RNA–Protein interactions for RNA: ENST00000425254.2

LINC01534-201, Transcript of long intergenic non-protein coding RNA 1534, humanhuman

TSL 2 BASIC

Gene LINC01534, Length 815 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01534-201ENST00000425254 NISCHQ9Y2I1 1504 aa37.18■■■■□ 3.54
LINC01534-201ENST00000425254 CCDC180Q9P1Z9 1646 aa32.73■■■□□ 2.83
LINC01534-201ENST00000425254 ABCC9O60706 1549 aa31.74■■■□□ 2.67
LINC01534-201ENST00000425254 ZCCHC6Q5VYS8 1495 aaKnown RBP31.08■■■□□ 2.57
LINC01534-201ENST00000425254 DCAF8L2P0C7V8 631 aa30.91■■■□□ 2.54
LINC01534-201ENST00000425254 DCAF1Q9Y4B6 1507 aa30.74■■■□□ 2.51
LINC01534-201ENST00000425254 NACADO15069 1562 aa30.72■■■□□ 2.51
LINC01534-201ENST00000425254 MYO15BQ96JP2 1530 aa30.7■■■□□ 2.51
LINC01534-201ENST00000425254 RB1CC1Q8TDY2 1594 aa30.62■■■□□ 2.49
LINC01534-201ENST00000425254 SCRIBQ14160 1630 aa30■■■□□ 2.39
LINC01534-201ENST00000425254 UNC13AQ9UPW8 1703 aa29.91■■■□□ 2.38
LINC01534-201ENST00000425254 PABPN1Q86U42 306 aaKnown RBP eCLIP29.79■■■□□ 2.36
LINC01534-201ENST00000425254 BICRAQ9NZM4 1560 aa29.77■■■□□ 2.36
LINC01534-201ENST00000425254 SHROOM4Q9ULL8 1493 aa29.72■■■□□ 2.35
LINC01534-201ENST00000425254 CECR2Q9BXF3 1484 aa28.98■■■□□ 2.23
LINC01534-201ENST00000425254 EIF4G1Q04637 1599 aaKnown RBP28.92■■■□□ 2.22
LINC01534-201ENST00000425254 DNAJC5BQ9UF47 199 aa28.82■■■□□ 2.2
LINC01534-201ENST00000425254 BAZ1AQ9NRL2 1556 aaPredicted RBP28.74■■■□□ 2.19
LINC01534-201ENST00000425254 SMARCA4P51532 1647 aa28.72■■■□□ 2.19
LINC01534-201ENST00000425254 MROH2BQ7Z745 1585 aa28.71■■■□□ 2.19
LINC01534-201ENST00000425254 CC2D2AQ9P2K1 1620 aa28.68■■■□□ 2.18
LINC01534-201ENST00000425254 RSF1Q96T23 1441 aaPredicted RBP28.55■■■□□ 2.16
LINC01534-201ENST00000425254 ATAD2BQ9ULI0 1458 aa28.5■■■□□ 2.15
LINC01534-201ENST00000425254 PEG3Q9GZU2 1588 aa28.43■■■□□ 2.14
LINC01534-201ENST00000425254 SMARCA2P51531 1590 aa28.41■■■□□ 2.14
LINC01534-201ENST00000425254 NCAPD3P42695 1498 aa28.4■■■□□ 2.14
LINC01534-201ENST00000425254 WIZO95785 1651 aa28.37■■■□□ 2.13
LINC01534-201ENST00000425254 HMGXB3Q12766 1538 aa28.25■■■□□ 2.11
LINC01534-201ENST00000425254 BAZ1BQ9UIG0 1483 aaKnown RBP28.25■■■□□ 2.11
LINC01534-201ENST00000425254 SUPT5HO00267 1087 aaKnown RBP28.18■■■□□ 2.1
LINC01534-201ENST00000425254 TOP2AP11388 1531 aaKnown RBP28.08■■■□□ 2.09
LINC01534-201ENST00000425254 CCDC88BA6NC98 1476 aa27.81■■■□□ 2.04
LINC01534-201ENST00000425254 NESP48681 1621 aa27.62■■■□□ 2.01
LINC01534-201ENST00000425254 CADPSQ9ULU8 1353 aa27.6■■■□□ 2.01
LINC01534-201ENST00000425254 CFTRP13569 1480 aa27.53■■■□□ 2
LINC01534-201ENST00000425254 LAMC3Q9Y6N6 1575 aa27.51■■□□□ 1.99
LINC01534-201ENST00000425254 PDS5BQ9NTI5 1447 aa27.34■■□□□ 1.97
LINC01534-201ENST00000425254 FANCD2Q9BXW9 1451 aa27.27■■□□□ 1.96
LINC01534-201ENST00000425254 AEBP2Q6ZN18 517 aaPredicted RBP27.26■■□□□ 1.95
LINC01534-201ENST00000425254 ERCC6Q03468 1493 aa27.25■■□□□ 1.95
LINC01534-201ENST00000425254 KIF21AQ7Z4S6 1674 aa27.19■■□□□ 1.94
LINC01534-201ENST00000425254 PRDM2Q13029 1718 aa27.19■■□□□ 1.94
LINC01534-201ENST00000425254 CEP164Q9UPV0 1460 aa27.17■■□□□ 1.94
LINC01534-201ENST00000425254 MRC2Q9UBG0 1479 aa27.05■■□□□ 1.92
LINC01534-201ENST00000425254 THOC2Q8NI27 1593 aaKnown RBP27.03■■□□□ 1.92
LINC01534-201ENST00000425254 URB2Q14146 1524 aaKnown RBP27■■□□□ 1.91
LINC01534-201ENST00000425254 WDR62O43379 1518 aa26.94■■□□□ 1.9
LINC01534-201ENST00000425254 ABCC8Q09428 1581 aa26.92■■□□□ 1.9
LINC01534-201ENST00000425254 TOPBP1Q92547 1522 aa26.9■■□□□ 1.9
LINC01534-201ENST00000425254 CUX1P39880 1505 aa26.88■■□□□ 1.89
LINC01534-201ENST00000425254 DNMBPQ6XZF7 1577 aa26.87■■□□□ 1.89
LINC01534-201ENST00000425254 WRNQ14191 1432 aaPredicted RBP eCLIP26.86■■□□□ 1.89
LINC01534-201ENST00000425254 CUX2O14529 1486 aa26.79■■□□□ 1.88
LINC01534-201ENST00000425254 SYNJ1O43426 1573 aa26.78■■□□□ 1.88
LINC01534-201ENST00000425254 TOP2BQ02880 1626 aa26.72■■□□□ 1.87
LINC01534-201ENST00000425254 POLA1P09884 1462 aaPredicted RBP26.71■■□□□ 1.87
LINC01534-201ENST00000425254 FGD5Q6ZNL6 1462 aa26.71■■□□□ 1.87
LINC01534-201ENST00000425254 BIVM-ERCC5R4GMW8 1640 aa26.68■■□□□ 1.86
LINC01534-201ENST00000425254 RAD54L2Q9Y4B4 1467 aa26.62■■□□□ 1.85
LINC01534-201ENST00000425254 SOGA1O94964 1423 aa26.61■■□□□ 1.85
LINC01534-201ENST00000425254 CHIC1Q5VXU3 224 aa26.59■■□□□ 1.85
LINC01534-201ENST00000425254 IFT140Q96RY7 1462 aa26.59■■□□□ 1.85
LINC01534-201ENST00000425254 TARBP1Q13395 1621 aaKnown RBP26.55■■□□□ 1.84
LINC01534-201ENST00000425254 TRIM41Q8WV44 630 aa26.55■■□□□ 1.84
LINC01534-201ENST00000425254 ZNF608Q9ULD9 1512 aaPredicted RBP26.49■■□□□ 1.83
LINC01534-201ENST00000425254 ABCA10Q8WWZ4 1543 aa26.45■■□□□ 1.83
LINC01534-201ENST00000425254 TDRD9Q8NDG6 1382 aaKnown RBP26.44■■□□□ 1.82
LINC01534-201ENST00000425254 AQRO60306 1485 aaKnown RBP eCLIP26.41■■□□□ 1.822e-7■■■■□ 22
LINC01534-201ENST00000425254 WDR97A6NE52 1622 aa26.39■■□□□ 1.82
LINC01534-201ENST00000425254 EIF4G3O43432 1585 aaKnown RBP26.33■■□□□ 1.8
LINC01534-201ENST00000425254 GAPVD1Q14C86 1478 aa26.29■■□□□ 1.8
LINC01534-201ENST00000425254 ABCA5Q8WWZ7 1642 aa26.28■■□□□ 1.8
LINC01534-201ENST00000425254 RUSC2Q8N2Y8 1516 aa26.25■■□□□ 1.79
LINC01534-201ENST00000425254 KIF27Q86VH2 1401 aa26.24■■□□□ 1.79
LINC01534-201ENST00000425254 GRIN2BQ13224 1484 aa26.22■■□□□ 1.79
LINC01534-201ENST00000425254 IGF1RP08069 1367 aa26.15■■□□□ 1.78
LINC01534-201ENST00000425254 SNAPC4Q5SXM2 1469 aa26.14■■□□□ 1.78
LINC01534-201ENST00000425254 PBRM1Q86U86 1689 aa26.12■■□□□ 1.77
LINC01534-201ENST00000425254 ERICH3Q5RHP9 1530 aa26.11■■□□□ 1.77
LINC01534-201ENST00000425254 MAGI1Q96QZ7 1491 aaPredicted RBP26.08■■□□□ 1.77
LINC01534-201ENST00000425254 FAM9AQ8IZU1 332 aaPredicted RBP26.05■■□□□ 1.76
LINC01534-201ENST00000425254 EEA1Q15075 1411 aa26.02■■□□□ 1.76
LINC01534-201ENST00000425254 ADAMTS12P58397 1594 aa26■■□□□ 1.75
LINC01534-201ENST00000425254 FHAD1B1AJZ9 1412 aa26■■□□□ 1.75
LINC01534-201ENST00000425254 CSRNP3Q8WYN3 585 aa25.99■■□□□ 1.75
LINC01534-201ENST00000425254 SYNJ2O15056 1496 aa25.98■■□□□ 1.75
LINC01534-201ENST00000425254 CARMIL1Q5VZK9 1371 aa25.97■■□□□ 1.75
LINC01534-201ENST00000425254 FBLN2P98095 1184 aa25.97■■□□□ 1.75
LINC01534-201ENST00000425254 CHMP7Q8WUX9 453 aaPredicted RBP25.95■■□□□ 1.74
LINC01534-201ENST00000425254 CUL7Q14999 1698 aa25.92■■□□□ 1.74
LINC01534-201ENST00000425254 PRXQ9BXM0 1461 aa25.91■■□□□ 1.74
LINC01534-201ENST00000425254 GRIN2AQ12879 1464 aa25.89■■□□□ 1.73
LINC01534-201ENST00000425254 CHD1O14646 1710 aa25.87■■□□□ 1.73
LINC01534-201ENST00000425254 RAPGEF2Q9Y4G8 1499 aa25.84■■□□□ 1.73
LINC01534-201ENST00000425254 OSCARQ8IYS5 282 aa25.81■■□□□ 1.72
LINC01534-201ENST00000425254 NUP160Q12769 1436 aa25.77■■□□□ 1.72
LINC01534-201ENST00000425254 CEP170Q5SW79 1584 aa25.75■■□□□ 1.71
LINC01534-201ENST00000425254 KIF21BO75037 1637 aa25.71■■□□□ 1.71
LINC01534-201ENST00000425254 EHMT2Q96KQ7 1210 aa25.69■■□□□ 1.7
LINC01534-201ENST00000425254 CLASP1Q7Z460 1538 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms