RNA–Protein interactions for RNA: ENST00000263102.6

CCDC6-201, Transcript of coiled-coil domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC6, Length 5,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-201ENST00000263102 DCAF8L2P0C7V8 631 aa26.34■■□□□ 1.81
CCDC6-201ENST00000263102 EHMT2Q96KQ7 1210 aa24.4■■□□□ 1.5
CCDC6-201ENST00000263102 SUPT5HO00267 1087 aaKnown RBP24.18■■□□□ 1.46
CCDC6-201ENST00000263102 FAM9AQ8IZU1 332 aaPredicted RBP23.69■■□□□ 1.38
CCDC6-201ENST00000263102 APLP2Q06481 763 aa23.64■■□□□ 1.37
CCDC6-201ENST00000263102 PELP1Q8IZL8 1130 aaKnown RBP23.63■■□□□ 1.37
CCDC6-201ENST00000263102 SHROOM4Q9ULL8 1493 aa23.61■■□□□ 1.37
CCDC6-201ENST00000263102 TTBK1Q5TCY1 1321 aaPredicted RBP23.48■■□□□ 1.35
CCDC6-201ENST00000263102 RANGAP1P46060 587 aaPredicted RBP23.34■■□□□ 1.33
CCDC6-201ENST00000263102 ATP1B4Q9UN42 357 aaPredicted RBP23.25■■□□□ 1.31
CCDC6-201ENST00000263102 ERICH6Q7L0X2 663 aa23.03■■□□□ 1.28
CCDC6-201ENST00000263102 MYT1LQ9UL68 1186 aa22.81■■□□□ 1.24
CCDC6-201ENST00000263102 PCGF6Q9BYE7 350 aa22.69■■□□□ 1.22
CCDC6-201ENST00000263102 CCER1Q8TC90 406 aaPredicted RBP22.65■■□□□ 1.22
CCDC6-201ENST00000263102 CHIC1Q5VXU3 224 aa22.63■■□□□ 1.21
CCDC6-201ENST00000263102 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.38■■□□□ 1.17
CCDC6-201ENST00000263102 HNRNPUL2Q1KMD3 747 aaKnown RBP22.38■■□□□ 1.17
CCDC6-201ENST00000263102 UBTFP17480 764 aaKnown RBP22.36■■□□□ 1.17
CCDC6-201ENST00000263102 POLR3GLQ9BT43 218 aa22.36■■□□□ 1.17
CCDC6-201ENST00000263102 NEFLP07196 543 aa22.27■■□□□ 1.16
CCDC6-201ENST00000263102 SLC4A1APQ9BWU0 796 aaKnown RBP22.25■■□□□ 1.15
CCDC6-201ENST00000263102 YTHDC1Q96MU7 727 aaKnown RBP22.24■■□□□ 1.15
CCDC6-201ENST00000263102 CENPBP07199 599 aaPredicted RBP22.21■■□□□ 1.15
CCDC6-201ENST00000263102 CNGB1Q14028 1251 aaPredicted RBP22.21■■□□□ 1.15
CCDC6-201ENST00000263102 TRIM41Q8WV44 630 aa22.18■■□□□ 1.14
CCDC6-201ENST00000263102 MYT1Q01538 1121 aa22.17■■□□□ 1.14
CCDC6-201ENST00000263102 NISCHQ9Y2I1 1504 aa22.1■■□□□ 1.13
CCDC6-201ENST00000263102 DAXXQ9UER7 740 aaPredicted RBP22.07■■□□□ 1.12
CCDC6-201ENST00000263102 ITGAEP38570 1179 aa22.02■■□□□ 1.12
CCDC6-201ENST00000263102 PPARGC1BQ86YN6 1023 aaKnown RBP22■■□□□ 1.11
CCDC6-201ENST00000263102 ZEB1P37275 1124 aaPredicted RBP21.73■■□□□ 1.07
CCDC6-201ENST00000263102 SLC24A1O60721 1099 aa21.7■■□□□ 1.06
CCDC6-201ENST00000263102 CLSPNQ9HAW4 1339 aa21.64■■□□□ 1.05
CCDC6-201ENST00000263102 BCL11AQ9H165 835 aa21.56■■□□□ 1.04
CCDC6-201ENST00000263102 BCANQ96GW7 911 aa21.55■■□□□ 1.04
CCDC6-201ENST00000263102 ZNF316A6NFI3 1004 aaPredicted RBP21.5■■□□□ 1.03
CCDC6-201ENST00000263102 PLPPR3Q6T4P5 718 aa21.42■■□□□ 1.02
CCDC6-201ENST00000263102 FBLN2P98095 1184 aa21.33■■□□□ 1
CCDC6-201ENST00000263102 ZBTB47Q9UFB7 747 aaPredicted RBP21.31■■□□□ 1
CCDC6-201ENST00000263102 TRIM52Q96A61 297 aa21.31■■□□□ 1
CCDC6-201ENST00000263102 ZNF326Q5BKZ1 582 aaKnown RBP21.25■□□□□ 0.99
CCDC6-201ENST00000263102 FAM50AQ14320 339 aaKnown RBP21.23■□□□□ 0.99
CCDC6-201ENST00000263102 RTL5Q5HYW3 569 aaPredicted RBP21.13■□□□□ 0.97
CCDC6-201ENST00000263102 CANXP27824 592 aaKnown RBP21.05■□□□□ 0.96
CCDC6-201ENST00000263102 NEUROD1Q13562 356 aa21.04■□□□□ 0.96
CCDC6-201ENST00000263102 ESF1Q9H501 851 aaKnown RBP21.03■□□□□ 0.96
CCDC6-201ENST00000263102 NEFMP07197 916 aa21.01■□□□□ 0.95
CCDC6-201ENST00000263102 ARID3CA6NKF2 412 aa21■□□□□ 0.95
CCDC6-201ENST00000263102 A0A0G2JS52 829 aa20.96■□□□□ 0.95
CCDC6-201ENST00000263102 SCAF1Q9H7N4 1312 aaKnown RBP20.92■□□□□ 0.94
CCDC6-201ENST00000263102 TRIM26Q12899 539 aaPredicted RBP20.9■□□□□ 0.94
CCDC6-201ENST00000263102 PABPN1Q86U42 306 aaKnown RBP eCLIP20.89■□□□□ 0.94
CCDC6-201ENST00000263102 STAG3Q9UJ98 1225 aa20.87■□□□□ 0.93
CCDC6-201ENST00000263102 CHGAP10645 457 aaKnown RBP20.8■□□□□ 0.92
CCDC6-201ENST00000263102 LOC105371045A0A1W2PR82 267 aa20.78■□□□□ 0.92
CCDC6-201ENST00000263102 ZNF777Q9ULD5 760 aaPredicted RBP20.77■□□□□ 0.92
CCDC6-201ENST00000263102 PLEKHG5O94827 1062 aa20.76■□□□□ 0.91
CCDC6-201ENST00000263102 HRCP23327 699 aa20.73■□□□□ 0.91
CCDC6-201ENST00000263102 ZBTB7CA1YPR0 619 aa20.64■□□□□ 0.9
CCDC6-201ENST00000263102 P3H3Q8IVL6 736 aa20.64■□□□□ 0.9
CCDC6-201ENST00000263102 ANP32CO43423 234 aa20.58■□□□□ 0.89
CCDC6-201ENST00000263102 SENP3Q9H4L4 574 aaPredicted RBP20.55■□□□□ 0.88
CCDC6-201ENST00000263102 NPM1P06748 294 aaKnown RBP eCLIP20.55■□□□□ 0.88
CCDC6-201ENST00000263102 DIEXFQ68CQ4 756 aaKnown RBP20.49■□□□□ 0.87
CCDC6-201ENST00000263102 NPM2Q86SE8 214 aaKnown RBP20.49■□□□□ 0.87
CCDC6-201ENST00000263102 CDK11AQ9UQ88 783 aaPredicted RBP20.47■□□□□ 0.87
CCDC6-201ENST00000263102 HSP90AA1P07900 732 aaKnown RBP20.46■□□□□ 0.87
CCDC6-201ENST00000263102 C14orf37Q86TY3 774 aa20.45■□□□□ 0.86
CCDC6-201ENST00000263102 ABCC9O60706 1549 aa20.42■□□□□ 0.86
CCDC6-201ENST00000263102 TULP1O00294 542 aaPredicted RBP20.42■□□□□ 0.86
CCDC6-201ENST00000263102 CDK11BP21127 795 aaKnown RBP20.42■□□□□ 0.86
CCDC6-201ENST00000263102 HAP1P54257 671 aaPredicted RBP20.38■□□□□ 0.85
CCDC6-201ENST00000263102 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.34■□□□□ 0.851e-7■■□□□ 13.2
CCDC6-201ENST00000263102 ARXQ96QS3 562 aa20.33■□□□□ 0.85
CCDC6-201ENST00000263102 ANP32BQ92688 251 aaKnown RBP20.31■□□□□ 0.84
CCDC6-201ENST00000263102 SALL2Q9Y467 1007 aaPredicted RBP20.29■□□□□ 0.84
CCDC6-201ENST00000263102 ANP32AP39687 249 aaKnown RBP20.21■□□□□ 0.83
CCDC6-201ENST00000263102 ARID4BQ4LE39 1312 aaPredicted RBP20.18■□□□□ 0.82
CCDC6-201ENST00000263102 NCBP3Q53F19 620 aaKnown RBP20.16■□□□□ 0.82
CCDC6-201ENST00000263102 NPHP1O15259 732 aa20.16■□□□□ 0.82
CCDC6-201ENST00000263102 PPP1R15AO75807 674 aaPredicted RBP20.16■□□□□ 0.82
CCDC6-201ENST00000263102 UPF2Q9HAU5 1272 aaKnown RBP20.13■□□□□ 0.81
CCDC6-201ENST00000263102 EIF5BO60841 1220 aaKnown RBP20.05■□□□□ 0.8
CCDC6-201ENST00000263102 TAOK2Q9UL54 1235 aa20.04■□□□□ 0.8
CCDC6-201ENST00000263102 LMOD2Q6P5Q4 547 aa20.04■□□□□ 0.8
CCDC6-201ENST00000263102 KDM2AQ9Y2K7 1162 aa20.04■□□□□ 0.8
CCDC6-201ENST00000263102 FAM9BQ8IZU0 186 aa20.03■□□□□ 0.8
CCDC6-201ENST00000263102 CHIC2Q9UKJ5 165 aa20.01■□□□□ 0.79
CCDC6-201ENST00000263102 WDR43Q15061 677 aaKnown RBP eCLIP19.99■□□□□ 0.79
CCDC6-201ENST00000263102 MYH16Q9H6N6 1097 aa19.99■□□□□ 0.79
CCDC6-201ENST00000263102 GTF3C3Q9Y5Q9 886 aa19.99■□□□□ 0.79
CCDC6-201ENST00000263102 TPRNQ4KMQ1 711 aa19.96■□□□□ 0.79
CCDC6-201ENST00000263102 KCNH8Q96L42 1107 aa19.93■□□□□ 0.78
CCDC6-201ENST00000263102 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.92■□□□□ 0.78
CCDC6-201ENST00000263102 TRHP20396 242 aaPredicted RBP19.91■□□□□ 0.78
CCDC6-201ENST00000263102 TONSLQ96HA7 1378 aa19.88■□□□□ 0.77
CCDC6-201ENST00000263102 TMC1Q8TDI8 760 aa19.88■□□□□ 0.77
CCDC6-201ENST00000263102 PPM1GO15355 546 aaPredicted RBP19.87■□□□□ 0.77
CCDC6-201ENST00000263102 CLSTN1O94985 981 aa19.87■□□□□ 0.77
CCDC6-201ENST00000263102 HNRNPUQ00839 825 aaKnown RBP eCLIP19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms