RNA–Protein interactions for RNA: ENST00000260270.2

FDX1-201, Transcript of ferredoxin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FDX1, Length 3,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDX1-201ENST00000260270 NISCHQ9Y2I1 1504 aa35.51■■■■□ 3.28
FDX1-201ENST00000260270 CCDC180Q9P1Z9 1646 aa30.9■■■□□ 2.54
FDX1-201ENST00000260270 ZCCHC6Q5VYS8 1495 aaKnown RBP30.19■■■□□ 2.42
FDX1-201ENST00000260270 DCAF1Q9Y4B6 1507 aa29.78■■■□□ 2.36
FDX1-201ENST00000260270 MYO15BQ96JP2 1530 aa29.09■■■□□ 2.25
FDX1-201ENST00000260270 SHROOM4Q9ULL8 1493 aa28.71■■■□□ 2.19
FDX1-201ENST00000260270 ABCC9O60706 1549 aa28.54■■■□□ 2.16
FDX1-201ENST00000260270 NACADO15069 1562 aa28.24■■■□□ 2.11
FDX1-201ENST00000260270 SUPT5HO00267 1087 aaKnown RBP27.99■■■□□ 2.07
FDX1-201ENST00000260270 SCRIBQ14160 1630 aa27.92■■■□□ 2.06
FDX1-201ENST00000260270 CHIC1Q5VXU3 224 aa27.88■■■□□ 2.05
FDX1-201ENST00000260270 RB1CC1Q8TDY2 1594 aa27.8■■■□□ 2.04
FDX1-201ENST00000260270 RSF1Q96T23 1441 aaPredicted RBP27.8■■■□□ 2.04
FDX1-201ENST00000260270 EIF4G1Q04637 1599 aaKnown RBP27.53■■■□□ 2
FDX1-201ENST00000260270 DCAF8L2P0C7V8 631 aa27.51■■□□□ 1.99
FDX1-201ENST00000260270 UNC13AQ9UPW8 1703 aa27.49■■□□□ 1.99
FDX1-201ENST00000260270 BAZ1AQ9NRL2 1556 aaPredicted RBP27.48■■□□□ 1.99
FDX1-201ENST00000260270 MROH2BQ7Z745 1585 aa27.36■■□□□ 1.97
FDX1-201ENST00000260270 CECR2Q9BXF3 1484 aa27.26■■□□□ 1.95
FDX1-201ENST00000260270 WIZO95785 1651 aa27.24■■□□□ 1.95
FDX1-201ENST00000260270 SMARCA4P51532 1647 aa27.15■■□□□ 1.94
FDX1-201ENST00000260270 TOP2AP11388 1531 aaKnown RBP27.12■■□□□ 1.93
FDX1-201ENST00000260270 PEG3Q9GZU2 1588 aa27.11■■□□□ 1.93
FDX1-201ENST00000260270 BICRAQ9NZM4 1560 aa26.99■■□□□ 1.91
FDX1-201ENST00000260270 SMARCA2P51531 1590 aa26.9■■□□□ 1.9
FDX1-201ENST00000260270 HRCP23327 699 aa26.8■■□□□ 1.88
FDX1-201ENST00000260270 CCDC88BA6NC98 1476 aa26.62■■□□□ 1.85
FDX1-201ENST00000260270 LOC105371045A0A1W2PR82 267 aa26.51■■□□□ 1.83
FDX1-201ENST00000260270 TRIM41Q8WV44 630 aa26.45■■□□□ 1.83
FDX1-201ENST00000260270 TRIM26Q12899 539 aaPredicted RBP26.38■■□□□ 1.81
FDX1-201ENST00000260270 EEA1Q15075 1411 aa26.38■■□□□ 1.81
FDX1-201ENST00000260270 WRNQ14191 1432 aaPredicted RBP eCLIP26.34■■□□□ 1.81
FDX1-201ENST00000260270 PPARGC1BQ86YN6 1023 aaKnown RBP26.34■■□□□ 1.81
FDX1-201ENST00000260270 ABCC8Q09428 1581 aa26.3■■□□□ 1.8
FDX1-201ENST00000260270 PCGF6Q9BYE7 350 aa26.27■■□□□ 1.8
FDX1-201ENST00000260270 ATAD2BQ9ULI0 1458 aa26.26■■□□□ 1.79
FDX1-201ENST00000260270 KIF21BO75037 1637 aa26.21■■□□□ 1.79
FDX1-201ENST00000260270 HMGXB3Q12766 1538 aa26.21■■□□□ 1.79
FDX1-201ENST00000260270 BIVM-ERCC5R4GMW8 1640 aa26.17■■□□□ 1.78
FDX1-201ENST00000260270 PRDM2Q13029 1718 aa26.12■■□□□ 1.77
FDX1-201ENST00000260270 SYNJ1O43426 1573 aa26.11■■□□□ 1.77
FDX1-201ENST00000260270 TOP2BQ02880 1626 aa26.05■■□□□ 1.76
FDX1-201ENST00000260270 TNIKQ9UKE5 1360 aa26.05■■□□□ 1.76
FDX1-201ENST00000260270 BAZ1BQ9UIG0 1483 aaKnown RBP26■■□□□ 1.75
FDX1-201ENST00000260270 NCAPD3P42695 1498 aa25.96■■□□□ 1.75
FDX1-201ENST00000260270 SOGA1O94964 1423 aa25.93■■□□□ 1.74
FDX1-201ENST00000260270 GOLGA3Q08378 1498 aa25.91■■□□□ 1.74
FDX1-201ENST00000260270 ZEB1P37275 1124 aaPredicted RBP25.9■■□□□ 1.74
FDX1-201ENST00000260270 CEP162Q5TB80 1403 aa25.87■■□□□ 1.73
FDX1-201ENST00000260270 CEP164Q9UPV0 1460 aa25.83■■□□□ 1.72
FDX1-201ENST00000260270 ERICH3Q5RHP9 1530 aa25.81■■□□□ 1.72
FDX1-201ENST00000260270 RUSC2Q8N2Y8 1516 aa25.81■■□□□ 1.72
FDX1-201ENST00000260270 CFTRP13569 1480 aa25.66■■□□□ 1.7
FDX1-201ENST00000260270 CSRNP3Q8WYN3 585 aa25.64■■□□□ 1.69
FDX1-201ENST00000260270 FAM9AQ8IZU1 332 aaPredicted RBP25.62■■□□□ 1.69
FDX1-201ENST00000260270 PABPN1Q86U42 306 aaKnown RBP eCLIP25.61■■□□□ 1.69
FDX1-201ENST00000260270 PRXQ9BXM0 1461 aa25.6■■□□□ 1.69
FDX1-201ENST00000260270 CUX1P39880 1505 aa25.57■■□□□ 1.68
FDX1-201ENST00000260270 PELP1Q8IZL8 1130 aaKnown RBP25.56■■□□□ 1.68
FDX1-201ENST00000260270 VPS8Q8N3P4 1428 aa25.47■■□□□ 1.67
FDX1-201ENST00000260270 RAPGEF2Q9Y4G8 1499 aa25.44■■□□□ 1.66
FDX1-201ENST00000260270 CLIP1P30622 1438 aa25.34■■□□□ 1.65
FDX1-201ENST00000260270 ARAP1Q96P48 1450 aa25.29■■□□□ 1.64
FDX1-201ENST00000260270 SCAF1Q9H7N4 1312 aaKnown RBP25.26■■□□□ 1.63
FDX1-201ENST00000260270 MAP3K1Q13233 1512 aa25.26■■□□□ 1.63
FDX1-201ENST00000260270 WDR97A6NE52 1622 aa25.21■■□□□ 1.63
FDX1-201ENST00000260270 CUX2O14529 1486 aa25.19■■□□□ 1.62
FDX1-201ENST00000260270 KIF27Q86VH2 1401 aa25.18■■□□□ 1.62
FDX1-201ENST00000260270 CC2D2AQ9P2K1 1620 aa25.16■■□□□ 1.62
FDX1-201ENST00000260270 CADPSQ9ULU8 1353 aa25.1■■□□□ 1.61
FDX1-201ENST00000260270 DNMBPQ6XZF7 1577 aa25.09■■□□□ 1.61
FDX1-201ENST00000260270 CFAP43Q8NDM7 1665 aa25.07■■□□□ 1.6
FDX1-201ENST00000260270 RRBP1Q9P2E9 1410 aaKnown RBP25.06■■□□□ 1.6
FDX1-201ENST00000260270 CUL7Q14999 1698 aa25.04■■□□□ 1.6
FDX1-201ENST00000260270 ARHGAP35Q9NRY4 1499 aa25.03■■□□□ 1.6
FDX1-201ENST00000260270 ABCA10Q8WWZ4 1543 aa24.99■■□□□ 1.59
FDX1-201ENST00000260270 UBTFP17480 764 aaKnown RBP24.97■■□□□ 1.59
FDX1-201ENST00000260270 LAMC3Q9Y6N6 1575 aa24.97■■□□□ 1.59
FDX1-201ENST00000260270 CTTNBP2Q8WZ74 1663 aa24.96■■□□□ 1.59
FDX1-201ENST00000260270 FGD5Q6ZNL6 1462 aa24.95■■□□□ 1.59
FDX1-201ENST00000260270 TIAM1Q13009 1591 aa24.92■■□□□ 1.58
FDX1-201ENST00000260270 IGF1RP08069 1367 aa24.91■■□□□ 1.58
FDX1-201ENST00000260270 CLSPNQ9HAW4 1339 aa24.9■■□□□ 1.58
FDX1-201ENST00000260270 ABCA5Q8WWZ7 1642 aa24.89■■□□□ 1.58
FDX1-201ENST00000260270 EFCAB5A4FU69 1503 aa24.89■■□□□ 1.57
FDX1-201ENST00000260270 EHMT2Q96KQ7 1210 aa24.88■■□□□ 1.57
FDX1-201ENST00000260270 AQRO60306 1485 aaKnown RBP eCLIP24.85■■□□□ 1.57
FDX1-201ENST00000260270 FANCD2Q9BXW9 1451 aa24.84■■□□□ 1.57
FDX1-201ENST00000260270 KIF21AQ7Z4S6 1674 aa24.84■■□□□ 1.57
FDX1-201ENST00000260270 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.82■■□□□ 1.56
FDX1-201ENST00000260270 TOPBP1Q92547 1522 aa24.82■■□□□ 1.56
FDX1-201ENST00000260270 SAMD9Q5K651 1589 aa24.78■■□□□ 1.56
FDX1-201ENST00000260270 CCER1Q8TC90 406 aaPredicted RBP24.77■■□□□ 1.56
FDX1-201ENST00000260270 POLA1P09884 1462 aaPredicted RBP24.75■■□□□ 1.55
FDX1-201ENST00000260270 THOC2Q8NI27 1593 aaKnown RBP24.72■■□□□ 1.55
FDX1-201ENST00000260270 PCF11O94913 1555 aaKnown RBP24.7■■□□□ 1.54
FDX1-201ENST00000260270 FYCO1Q9BQS8 1478 aa24.68■■□□□ 1.54
FDX1-201ENST00000260270 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.66■■□□□ 1.54
FDX1-201ENST00000260270 CARMIL1Q5VZK9 1371 aa24.65■■□□□ 1.54
FDX1-201ENST00000260270 TARBP1Q13395 1621 aaKnown RBP24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms