGDN-202ENST00000408901 PDS5BQ9NTI5 1447 aa27.75■■■□□ 2.03
NGDN-202ENST00000408901 CCDC88BA6NC98 1476 aa27.75■■■□□ 2.03
NGDN-202ENST00000408901 KIF21AQ7Z4S6 1674 aa27.72■■■□□ 2.03
NGDN-202ENST00000408901 CFTRP13569 1480 aa27.7■■■□□ 2.02
NGDN-202ENST00000408901 CUX2O14529 1486 aa27.64■■■□□ 2.01
NGDN-202ENST00000408901 SUPT5HO00267 1087 aaKnown RBP27.63■■■□□ 2.01
NGDN-202ENST00000408901 THOC2Q8NI27 1593 aaKnown RBP27.61■■■□□ 2.01
NGDN-202ENST00000408901 FANCD2Q9BXW9 1451 aa27.56■■■□□ 2
NGDN-202ENST00000408901 CEP164Q9UPV0 1460 aa27.49■■□□□ 1.99
NGDN-202ENST00000408901 MRC2Q9UBG0 1479 aa27.47■■□□□ 1.99
NGDN-202ENST00000408901 PRDM2Q13029 1718 aa27.39■■□□□ 1.98
NGDN-202ENST00000408901 WDR62O43379 1518 aa27.38■■□□□ 1.97
NGDN-202ENST00000408901 URB2Q14146 1524 aaKnown RBP27.31■■□□□ 1.96
NGDN-202ENST00000408901 TOPBP1Q92547 1522 aa27.11■■□□□ 1.93
NGDN-202ENST00000408901 ABCC8Q09428 1581 aa27.04■■□□□ 1.92
NGDN-202ENST00000408901 DNMBPQ6XZF7 1577 aa27.03■■□□□ 1.92
NGDN-202ENST00000408901 IFT140Q96RY7 1462 aa26.92■■□□□ 1.9
NGDN-202ENST00000408901 CUX1P39880 1505 aa26.9■■□□□ 1.9
NGDN-202ENST00000408901 ZNF608Q9ULD9 1512 aaPredicted RBP26.9■■□□□ 1.9
NGDN-202ENST00000408901 POLA1P09884 1462 aaPredicted RBP26.87■■□□□ 1.89
NGDN-202ENST00000408901 TARBP1Q13395 1621 aaKnown RBP26.83■■□□□ 1.88
NGDN-202ENST00000408901 RAD54L2Q9Y4B4 1467 aa26.82■■□□□ 1.88
NGDN-202ENST00000408901 FGD5Q6ZNL6 1462 aa26.81■■□□□ 1.88
NGDN-202ENST00000408901 SOGA1O94964 1423 aa26.8■■□□□ 1.88
NGDN-202ENST00000408901 AQRO60306 1485 aaKnown RBP eCLIP26.74■■□□□ 1.873e-7■■■■■ 36
NGDN-202ENST00000408901 EIF4G3O43432 1585 aaKnown RBP26.7■■□□□ 1.86
NGDN-202ENST00000408901 TDRD9Q8NDG6 1382 aaKnown RBP26.69■■□□□ 1.86
NGDN-202ENST00000408901 WRNQ14191 1432 aaPredicted RBP eCLIP26.68■■□□□ 1.86
NGDN-202ENST00000408901 SYNJ1O43426 1573 aa26.63■■□□□ 1.85
NGDN-202ENST00000408901 TOP2BQ02880 1626 aa26.61■■□□□ 1.85
NGDN-202ENST00000408901 BIVM-ERCC5R4GMW8 1640 aa26.59■■□□□ 1.85
NGDN-202ENST00000408901 OSCARQ8IYS5 282 aa26.57■■□□□ 1.84
NGDN-202ENST00000408901 WDR97A6NE52 1622 aa26.54■■□□□ 1.84
NGDN-202ENST00000408901 ABCA10Q8WWZ4 1543 aa26.52■■□□□ 1.84
NGDN-202ENST00000408901 GAPVD1Q14C86 1478 aa26.45■■□□□ 1.82
NGDN-202ENST00000408901 GRIN2BQ13224 1484 aa26.43■■□□□ 1.82
NGDN-202ENST00000408901 SNAPC4Q5SXM2 1469 aa26.43■■□□□ 1.82
NGDN-202ENST00000408901 FBLN2P98095 1184 aa26.43■■□□□ 1.82
NGDN-202ENST00000408901 ABCA5Q8WWZ7 1642 aa26.4■■□□□ 1.82
NGDN-202ENST00000408901 CHD1O14646 1710 aa26.4■■□□□ 1.82
NGDN-202ENST00000408901 TRIM41Q8WV44 630 aa26.4■■□□□ 1.82
NGDN-202ENST00000408901 PBRM1Q86U86 1689 aa26.36■■□□□ 1.81
NGDN-202ENST00000408901 MAGI1Q96QZ7 1491 aaPredicted RBP26.35■■□□□ 1.81
NGDN-202ENST00000408901 CHMP7Q8WUX9 453 aaPredicted RBP26.32■■□□□ 1.8
NGDN-202ENST00000408901 SYNJ2O15056 1496 aa26.27■■□□□ 1.8
NGDN-202ENST00000408901 ERICH3Q5RHP9 1530 aa26.17■■□□□ 1.78
NGDN-202ENST00000408901 ADAMTS12P58397 1594 aa26.15■■□□□ 1.78
NGDN-202ENST00000408901 FHAD1B1AJZ9 1412 aa26.13■■□□□ 1.77
NGDN-202ENST00000408901 RIMBP3CA6NJZ7 1639 aa26.12■■□□□ 1.77
NGDN-202ENST00000408901 RIMBP3BA6NNM3 1639 aa26.12■■□□□ 1.77
NGDN-202ENST00000408901 RIMBP3Q9UFD9 1639 aa26.12■■□□□ 1.77
NGDN-202ENST00000408901 CLASP1Q7Z460 1538 aa26.11■■□□□ 1.77
NGDN-202ENST00000408901 KIF27Q86VH2 1401 aa26.11■■□□□ 1.77
NGDN-202ENST00000408901 GRIN2AQ12879 1464 aa26.11■■□□□ 1.77
NGDN-202ENST00000408901 IGF1RP08069 1367 aa26.1■■□□□ 1.77
NGDN-202ENST00000408901 ARHGEF11O15085 1522 aa26.1■■□□□ 1.77
NGDN-202ENST00000408901 CEP170Q5SW79 1584 aa26■■□□□ 1.75
NGDN-202ENST00000408901 NUP160Q12769 1436 aa26■■□□□ 1.75
NGDN-202ENST00000408901 RUSC2Q8N2Y8 1516 aa25.98■■□□□ 1.75
NGDN-202ENST00000408901 CYB5RLQ6IPT4 315 aa25.95■■□□□ 1.74
NGDN-202ENST00000408901 ARAP1Q96P48 1450 aa25.91■■□□□ 1.74
NGDN-202ENST00000408901 CARMIL1Q5VZK9 1371 aa25.91■■□□□ 1.74
NGDN-202ENST00000408901 CUL7Q14999 1698 aa25.89■■□□□ 1.73
NGDN-202ENST00000408901 ERCC6L2Q5T890 1561 aa25.83■■□□□ 1.73
NGDN-202ENST00000408901 JPH4Q96JJ6 628 aa25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms