RNA–Protein interactions for RNA: ENST00000543982.5

XRCC1-202, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2 BASIC

Gene XRCC1, Length 1,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-202ENST00000543982 NISCHQ9Y2I1 1504 aa37.07■■■■□ 3.53
XRCC1-202ENST00000543982 CCDC180Q9P1Z9 1646 aa32.34■■■□□ 2.77
XRCC1-202ENST00000543982 ABCC9O60706 1549 aa31.18■■■□□ 2.58
XRCC1-202ENST00000543982 ZCCHC6Q5VYS8 1495 aaKnown RBP31.05■■■□□ 2.56
XRCC1-202ENST00000543982 DCAF8L2P0C7V8 631 aa30.86■■■□□ 2.53
XRCC1-202ENST00000543982 DCAF1Q9Y4B6 1507 aa30.57■■■□□ 2.48
XRCC1-202ENST00000543982 MYO15BQ96JP2 1530 aa30.34■■■□□ 2.45
XRCC1-202ENST00000543982 NACADO15069 1562 aa30.29■■■□□ 2.44
XRCC1-202ENST00000543982 RB1CC1Q8TDY2 1594 aa30.12■■■□□ 2.41
XRCC1-202ENST00000543982 SHROOM4Q9ULL8 1493 aa30.11■■■□□ 2.41
XRCC1-202ENST00000543982 SCRIBQ14160 1630 aa29.84■■■□□ 2.37
XRCC1-202ENST00000543982 UNC13AQ9UPW8 1703 aa29.5■■■□□ 2.31
XRCC1-202ENST00000543982 PABPN1Q86U42 306 aaKnown RBP eCLIP29.43■■■□□ 2.3
XRCC1-202ENST00000543982 BICRAQ9NZM4 1560 aa29.35■■■□□ 2.29
XRCC1-202ENST00000543982 CECR2Q9BXF3 1484 aa28.96■■■□□ 2.23
XRCC1-202ENST00000543982 SUPT5HO00267 1087 aaKnown RBP28.75■■■□□ 2.19
XRCC1-202ENST00000543982 MROH2BQ7Z745 1585 aa28.7■■■□□ 2.18
XRCC1-202ENST00000543982 RSF1Q96T23 1441 aaPredicted RBP28.67■■■□□ 2.18
XRCC1-202ENST00000543982 BAZ1AQ9NRL2 1556 aaPredicted RBP28.58■■■□□ 2.17
XRCC1-202ENST00000543982 SMARCA4P51532 1647 aa28.54■■■□□ 2.16
XRCC1-202ENST00000543982 EIF4G1Q04637 1599 aaKnown RBP28.44■■■□□ 2.14
XRCC1-202ENST00000543982 WIZO95785 1651 aa28.38■■■□□ 2.13
XRCC1-202ENST00000543982 ATAD2BQ9ULI0 1458 aa28.25■■■□□ 2.11
XRCC1-202ENST00000543982 PEG3Q9GZU2 1588 aa28.18■■■□□ 2.1
XRCC1-202ENST00000543982 CC2D2AQ9P2K1 1620 aa28.13■■■□□ 2.09
XRCC1-202ENST00000543982 SMARCA2P51531 1590 aa28.1■■■□□ 2.09
XRCC1-202ENST00000543982 DNAJC5BQ9UF47 199 aa28.06■■■□□ 2.08
XRCC1-202ENST00000543982 NCAPD3P42695 1498 aa28.05■■■□□ 2.08
XRCC1-202ENST00000543982 TOP2AP11388 1531 aaKnown RBP28.02■■■□□ 2.08
XRCC1-202ENST00000543982 BAZ1BQ9UIG0 1483 aaKnown RBP28■■■□□ 2.07
XRCC1-202ENST00000543982 HMGXB3Q12766 1538 aa27.89■■■□□ 2.06
XRCC1-202ENST00000543982 CCDC88BA6NC98 1476 aa27.83■■■□□ 2.05
XRCC1-202ENST00000543982 CADPSQ9ULU8 1353 aa27.32■■□□□ 1.96
XRCC1-202ENST00000543982 CFTRP13569 1480 aa27.32■■□□□ 1.96
XRCC1-202ENST00000543982 CHIC1Q5VXU3 224 aa27.31■■□□□ 1.96
XRCC1-202ENST00000543982 NESP48681 1621 aa27.29■■□□□ 1.96
XRCC1-202ENST00000543982 ABCC8Q09428 1581 aa27.11■■□□□ 1.93
XRCC1-202ENST00000543982 LAMC3Q9Y6N6 1575 aa27.06■■□□□ 1.92
XRCC1-202ENST00000543982 FANCD2Q9BXW9 1451 aa27■■□□□ 1.91
XRCC1-202ENST00000543982 TRIM41Q8WV44 630 aa26.98■■□□□ 1.91
XRCC1-202ENST00000543982 WRNQ14191 1432 aaPredicted RBP eCLIP26.94■■□□□ 1.9
XRCC1-202ENST00000543982 PRDM2Q13029 1718 aa26.93■■□□□ 1.9
XRCC1-202ENST00000543982 PDS5BQ9NTI5 1447 aa26.91■■□□□ 1.9
XRCC1-202ENST00000543982 SYNJ1O43426 1573 aa26.86■■□□□ 1.89
XRCC1-202ENST00000543982 CUX1P39880 1505 aa26.84■■□□□ 1.89
XRCC1-202ENST00000543982 CEP164Q9UPV0 1460 aa26.82■■□□□ 1.88
XRCC1-202ENST00000543982 KIF21AQ7Z4S6 1674 aa26.8■■□□□ 1.88
XRCC1-202ENST00000543982 URB2Q14146 1524 aaKnown RBP26.73■■□□□ 1.87
XRCC1-202ENST00000543982 TOP2BQ02880 1626 aa26.71■■□□□ 1.87
XRCC1-202ENST00000543982 ERCC6Q03468 1493 aa26.68■■□□□ 1.86
XRCC1-202ENST00000543982 TOPBP1Q92547 1522 aa26.66■■□□□ 1.86
XRCC1-202ENST00000543982 BIVM-ERCC5R4GMW8 1640 aa26.66■■□□□ 1.86
XRCC1-202ENST00000543982 DNMBPQ6XZF7 1577 aa26.62■■□□□ 1.85
XRCC1-202ENST00000543982 MRC2Q9UBG0 1479 aa26.61■■□□□ 1.85
XRCC1-202ENST00000543982 FAM9AQ8IZU1 332 aaPredicted RBP26.58■■□□□ 1.85
XRCC1-202ENST00000543982 SOGA1O94964 1423 aa26.58■■□□□ 1.84
XRCC1-202ENST00000543982 FGD5Q6ZNL6 1462 aa26.57■■□□□ 1.84
XRCC1-202ENST00000543982 RUSC2Q8N2Y8 1516 aa26.53■■□□□ 1.84
XRCC1-202ENST00000543982 POLA1P09884 1462 aaPredicted RBP26.52■■□□□ 1.84
XRCC1-202ENST00000543982 RAD54L2Q9Y4B4 1467 aa26.5■■□□□ 1.83
XRCC1-202ENST00000543982 THOC2Q8NI27 1593 aaKnown RBP26.49■■□□□ 1.83
XRCC1-202ENST00000543982 WDR62O43379 1518 aa26.47■■□□□ 1.83
XRCC1-202ENST00000543982 CUX2O14529 1486 aa26.4■■□□□ 1.82
XRCC1-202ENST00000543982 LOC105371045A0A1W2PR82 267 aa26.33■■□□□ 1.81
XRCC1-202ENST00000543982 ABCA10Q8WWZ4 1543 aa26.31■■□□□ 1.8
XRCC1-202ENST00000543982 CSRNP3Q8WYN3 585 aa26.29■■□□□ 1.8
XRCC1-202ENST00000543982 TDRD9Q8NDG6 1382 aaKnown RBP26.29■■□□□ 1.8
XRCC1-202ENST00000543982 TARBP1Q13395 1621 aaKnown RBP26.28■■□□□ 1.8
XRCC1-202ENST00000543982 EHMT2Q96KQ7 1210 aa26.27■■□□□ 1.8
XRCC1-202ENST00000543982 KIF27Q86VH2 1401 aa26.26■■□□□ 1.79
XRCC1-202ENST00000543982 EEA1Q15075 1411 aa26.24■■□□□ 1.79
XRCC1-202ENST00000543982 ZNF608Q9ULD9 1512 aaPredicted RBP26.21■■□□□ 1.79
XRCC1-202ENST00000543982 IFT140Q96RY7 1462 aa26.21■■□□□ 1.79
XRCC1-202ENST00000543982 IGF1RP08069 1367 aa26.19■■□□□ 1.78
XRCC1-202ENST00000543982 WDR97A6NE52 1622 aa26.19■■□□□ 1.78
XRCC1-202ENST00000543982 AQRO60306 1485 aaKnown RBP eCLIP26.18■■□□□ 1.786e-6■■■■□ 25.1
XRCC1-202ENST00000543982 GAPVD1Q14C86 1478 aa26.1■■□□□ 1.77
XRCC1-202ENST00000543982 ABCA5Q8WWZ7 1642 aa26.09■■□□□ 1.77
XRCC1-202ENST00000543982 PRXQ9BXM0 1461 aa26.04■■□□□ 1.76
XRCC1-202ENST00000543982 RAPGEF2Q9Y4G8 1499 aa26.01■■□□□ 1.75
XRCC1-202ENST00000543982 CARMIL1Q5VZK9 1371 aa26■■□□□ 1.75
XRCC1-202ENST00000543982 EIF4G3O43432 1585 aaKnown RBP25.97■■□□□ 1.75
XRCC1-202ENST00000543982 GRIN2BQ13224 1484 aa25.94■■□□□ 1.74
XRCC1-202ENST00000543982 ERICH3Q5RHP9 1530 aa25.94■■□□□ 1.74
XRCC1-202ENST00000543982 KIF21BO75037 1637 aa25.93■■□□□ 1.74
XRCC1-202ENST00000543982 GOLGA3Q08378 1498 aa25.91■■□□□ 1.74
XRCC1-202ENST00000543982 UBTFP17480 764 aaKnown RBP25.9■■□□□ 1.74
XRCC1-202ENST00000543982 PBRM1Q86U86 1689 aa25.87■■□□□ 1.73
XRCC1-202ENST00000543982 SNAPC4Q5SXM2 1469 aa25.86■■□□□ 1.73
XRCC1-202ENST00000543982 FHAD1B1AJZ9 1412 aa25.81■■□□□ 1.72
XRCC1-202ENST00000543982 TNIKQ9UKE5 1360 aa25.8■■□□□ 1.72
XRCC1-202ENST00000543982 CUL7Q14999 1698 aa25.8■■□□□ 1.72
XRCC1-202ENST00000543982 ADAMTS12P58397 1594 aa25.78■■□□□ 1.72
XRCC1-202ENST00000543982 MAGI1Q96QZ7 1491 aaPredicted RBP25.73■■□□□ 1.71
XRCC1-202ENST00000543982 FBLN2P98095 1184 aa25.71■■□□□ 1.71
XRCC1-202ENST00000543982 RANGAP1P46060 587 aaPredicted RBP25.7■■□□□ 1.7
XRCC1-202ENST00000543982 CHMP7Q8WUX9 453 aaPredicted RBP25.68■■□□□ 1.7
XRCC1-202ENST00000543982 SYNJ2O15056 1496 aa25.66■■□□□ 1.7
XRCC1-202ENST00000543982 CEP162Q5TB80 1403 aa25.65■■□□□ 1.7
XRCC1-202ENST00000543982 GRIN2AQ12879 1464 aa25.64■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms