RNA–Protein interactions for RNA: ENST00000394207.6

ZFYVE1-202, Transcript of zinc finger FYVE-type containing 1, humanhuman

TSL 2 BASIC

Gene ZFYVE1, Length 1,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE1-202ENST00000394207 NISCHQ9Y2I1 1504 aa48.59■■■■■ 5.37
ZFYVE1-202ENST00000394207 ABCC9O60706 1549 aa43.76■■■■■ 4.6
ZFYVE1-202ENST00000394207 CCDC180Q9P1Z9 1646 aa43.68■■■■■ 4.58
ZFYVE1-202ENST00000394207 RB1CC1Q8TDY2 1594 aa41.62■■■■■ 4.25
ZFYVE1-202ENST00000394207 NACADO15069 1562 aa41.31■■■■■ 4.2
ZFYVE1-202ENST00000394207 DNAJC5BQ9UF47 199 aa41.16■■■■■ 4.18
ZFYVE1-202ENST00000394207 DCAF8L2P0C7V8 631 aa41.07■■■■■ 4.17
ZFYVE1-202ENST00000394207 PABPN1Q86U42 306 aaKnown RBP eCLIP40.73■■■■■ 4.11
ZFYVE1-202ENST00000394207 UNC13AQ9UPW8 1703 aa40.73■■■■■ 4.11
ZFYVE1-202ENST00000394207 MYO15BQ96JP2 1530 aa40.7■■■■■ 4.11
ZFYVE1-202ENST00000394207 BICRAQ9NZM4 1560 aa40.41■■■■■ 4.06
ZFYVE1-202ENST00000394207 ZCCHC6Q5VYS8 1495 aaKnown RBP40.24■■■■■ 4.03
ZFYVE1-202ENST00000394207 DCAF1Q9Y4B6 1507 aa40.14■■■■■ 4.02
ZFYVE1-202ENST00000394207 SHROOM4Q9ULL8 1493 aa39.85■■■■□ 3.97
ZFYVE1-202ENST00000394207 SCRIBQ14160 1630 aa39.77■■■■□ 3.96
ZFYVE1-202ENST00000394207 CC2D2AQ9P2K1 1620 aa39.54■■■■□ 3.92
ZFYVE1-202ENST00000394207 CECR2Q9BXF3 1484 aa39.43■■■■□ 3.9
ZFYVE1-202ENST00000394207 EIF4G1Q04637 1599 aaKnown RBP39.42■■■■□ 3.9
ZFYVE1-202ENST00000394207 NCAPD3P42695 1498 aa38.14■■■■□ 3.7
ZFYVE1-202ENST00000394207 ATAD2BQ9ULI0 1458 aa38■■■■□ 3.67
ZFYVE1-202ENST00000394207 SMARCA4P51532 1647 aa37.94■■■■□ 3.66
ZFYVE1-202ENST00000394207 DNAJC5Q9H3Z4 198 aa37.89■■■■□ 3.66
ZFYVE1-202ENST00000394207 SMARCA2P51531 1590 aa37.89■■■■□ 3.66
ZFYVE1-202ENST00000394207 HMGXB3Q12766 1538 aa37.83■■■■□ 3.65
ZFYVE1-202ENST00000394207 ERCC6Q03468 1493 aa37.79■■■■□ 3.64
ZFYVE1-202ENST00000394207 CUX2O14529 1486 aa37.77■■■■□ 3.64
ZFYVE1-202ENST00000394207 BAZ1AQ9NRL2 1556 aaPredicted RBP37.73■■■■□ 3.63
ZFYVE1-202ENST00000394207 BAZ1BQ9UIG0 1483 aaKnown RBP37.62■■■■□ 3.61
ZFYVE1-202ENST00000394207 PEG3Q9GZU2 1588 aa37.58■■■■□ 3.61
ZFYVE1-202ENST00000394207 NESP48681 1621 aa37.56■■■■□ 3.6
ZFYVE1-202ENST00000394207 MROH2BQ7Z745 1585 aa37.44■■■■□ 3.58
ZFYVE1-202ENST00000394207 LAMC3Q9Y6N6 1575 aa37.29■■■■□ 3.56
ZFYVE1-202ENST00000394207 THOC2Q8NI27 1593 aaKnown RBP37.21■■■■□ 3.55
ZFYVE1-202ENST00000394207 KIF21AQ7Z4S6 1674 aa37.1■■■■□ 3.53
ZFYVE1-202ENST00000394207 PDS5BQ9NTI5 1447 aa37.09■■■■□ 3.53
ZFYVE1-202ENST00000394207 WIZO95785 1651 aa37.01■■■■□ 3.52
ZFYVE1-202ENST00000394207 CADPSQ9ULU8 1353 aa36.97■■■■□ 3.51
ZFYVE1-202ENST00000394207 MRC2Q9UBG0 1479 aa36.76■■■■□ 3.48
ZFYVE1-202ENST00000394207 WDR62O43379 1518 aa36.68■■■■□ 3.46
ZFYVE1-202ENST00000394207 RSF1Q96T23 1441 aaPredicted RBP36.62■■■■□ 3.45
ZFYVE1-202ENST00000394207 CEP164Q9UPV0 1460 aa36.59■■■■□ 3.45
ZFYVE1-202ENST00000394207 FANCD2Q9BXW9 1451 aa36.55■■■■□ 3.44
ZFYVE1-202ENST00000394207 CFTRP13569 1480 aa36.52■■■■□ 3.44
ZFYVE1-202ENST00000394207 TOP2AP11388 1531 aaKnown RBP36.51■■■■□ 3.44
ZFYVE1-202ENST00000394207 URB2Q14146 1524 aaKnown RBP36.25■■■■□ 3.39
ZFYVE1-202ENST00000394207 PRDM2Q13029 1718 aa36.2■■■■□ 3.39
ZFYVE1-202ENST00000394207 TRIM41Q8WV44 630 aa36.16■■■■□ 3.38
ZFYVE1-202ENST00000394207 CCDC88BA6NC98 1476 aa36.11■■■■□ 3.37
ZFYVE1-202ENST00000394207 OSCARQ8IYS5 282 aa36.04■■■■□ 3.36
ZFYVE1-202ENST00000394207 IFT140Q96RY7 1462 aa35.86■■■■□ 3.33
ZFYVE1-202ENST00000394207 TOPBP1Q92547 1522 aa35.84■■■■□ 3.33
ZFYVE1-202ENST00000394207 ZNF608Q9ULD9 1512 aaPredicted RBP35.82■■■■□ 3.32
ZFYVE1-202ENST00000394207 ABCC8Q09428 1581 aa35.77■■■■□ 3.32
ZFYVE1-202ENST00000394207 DNMBPQ6XZF7 1577 aa35.71■■■■□ 3.31
ZFYVE1-202ENST00000394207 EIF4G3O43432 1585 aaKnown RBP35.62■■■■□ 3.29
ZFYVE1-202ENST00000394207 RIMBP3CA6NJZ7 1639 aa35.58■■■■□ 3.29
ZFYVE1-202ENST00000394207 RIMBP3BA6NNM3 1639 aa35.58■■■■□ 3.29
ZFYVE1-202ENST00000394207 RIMBP3Q9UFD9 1639 aa35.58■■■■□ 3.29
ZFYVE1-202ENST00000394207 TARBP1Q13395 1621 aaKnown RBP35.54■■■■□ 3.28
ZFYVE1-202ENST00000394207 AQRO60306 1485 aaKnown RBP eCLIP35.48■■■■□ 3.27
ZFYVE1-202ENST00000394207 POLA1P09884 1462 aaPredicted RBP35.47■■■■□ 3.27
ZFYVE1-202ENST00000394207 ARHGEF11O15085 1522 aa35.44■■■■□ 3.26
ZFYVE1-202ENST00000394207 CHD1O14646 1710 aa35.4■■■■□ 3.26
ZFYVE1-202ENST00000394207 RAD54L2Q9Y4B4 1467 aa35.34■■■■□ 3.25
ZFYVE1-202ENST00000394207 SOGA1O94964 1423 aa35.32■■■■□ 3.24
ZFYVE1-202ENST00000394207 FBLN2P98095 1184 aa35.28■■■■□ 3.24
ZFYVE1-202ENST00000394207 TDRD9Q8NDG6 1382 aaKnown RBP35.25■■■■□ 3.23
ZFYVE1-202ENST00000394207 FGD5Q6ZNL6 1462 aa35.22■■■■□ 3.23
ZFYVE1-202ENST00000394207 CYB5RLQ6IPT4 315 aa35.2■■■■□ 3.23
ZFYVE1-202ENST00000394207 WDR97A6NE52 1622 aa35.18■■■■□ 3.22
ZFYVE1-202ENST00000394207 CUX1P39880 1505 aa35.18■■■■□ 3.22
ZFYVE1-202ENST00000394207 SNAPC4Q5SXM2 1469 aa35.11■■■■□ 3.21
ZFYVE1-202ENST00000394207 ARAP1Q96P48 1450 aa35.09■■■■□ 3.21
ZFYVE1-202ENST00000394207 MAGI1Q96QZ7 1491 aaPredicted RBP35.03■■■■□ 3.2
ZFYVE1-202ENST00000394207 CHMP7Q8WUX9 453 aaPredicted RBP35.01■■■■□ 3.2
ZFYVE1-202ENST00000394207 GRIN2BQ13224 1484 aa35.01■■■■□ 3.19
ZFYVE1-202ENST00000394207 CLASP1Q7Z460 1538 aa34.97■■■■□ 3.19
ZFYVE1-202ENST00000394207 SYNJ1O43426 1573 aa34.95■■■■□ 3.18
ZFYVE1-202ENST00000394207 SUPT5HO00267 1087 aaKnown RBP34.92■■■■□ 3.18
ZFYVE1-202ENST00000394207 SYNJ2O15056 1496 aa34.91■■■■□ 3.18
ZFYVE1-202ENST00000394207 PBRM1Q86U86 1689 aa34.89■■■■□ 3.18
ZFYVE1-202ENST00000394207 GAPVD1Q14C86 1478 aa34.88■■■■□ 3.17
ZFYVE1-202ENST00000394207 TRHP20396 242 aaPredicted RBP34.84■■■■□ 3.17
ZFYVE1-202ENST00000394207 ABCA10Q8WWZ4 1543 aa34.82■■■■□ 3.16
ZFYVE1-202ENST00000394207 ABCA5Q8WWZ7 1642 aa34.79■■■■□ 3.16
ZFYVE1-202ENST00000394207 WRNQ14191 1432 aaPredicted RBP eCLIP34.66■■■■□ 3.14
ZFYVE1-202ENST00000394207 BIVM-ERCC5R4GMW8 1640 aa34.61■■■■□ 3.13
ZFYVE1-202ENST00000394207 TOP2BQ02880 1626 aa34.6■■■■□ 3.13
ZFYVE1-202ENST00000394207 GRIN2AQ12879 1464 aa34.56■■■■□ 3.12
ZFYVE1-202ENST00000394207 ADAMTS12P58397 1594 aa34.53■■■■□ 3.12
ZFYVE1-202ENST00000394207 NUP160Q12769 1436 aa34.45■■■■□ 3.11
ZFYVE1-202ENST00000394207 CEP170Q5SW79 1584 aa34.45■■■■□ 3.1
ZFYVE1-202ENST00000394207 FHAD1B1AJZ9 1412 aa34.43■■■■□ 3.1
ZFYVE1-202ENST00000394207 ERCC6L2Q5T890 1561 aa34.42■■■■□ 3.1
ZFYVE1-202ENST00000394207 ERICH3Q5RHP9 1530 aa34.4■■■■□ 3.1
ZFYVE1-202ENST00000394207 SHROOM2Q13796 1616 aa34.33■■■■□ 3.09
ZFYVE1-202ENST00000394207 PRG4Q92954 1404 aaPredicted RBP34.13■■■■□ 3.05
ZFYVE1-202ENST00000394207 JPH4Q96JJ6 628 aa34.11■■■■□ 3.05
ZFYVE1-202ENST00000394207 RUSC2Q8N2Y8 1516 aa34.04■■■■□ 3.04
ZFYVE1-202ENST00000394207 KIF13AQ9H1H9 1805 aa33.95■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms