Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP4Q9BWG4 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
SSBP4Q9BWG4 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP4Q9BWG4 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP4Q9BWG4 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC12.4□□□□□ -0.42
SSBP4Q9BWG4 RNF152P1-201ENST00000397754 604 ntBASIC12.4□□□□□ -0.42
SSBP4Q9BWG4 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP4Q9BWG4 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
SSBP4Q9BWG4 AC087499.1-201ENST00000418141 1075 ntBASIC12.4□□□□□ -0.42
SSBP4Q9BWG4 AC246785.2-201ENST00000432512 513 ntBASIC12.4□□□□□ -0.42
SSBP4Q9BWG4 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC12.4□□□□□ -0.42
SSBP4Q9BWG4 HNRNPA1P23-201ENST00000491091 1133 ntBASIC12.4□□□□□ -0.42
SSBP4Q9BWG4 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
SSBP4Q9BWG4 AC090616.6-201ENST00000582640 721 ntBASIC12.4□□□□□ -0.42
SSBP4Q9BWG4 AC013467.2-201ENST00000605472 835 ntBASIC12.4□□□□□ -0.42
SSBP4Q9BWG4 OR13I1P-201ENST00000609811 1264 ntBASIC12.4□□□□□ -0.42
SSBP4Q9BWG4 AC124864.1-201ENST00000623408 392 ntBASIC12.4□□□□□ -0.42
SSBP4Q9BWG4 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC12.4□□□□□ -0.42
SSBP4Q9BWG4 AC136621.1-201ENST00000624017 2304 ntBASIC12.4□□□□□ -0.42
SSBP4Q9BWG4 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP4Q9BWG4 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP4Q9BWG4 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP4Q9BWG4 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP4Q9BWG4 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
SSBP4Q9BWG4 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC12.4□□□□□ -0.42
SSBP4Q9BWG4 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
SSBP4Q9BWG4 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP4Q9BWG4 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
SSBP4Q9BWG4 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC12.4□□□□□ -0.43
SSBP4Q9BWG4 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC12.4□□□□□ -0.43
SSBP4Q9BWG4 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP4Q9BWG4 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC12.39□□□□□ -0.43
SSBP4Q9BWG4 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC12.39□□□□□ -0.43
SSBP4Q9BWG4 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
SSBP4Q9BWG4 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP4Q9BWG4 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
SSBP4Q9BWG4 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP4Q9BWG4 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP4Q9BWG4 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC12.39□□□□□ -0.43
SSBP4Q9BWG4 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC12.39□□□□□ -0.43
SSBP4Q9BWG4 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP4Q9BWG4 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP4Q9BWG4 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP4Q9BWG4 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC12.39□□□□□ -0.43
SSBP4Q9BWG4 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP4Q9BWG4 AC073508.3-201ENST00000619697 1419 ntBASIC12.39□□□□□ -0.43
SSBP4Q9BWG4 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
SSBP4Q9BWG4 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP4Q9BWG4 SSR4P1-203ENST00000599569 2260 ntBASIC12.39□□□□□ -0.43
SSBP4Q9BWG4 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
SSBP4Q9BWG4 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP4Q9BWG4 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC12.39□□□□□ -0.43
SSBP4Q9BWG4 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP4Q9BWG4 CCS-201ENST00000310190 942 ntTSL 5 BASIC12.39□□□□□ -0.43
SSBP4Q9BWG4 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP4Q9BWG4 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP4Q9BWG4 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP4Q9BWG4 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP4Q9BWG4 AP002414.1-201ENST00000391405 1147 ntBASIC12.39□□□□□ -0.43
SSBP4Q9BWG4 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC12.39□□□□□ -0.43
SSBP4Q9BWG4 HCG24-202ENST00000414398 717 ntTSL 3 BASIC12.39□□□□□ -0.43
SSBP4Q9BWG4 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
SSBP4Q9BWG4 SPDYE13P-201ENST00000445314 798 ntBASIC12.39□□□□□ -0.43
SSBP4Q9BWG4 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC12.39□□□□□ -0.43
SSBP4Q9BWG4 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC12.39□□□□□ -0.43
SSBP4Q9BWG4 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
SSBP4Q9BWG4 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP4Q9BWG4 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC12.39□□□□□ -0.43
SSBP4Q9BWG4 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP4Q9BWG4 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC12.39□□□□□ -0.43
SSBP4Q9BWG4 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP4Q9BWG4 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP4Q9BWG4 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP4Q9BWG4 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
SSBP4Q9BWG4 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
SSBP4Q9BWG4 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP4Q9BWG4 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP4Q9BWG4 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC12.39□□□□□ -0.43
SSBP4Q9BWG4 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC12.39□□□□□ -0.43
SSBP4Q9BWG4 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
SSBP4Q9BWG4 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
SSBP4Q9BWG4 AC112504.1-201ENST00000623415 1841 ntBASIC12.39□□□□□ -0.43
SSBP4Q9BWG4 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP4Q9BWG4 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP4Q9BWG4 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP4Q9BWG4 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP4Q9BWG4 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC12.39□□□□□ -0.43
SSBP4Q9BWG4 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
SSBP4Q9BWG4 CICP14-201ENST00000629111 2732 ntBASIC12.39□□□□□ -0.43
SSBP4Q9BWG4 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
SSBP4Q9BWG4 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC12.38□□□□□ -0.43
SSBP4Q9BWG4 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SSBP4Q9BWG4 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC12.38□□□□□ -0.43
SSBP4Q9BWG4 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
SSBP4Q9BWG4 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSBP4Q9BWG4 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSBP4Q9BWG4 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
SSBP4Q9BWG4 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSBP4Q9BWG4 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSBP4Q9BWG4 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms