RNA–Protein interactions for RNA: ENST00000452952.1

AP000552.1-208, humanhuman

TSL 4 BASIC

Gene AP000552.1, Length 576 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000552.1-208ENST00000452952 NISCHQ9Y2I1 1504 aa37.34■■■■□ 3.57
AP000552.1-208ENST00000452952 CCDC180Q9P1Z9 1646 aa33.23■■■□□ 2.91
AP000552.1-208ENST00000452952 ABCC9O60706 1549 aa32.8■■■□□ 2.84
AP000552.1-208ENST00000452952 RB1CC1Q8TDY2 1594 aa31.45■■■□□ 2.63
AP000552.1-208ENST00000452952 NACADO15069 1562 aa31.38■■■□□ 2.61
AP000552.1-208ENST00000452952 DCAF8L2P0C7V8 631 aa31.31■■■□□ 2.6
AP000552.1-208ENST00000452952 MYO15BQ96JP2 1530 aa31.17■■■□□ 2.58
AP000552.1-208ENST00000452952 ZCCHC6Q5VYS8 1495 aaKnown RBP31.06■■■□□ 2.56
AP000552.1-208ENST00000452952 DCAF1Q9Y4B6 1507 aa30.92■■■□□ 2.54
AP000552.1-208ENST00000452952 PABPN1Q86U42 306 aaKnown RBP eCLIP30.64■■■□□ 2.5
AP000552.1-208ENST00000452952 UNC13AQ9UPW8 1703 aa30.5■■■□□ 2.47
AP000552.1-208ENST00000452952 BICRAQ9NZM4 1560 aa30.46■■■□□ 2.47
AP000552.1-208ENST00000452952 DNAJC5BQ9UF47 199 aa30.35■■■□□ 2.45
AP000552.1-208ENST00000452952 SCRIBQ14160 1630 aa30.29■■■□□ 2.44
AP000552.1-208ENST00000452952 SHROOM4Q9ULL8 1493 aa30.25■■■□□ 2.43
AP000552.1-208ENST00000452952 EIF4G1Q04637 1599 aaKnown RBP29.71■■■□□ 2.35
AP000552.1-208ENST00000452952 CC2D2AQ9P2K1 1620 aa29.62■■■□□ 2.33
AP000552.1-208ENST00000452952 CECR2Q9BXF3 1484 aa29.53■■■□□ 2.32
AP000552.1-208ENST00000452952 NCAPD3P42695 1498 aa29■■■□□ 2.23
AP000552.1-208ENST00000452952 SMARCA4P51532 1647 aa28.97■■■□□ 2.23
AP000552.1-208ENST00000452952 BAZ1AQ9NRL2 1556 aaPredicted RBP28.96■■■□□ 2.23
AP000552.1-208ENST00000452952 ATAD2BQ9ULI0 1458 aa28.95■■■□□ 2.22
AP000552.1-208ENST00000452952 SMARCA2P51531 1590 aa28.89■■■□□ 2.22
AP000552.1-208ENST00000452952 HMGXB3Q12766 1538 aa28.79■■■□□ 2.2
AP000552.1-208ENST00000452952 MROH2BQ7Z745 1585 aa28.75■■■□□ 2.19
AP000552.1-208ENST00000452952 PEG3Q9GZU2 1588 aa28.74■■■□□ 2.19
AP000552.1-208ENST00000452952 BAZ1BQ9UIG0 1483 aaKnown RBP28.69■■■□□ 2.18
AP000552.1-208ENST00000452952 RSF1Q96T23 1441 aaPredicted RBP28.38■■■□□ 2.13
AP000552.1-208ENST00000452952 WIZO95785 1651 aa28.35■■■□□ 2.13
AP000552.1-208ENST00000452952 ERCC6Q03468 1493 aa28.32■■■□□ 2.12
AP000552.1-208ENST00000452952 NESP48681 1621 aa28.29■■■□□ 2.12
AP000552.1-208ENST00000452952 LAMC3Q9Y6N6 1575 aa28.21■■■□□ 2.11
AP000552.1-208ENST00000452952 CADPSQ9ULU8 1353 aa28.15■■■□□ 2.1
AP000552.1-208ENST00000452952 CUX2O14529 1486 aa28.14■■■□□ 2.09
AP000552.1-208ENST00000452952 TOP2AP11388 1531 aaKnown RBP28.12■■■□□ 2.09
AP000552.1-208ENST00000452952 PDS5BQ9NTI5 1447 aa28.11■■■□□ 2.09
AP000552.1-208ENST00000452952 CFTRP13569 1480 aa27.91■■■□□ 2.06
AP000552.1-208ENST00000452952 THOC2Q8NI27 1593 aaKnown RBP27.89■■■□□ 2.05
AP000552.1-208ENST00000452952 KIF21AQ7Z4S6 1674 aa27.83■■■□□ 2.05
AP000552.1-208ENST00000452952 CCDC88BA6NC98 1476 aa27.81■■■□□ 2.04
AP000552.1-208ENST00000452952 FANCD2Q9BXW9 1451 aa27.79■■■□□ 2.04
AP000552.1-208ENST00000452952 MRC2Q9UBG0 1479 aa27.79■■■□□ 2.04
AP000552.1-208ENST00000452952 CEP164Q9UPV0 1460 aa27.77■■■□□ 2.04
AP000552.1-208ENST00000452952 WDR62O43379 1518 aa27.68■■■□□ 2.02
AP000552.1-208ENST00000452952 DNAJC5Q9H3Z4 198 aa27.59■■■□□ 2.01
AP000552.1-208ENST00000452952 URB2Q14146 1524 aaKnown RBP27.5■■□□□ 1.99
AP000552.1-208ENST00000452952 SUPT5HO00267 1087 aaKnown RBP27.46■■□□□ 1.99
AP000552.1-208ENST00000452952 PRDM2Q13029 1718 aa27.44■■□□□ 1.98
AP000552.1-208ENST00000452952 ABCC8Q09428 1581 aa27.33■■□□□ 1.97
AP000552.1-208ENST00000452952 TOPBP1Q92547 1522 aa27.3■■□□□ 1.96
AP000552.1-208ENST00000452952 DNMBPQ6XZF7 1577 aa27.23■■□□□ 1.95
AP000552.1-208ENST00000452952 IFT140Q96RY7 1462 aa27.22■■□□□ 1.95
AP000552.1-208ENST00000452952 ZNF608Q9ULD9 1512 aaPredicted RBP27.07■■□□□ 1.92
AP000552.1-208ENST00000452952 POLA1P09884 1462 aaPredicted RBP27.06■■□□□ 1.92
AP000552.1-208ENST00000452952 CUX1P39880 1505 aa26.98■■□□□ 1.91
AP000552.1-208ENST00000452952 SOGA1O94964 1423 aa26.98■■□□□ 1.91
AP000552.1-208ENST00000452952 TARBP1Q13395 1621 aaKnown RBP26.97■■□□□ 1.91
AP000552.1-208ENST00000452952 OSCARQ8IYS5 282 aa26.96■■□□□ 1.91
AP000552.1-208ENST00000452952 FGD5Q6ZNL6 1462 aa26.94■■□□□ 1.9
AP000552.1-208ENST00000452952 RAD54L2Q9Y4B4 1467 aa26.93■■□□□ 1.9
AP000552.1-208ENST00000452952 AQRO60306 1485 aaKnown RBP eCLIP26.91■■□□□ 1.9
AP000552.1-208ENST00000452952 EIF4G3O43432 1585 aaKnown RBP26.91■■□□□ 1.9
AP000552.1-208ENST00000452952 TDRD9Q8NDG6 1382 aaKnown RBP26.84■■□□□ 1.89
AP000552.1-208ENST00000452952 WDR97A6NE52 1622 aa26.79■■□□□ 1.88
AP000552.1-208ENST00000452952 WRNQ14191 1432 aaPredicted RBP eCLIP26.77■■□□□ 1.88
AP000552.1-208ENST00000452952 ABCA10Q8WWZ4 1543 aa26.7■■□□□ 1.87
AP000552.1-208ENST00000452952 GRIN2BQ13224 1484 aa26.69■■□□□ 1.86
AP000552.1-208ENST00000452952 TOP2BQ02880 1626 aa26.68■■□□□ 1.86
AP000552.1-208ENST00000452952 FBLN2P98095 1184 aa26.66■■□□□ 1.86
AP000552.1-208ENST00000452952 SNAPC4Q5SXM2 1469 aa26.65■■□□□ 1.86
AP000552.1-208ENST00000452952 GAPVD1Q14C86 1478 aa26.64■■□□□ 1.86
AP000552.1-208ENST00000452952 MAGI1Q96QZ7 1491 aaPredicted RBP26.63■■□□□ 1.85
AP000552.1-208ENST00000452952 BIVM-ERCC5R4GMW8 1640 aa26.63■■□□□ 1.85
AP000552.1-208ENST00000452952 SYNJ1O43426 1573 aa26.63■■□□□ 1.85
AP000552.1-208ENST00000452952 CHMP7Q8WUX9 453 aaPredicted RBP26.58■■□□□ 1.85
AP000552.1-208ENST00000452952 ABCA5Q8WWZ7 1642 aa26.54■■□□□ 1.84
AP000552.1-208ENST00000452952 SYNJ2O15056 1496 aa26.54■■□□□ 1.84
AP000552.1-208ENST00000452952 CHD1O14646 1710 aa26.52■■□□□ 1.84
AP000552.1-208ENST00000452952 TRIM41Q8WV44 630 aa26.52■■□□□ 1.84
AP000552.1-208ENST00000452952 ARHGEF11O15085 1522 aa26.44■■□□□ 1.82
AP000552.1-208ENST00000452952 PBRM1Q86U86 1689 aa26.44■■□□□ 1.82
AP000552.1-208ENST00000452952 RIMBP3CA6NJZ7 1639 aa26.41■■□□□ 1.82
AP000552.1-208ENST00000452952 RIMBP3BA6NNM3 1639 aa26.41■■□□□ 1.82
AP000552.1-208ENST00000452952 RIMBP3Q9UFD9 1639 aa26.41■■□□□ 1.82
AP000552.1-208ENST00000452952 ERICH3Q5RHP9 1530 aa26.37■■□□□ 1.81
AP000552.1-208ENST00000452952 CLASP1Q7Z460 1538 aa26.37■■□□□ 1.81
AP000552.1-208ENST00000452952 FHAD1B1AJZ9 1412 aa26.35■■□□□ 1.81
AP000552.1-208ENST00000452952 ADAMTS12P58397 1594 aa26.32■■□□□ 1.8
AP000552.1-208ENST00000452952 GRIN2AQ12879 1464 aa26.31■■□□□ 1.8
AP000552.1-208ENST00000452952 KIF27Q86VH2 1401 aa26.25■■□□□ 1.79
AP000552.1-208ENST00000452952 CYB5RLQ6IPT4 315 aa26.25■■□□□ 1.79
AP000552.1-208ENST00000452952 NUP160Q12769 1436 aa26.23■■□□□ 1.79
AP000552.1-208ENST00000452952 ARAP1Q96P48 1450 aa26.23■■□□□ 1.79
AP000552.1-208ENST00000452952 IGF1RP08069 1367 aa26.18■■□□□ 1.78
AP000552.1-208ENST00000452952 CEP170Q5SW79 1584 aa26.15■■□□□ 1.78
AP000552.1-208ENST00000452952 CUL7Q14999 1698 aa26.03■■□□□ 1.76
AP000552.1-208ENST00000452952 CARMIL1Q5VZK9 1371 aa26.01■■□□□ 1.75
AP000552.1-208ENST00000452952 JPH4Q96JJ6 628 aa25.99■■□□□ 1.75
AP000552.1-208ENST00000452952 SHROOM2Q13796 1616 aa25.99■■□□□ 1.75
AP000552.1-208ENST00000452952 PRG4Q92954 1404 aaPredicted RBP25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms