RNA–Protein interactions for RNA: ENST00000569477.5

PML-220, Transcript of promyelocytic leukemia, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PML, Length 2,251 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PML-220ENST00000569477 NISCHQ9Y2I1 1504 aa36.02■■■■□ 3.36
PML-220ENST00000569477 SHROOM4Q9ULL8 1493 aa30.87■■■□□ 2.53
PML-220ENST00000569477 CCDC180Q9P1Z9 1646 aa30.5■■■□□ 2.47
PML-220ENST00000569477 ZCCHC6Q5VYS8 1495 aaKnown RBP30.49■■■□□ 2.47
PML-220ENST00000569477 SUPT5HO00267 1087 aaKnown RBP30.34■■■□□ 2.45
PML-220ENST00000569477 DCAF8L2P0C7V8 631 aa29.88■■■□□ 2.37
PML-220ENST00000569477 CHIC1Q5VXU3 224 aa29.56■■■□□ 2.32
PML-220ENST00000569477 DCAF1Q9Y4B6 1507 aa29.51■■■□□ 2.31
PML-220ENST00000569477 MYO15BQ96JP2 1530 aa29.5■■■□□ 2.31
PML-220ENST00000569477 HRCP23327 699 aa28.87■■■□□ 2.21
PML-220ENST00000569477 PCGF6Q9BYE7 350 aa28.78■■■□□ 2.2
PML-220ENST00000569477 ABCC9O60706 1549 aa28.78■■■□□ 2.2
PML-220ENST00000569477 LOC105371045A0A1W2PR82 267 aa28.73■■■□□ 2.19
PML-220ENST00000569477 SCRIBQ14160 1630 aa28.67■■■□□ 2.18
PML-220ENST00000569477 RSF1Q96T23 1441 aaPredicted RBP28.58■■■□□ 2.17
PML-220ENST00000569477 PPARGC1BQ86YN6 1023 aaKnown RBP28.3■■■□□ 2.12
PML-220ENST00000569477 RB1CC1Q8TDY2 1594 aa28.3■■■□□ 2.12
PML-220ENST00000569477 TRIM41Q8WV44 630 aa28.22■■■□□ 2.11
PML-220ENST00000569477 TRIM26Q12899 539 aaPredicted RBP28.18■■■□□ 2.1
PML-220ENST00000569477 NACADO15069 1562 aa28.18■■■□□ 2.1
PML-220ENST00000569477 CECR2Q9BXF3 1484 aa28.14■■■□□ 2.09
PML-220ENST00000569477 MROH2BQ7Z745 1585 aa28.04■■■□□ 2.08
PML-220ENST00000569477 FAM9AQ8IZU1 332 aaPredicted RBP28.03■■■□□ 2.08
PML-220ENST00000569477 WIZO95785 1651 aa27.9■■■□□ 2.06
PML-220ENST00000569477 EHMT2Q96KQ7 1210 aa27.81■■■□□ 2.04
PML-220ENST00000569477 BAZ1AQ9NRL2 1556 aaPredicted RBP27.69■■■□□ 2.02
PML-220ENST00000569477 ZEB1P37275 1124 aaPredicted RBP27.58■■■□□ 2.01
PML-220ENST00000569477 EIF4G1Q04637 1599 aaKnown RBP27.56■■■□□ 2
PML-220ENST00000569477 TOP2AP11388 1531 aaKnown RBP27.42■■□□□ 1.98
PML-220ENST00000569477 SMARCA4P51532 1647 aa27.4■■□□□ 1.98
PML-220ENST00000569477 CCDC88BA6NC98 1476 aa27.35■■□□□ 1.97
PML-220ENST00000569477 UNC13AQ9UPW8 1703 aa27.34■■□□□ 1.97
PML-220ENST00000569477 ABCC8Q09428 1581 aa27.33■■□□□ 1.97
PML-220ENST00000569477 SMARCA2P51531 1590 aa27.29■■□□□ 1.96
PML-220ENST00000569477 SOGA1O94964 1423 aa27.11■■□□□ 1.93
PML-220ENST00000569477 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.07■■□□□ 1.92
PML-220ENST00000569477 PABPN1Q86U42 306 aaKnown RBP eCLIP27.05■■□□□ 1.92
PML-220ENST00000569477 CEP162Q5TB80 1403 aa27.02■■□□□ 1.92
PML-220ENST00000569477 WRNQ14191 1432 aaPredicted RBP eCLIP27.01■■□□□ 1.91
PML-220ENST00000569477 BICRAQ9NZM4 1560 aa26.99■■□□□ 1.91
PML-220ENST00000569477 RUSC2Q8N2Y8 1516 aa26.99■■□□□ 1.91
PML-220ENST00000569477 TNIKQ9UKE5 1360 aa26.97■■□□□ 1.91
PML-220ENST00000569477 CCER1Q8TC90 406 aaPredicted RBP26.96■■□□□ 1.91
PML-220ENST00000569477 CSRNP3Q8WYN3 585 aa26.95■■□□□ 1.91
PML-220ENST00000569477 TTBK1Q5TCY1 1321 aaPredicted RBP26.95■■□□□ 1.9
PML-220ENST00000569477 EEA1Q15075 1411 aa26.92■■□□□ 1.9
PML-220ENST00000569477 UBTFP17480 764 aaKnown RBP26.86■■□□□ 1.89
PML-220ENST00000569477 PEG3Q9GZU2 1588 aa26.84■■□□□ 1.89
PML-220ENST00000569477 GOLGA3Q08378 1498 aa26.77■■□□□ 1.88
PML-220ENST00000569477 SYNJ1O43426 1573 aa26.7■■□□□ 1.87
PML-220ENST00000569477 SCAF1Q9H7N4 1312 aaKnown RBP26.7■■□□□ 1.86
PML-220ENST00000569477 ATAD2BQ9ULI0 1458 aa26.67■■□□□ 1.86
PML-220ENST00000569477 CEP164Q9UPV0 1460 aa26.6■■□□□ 1.85
PML-220ENST00000569477 BAZ1BQ9UIG0 1483 aaKnown RBP26.59■■□□□ 1.85
PML-220ENST00000569477 KIF21BO75037 1637 aa26.56■■□□□ 1.84
PML-220ENST00000569477 DIEXFQ68CQ4 756 aaKnown RBP26.52■■□□□ 1.84
PML-220ENST00000569477 CLIP1P30622 1438 aa26.49■■□□□ 1.83
PML-220ENST00000569477 RAPGEF2Q9Y4G8 1499 aa26.43■■□□□ 1.82
PML-220ENST00000569477 ACIN1Q9UKV3 1341 aaKnown RBP26.39■■□□□ 1.81
PML-220ENST00000569477 VPS8Q8N3P4 1428 aa26.39■■□□□ 1.81
PML-220ENST00000569477 HNRNPUL2Q1KMD3 747 aaKnown RBP26.37■■□□□ 1.81
PML-220ENST00000569477 NEUROD1Q13562 356 aa26.37■■□□□ 1.81
PML-220ENST00000569477 TOP2BQ02880 1626 aa26.34■■□□□ 1.81
PML-220ENST00000569477 RANGAP1P46060 587 aaPredicted RBP26.33■■□□□ 1.81
PML-220ENST00000569477 ZNF316A6NFI3 1004 aaPredicted RBP26.29■■□□□ 1.8
PML-220ENST00000569477 APLP2Q06481 763 aa26.26■■□□□ 1.79
PML-220ENST00000569477 BIVM-ERCC5R4GMW8 1640 aa26.23■■□□□ 1.79
PML-220ENST00000569477 CENPBP07199 599 aaPredicted RBP26.17■■□□□ 1.78
PML-220ENST00000569477 PELP1Q8IZL8 1130 aaKnown RBP26.17■■□□□ 1.78
PML-220ENST00000569477 PRXQ9BXM0 1461 aa26.14■■□□□ 1.77
PML-220ENST00000569477 NCAPD3P42695 1498 aa26.11■■□□□ 1.77
PML-220ENST00000569477 ERICH3Q5RHP9 1530 aa26.11■■□□□ 1.77
PML-220ENST00000569477 GTF3C3Q9Y5Q9 886 aa26.1■■□□□ 1.77
PML-220ENST00000569477 HMGXB3Q12766 1538 aa26.09■■□□□ 1.77
PML-220ENST00000569477 CUX1P39880 1505 aa26.08■■□□□ 1.77
PML-220ENST00000569477 ARAP1Q96P48 1450 aa26.06■■□□□ 1.76
PML-220ENST00000569477 KANK4Q5T7N3 995 aaPredicted RBP25.98■■□□□ 1.75
PML-220ENST00000569477 KIF27Q86VH2 1401 aa25.96■■□□□ 1.75
PML-220ENST00000569477 MIER1Q8N108 512 aa25.96■■□□□ 1.75
PML-220ENST00000569477 CFTRP13569 1480 aa25.95■■□□□ 1.75
PML-220ENST00000569477 YTHDC1Q96MU7 727 aaKnown RBP25.91■■□□□ 1.74
PML-220ENST00000569477 DHX57Q6P158 1386 aaKnown RBP25.87■■□□□ 1.73
PML-220ENST00000569477 ARHGAP35Q9NRY4 1499 aa25.82■■□□□ 1.72
PML-220ENST00000569477 CLSPNQ9HAW4 1339 aa25.81■■□□□ 1.72
PML-220ENST00000569477 RRBP1Q9P2E9 1410 aaKnown RBP25.8■■□□□ 1.72
PML-220ENST00000569477 IGF1RP08069 1367 aa25.71■■□□□ 1.71
PML-220ENST00000569477 CUX2O14529 1486 aa25.71■■□□□ 1.71
PML-220ENST00000569477 PRDM2Q13029 1718 aa25.7■■□□□ 1.71
PML-220ENST00000569477 CCNB3Q8WWL7 1395 aa25.68■■□□□ 1.7
PML-220ENST00000569477 CADPSQ9ULU8 1353 aa25.64■■□□□ 1.7
PML-220ENST00000569477 ITGAEP38570 1179 aa25.62■■□□□ 1.69
PML-220ENST00000569477 CARMIL1Q5VZK9 1371 aa25.59■■□□□ 1.69
PML-220ENST00000569477 FGD5Q6ZNL6 1462 aa25.59■■□□□ 1.69
PML-220ENST00000569477 TIAM1Q13009 1591 aa25.53■■□□□ 1.68
PML-220ENST00000569477 MAP3K1Q13233 1512 aa25.49■■□□□ 1.67
PML-220ENST00000569477 RAB3GAP2Q9H2M9 1393 aa25.49■■□□□ 1.67
PML-220ENST00000569477 LRRC9Q6ZRR7 1453 aa25.45■■□□□ 1.67
PML-220ENST00000569477 PHLDB1Q86UU1 1377 aa25.42■■□□□ 1.66
PML-220ENST00000569477 P3H3Q8IVL6 736 aa25.42■■□□□ 1.66
PML-220ENST00000569477 MAPKBP1O60336 1514 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms