RNA–Protein interactions for RNA: ENST00000334478.8

PFDN5-202, Transcript of prefoldin subunit 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN5, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-202ENST00000334478 NISCHQ9Y2I1 1504 aa37■■■■□ 3.51
PFDN5-202ENST00000334478 CCDC180Q9P1Z9 1646 aa33.11■■■□□ 2.89
PFDN5-202ENST00000334478 ABCC9O60706 1549 aa32.38■■■□□ 2.77
PFDN5-202ENST00000334478 RB1CC1Q8TDY2 1594 aa31.18■■■□□ 2.58
PFDN5-202ENST00000334478 NACADO15069 1562 aa31.09■■■□□ 2.57
PFDN5-202ENST00000334478 MYO15BQ96JP2 1530 aa30.88■■■□□ 2.53
PFDN5-202ENST00000334478 ZCCHC6Q5VYS8 1495 aaKnown RBP30.82■■■□□ 2.53
PFDN5-202ENST00000334478 DCAF8L2P0C7V8 631 aa30.81■■■□□ 2.52
PFDN5-202ENST00000334478 DCAF1Q9Y4B6 1507 aa30.68■■■□□ 2.5
PFDN5-202ENST00000334478 UNC13AQ9UPW8 1703 aa30.53■■■□□ 2.48
PFDN5-202ENST00000334478 BICRAQ9NZM4 1560 aa30.21■■■□□ 2.43
PFDN5-202ENST00000334478 PABPN1Q86U42 306 aaKnown RBP eCLIP30.13■■■□□ 2.41
PFDN5-202ENST00000334478 SCRIBQ14160 1630 aa30.1■■■□□ 2.41
PFDN5-202ENST00000334478 SHROOM4Q9ULL8 1493 aa29.97■■■□□ 2.39
PFDN5-202ENST00000334478 DNAJC5BQ9UF47 199 aa29.76■■■□□ 2.35
PFDN5-202ENST00000334478 EIF4G1Q04637 1599 aaKnown RBP29.44■■■□□ 2.3
PFDN5-202ENST00000334478 CC2D2AQ9P2K1 1620 aa29.35■■■□□ 2.29
PFDN5-202ENST00000334478 CECR2Q9BXF3 1484 aa29.14■■■□□ 2.26
PFDN5-202ENST00000334478 SMARCA4P51532 1647 aa28.8■■■□□ 2.2
PFDN5-202ENST00000334478 BAZ1AQ9NRL2 1556 aaPredicted RBP28.74■■■□□ 2.19
PFDN5-202ENST00000334478 SMARCA2P51531 1590 aa28.65■■■□□ 2.18
PFDN5-202ENST00000334478 NCAPD3P42695 1498 aa28.64■■■□□ 2.17
PFDN5-202ENST00000334478 ATAD2BQ9ULI0 1458 aa28.62■■■□□ 2.17
PFDN5-202ENST00000334478 HMGXB3Q12766 1538 aa28.56■■■□□ 2.16
PFDN5-202ENST00000334478 PEG3Q9GZU2 1588 aa28.54■■■□□ 2.16
PFDN5-202ENST00000334478 MROH2BQ7Z745 1585 aa28.49■■■□□ 2.15
PFDN5-202ENST00000334478 BAZ1BQ9UIG0 1483 aaKnown RBP28.4■■■□□ 2.14
PFDN5-202ENST00000334478 WIZO95785 1651 aa28.21■■■□□ 2.11
PFDN5-202ENST00000334478 RSF1Q96T23 1441 aaPredicted RBP28.09■■■□□ 2.09
PFDN5-202ENST00000334478 LAMC3Q9Y6N6 1575 aa27.99■■■□□ 2.07
PFDN5-202ENST00000334478 NESP48681 1621 aa27.96■■■□□ 2.07
PFDN5-202ENST00000334478 ERCC6Q03468 1493 aa27.96■■■□□ 2.07
PFDN5-202ENST00000334478 TOP2AP11388 1531 aaKnown RBP27.92■■■□□ 2.06
PFDN5-202ENST00000334478 CUX2O14529 1486 aa27.77■■■□□ 2.04
PFDN5-202ENST00000334478 CADPSQ9ULU8 1353 aa27.76■■■□□ 2.03
PFDN5-202ENST00000334478 KIF21AQ7Z4S6 1674 aa27.75■■■□□ 2.03
PFDN5-202ENST00000334478 PDS5BQ9NTI5 1447 aa27.73■■■□□ 2.03
PFDN5-202ENST00000334478 THOC2Q8NI27 1593 aaKnown RBP27.69■■■□□ 2.02
PFDN5-202ENST00000334478 CFTRP13569 1480 aa27.6■■■□□ 2.01
PFDN5-202ENST00000334478 PRDM2Q13029 1718 aa27.55■■■□□ 2
PFDN5-202ENST00000334478 CCDC88BA6NC98 1476 aa27.52■■■□□ 2
PFDN5-202ENST00000334478 CEP164Q9UPV0 1460 aa27.49■■□□□ 1.99
PFDN5-202ENST00000334478 FANCD2Q9BXW9 1451 aa27.48■■□□□ 1.99
PFDN5-202ENST00000334478 MRC2Q9UBG0 1479 aa27.48■■□□□ 1.99
PFDN5-202ENST00000334478 WDR62O43379 1518 aa27.42■■□□□ 1.98
PFDN5-202ENST00000334478 URB2Q14146 1524 aaKnown RBP27.21■■□□□ 1.95
PFDN5-202ENST00000334478 SUPT5HO00267 1087 aaKnown RBP27.13■■□□□ 1.93
PFDN5-202ENST00000334478 ABCC8Q09428 1581 aa27.05■■□□□ 1.92
PFDN5-202ENST00000334478 DNMBPQ6XZF7 1577 aa27.03■■□□□ 1.92
PFDN5-202ENST00000334478 TOPBP1Q92547 1522 aa27.03■■□□□ 1.92
PFDN5-202ENST00000334478 DNAJC5Q9H3Z4 198 aa27■■□□□ 1.91
PFDN5-202ENST00000334478 IFT140Q96RY7 1462 aa26.91■■□□□ 1.9
PFDN5-202ENST00000334478 TARBP1Q13395 1621 aaKnown RBP26.79■■□□□ 1.88
PFDN5-202ENST00000334478 POLA1P09884 1462 aaPredicted RBP26.78■■□□□ 1.88
PFDN5-202ENST00000334478 CUX1P39880 1505 aa26.75■■□□□ 1.87
PFDN5-202ENST00000334478 ZNF608Q9ULD9 1512 aaPredicted RBP26.75■■□□□ 1.87
PFDN5-202ENST00000334478 EIF4G3O43432 1585 aaKnown RBP26.75■■□□□ 1.87
PFDN5-202ENST00000334478 FGD5Q6ZNL6 1462 aa26.69■■□□□ 1.86
PFDN5-202ENST00000334478 WDR97A6NE52 1622 aa26.65■■□□□ 1.86
PFDN5-202ENST00000334478 SOGA1O94964 1423 aa26.62■■□□□ 1.85
PFDN5-202ENST00000334478 RAD54L2Q9Y4B4 1467 aa26.62■■□□□ 1.85
PFDN5-202ENST00000334478 BIVM-ERCC5R4GMW8 1640 aa26.57■■□□□ 1.84
PFDN5-202ENST00000334478 AQRO60306 1485 aaKnown RBP eCLIP26.55■■□□□ 1.846e-7■■■■■ 32.7
PFDN5-202ENST00000334478 TOP2BQ02880 1626 aa26.54■■□□□ 1.84
PFDN5-202ENST00000334478 WRNQ14191 1432 aaPredicted RBP eCLIP26.5■■□□□ 1.833e-8■□□□□ 9.6
PFDN5-202ENST00000334478 SYNJ1O43426 1573 aa26.49■■□□□ 1.83
PFDN5-202ENST00000334478 OSCARQ8IYS5 282 aa26.48■■□□□ 1.83
PFDN5-202ENST00000334478 CHD1O14646 1710 aa26.46■■□□□ 1.83
PFDN5-202ENST00000334478 TDRD9Q8NDG6 1382 aaKnown RBP26.46■■□□□ 1.83
PFDN5-202ENST00000334478 ABCA10Q8WWZ4 1543 aa26.44■■□□□ 1.82
PFDN5-202ENST00000334478 PBRM1Q86U86 1689 aa26.42■■□□□ 1.82
PFDN5-202ENST00000334478 ABCA5Q8WWZ7 1642 aa26.4■■□□□ 1.82
PFDN5-202ENST00000334478 GRIN2BQ13224 1484 aa26.38■■□□□ 1.81
PFDN5-202ENST00000334478 SNAPC4Q5SXM2 1469 aa26.36■■□□□ 1.81
PFDN5-202ENST00000334478 MAGI1Q96QZ7 1491 aaPredicted RBP26.36■■□□□ 1.81
PFDN5-202ENST00000334478 GAPVD1Q14C86 1478 aa26.36■■□□□ 1.81
PFDN5-202ENST00000334478 SYNJ2O15056 1496 aa26.24■■□□□ 1.79
PFDN5-202ENST00000334478 FBLN2P98095 1184 aa26.22■■□□□ 1.79
PFDN5-202ENST00000334478 RIMBP3CA6NJZ7 1639 aa26.18■■□□□ 1.78
PFDN5-202ENST00000334478 RIMBP3BA6NNM3 1639 aa26.18■■□□□ 1.78
PFDN5-202ENST00000334478 RIMBP3Q9UFD9 1639 aa26.18■■□□□ 1.78
PFDN5-202ENST00000334478 ERICH3Q5RHP9 1530 aa26.16■■□□□ 1.78
PFDN5-202ENST00000334478 CHMP7Q8WUX9 453 aaPredicted RBP26.16■■□□□ 1.78
PFDN5-202ENST00000334478 ADAMTS12P58397 1594 aa26.16■■□□□ 1.78
PFDN5-202ENST00000334478 ARHGEF11O15085 1522 aa26.14■■□□□ 1.77
PFDN5-202ENST00000334478 CLASP1Q7Z460 1538 aa26.14■■□□□ 1.77
PFDN5-202ENST00000334478 GRIN2AQ12879 1464 aa26.05■■□□□ 1.76
PFDN5-202ENST00000334478 FHAD1B1AJZ9 1412 aa26.05■■□□□ 1.76
PFDN5-202ENST00000334478 TRIM41Q8WV44 630 aa26■■□□□ 1.75
PFDN5-202ENST00000334478 KIF27Q86VH2 1401 aa25.97■■□□□ 1.75
PFDN5-202ENST00000334478 NUP160Q12769 1436 aa25.94■■□□□ 1.74
PFDN5-202ENST00000334478 CEP170Q5SW79 1584 aa25.94■■□□□ 1.74
PFDN5-202ENST00000334478 CUL7Q14999 1698 aa25.93■■□□□ 1.74
PFDN5-202ENST00000334478 ARAP1Q96P48 1450 aa25.9■■□□□ 1.74
PFDN5-202ENST00000334478 SHROOM2Q13796 1616 aa25.83■■□□□ 1.73
PFDN5-202ENST00000334478 IGF1RP08069 1367 aa25.82■■□□□ 1.72
PFDN5-202ENST00000334478 RUSC2Q8N2Y8 1516 aa25.79■■□□□ 1.72
PFDN5-202ENST00000334478 CYB5RLQ6IPT4 315 aa25.77■■□□□ 1.72
PFDN5-202ENST00000334478 ERCC6L2Q5T890 1561 aa25.69■■□□□ 1.7
PFDN5-202ENST00000334478 CARMIL1Q5VZK9 1371 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms