RNA–Protein interactions for RNA: ENST00000640298.1

RHOXF1P3-203, Transcript of Rhox homeobox family member 1 pseudogene 3, humanhuman

TSL 5 BASIC

Gene RHOXF1P3, Length 2,668 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF1P3-203ENST00000640298 NISCHQ9Y2I1 1504 aa31.83■■■□□ 2.69
RHOXF1P3-203ENST00000640298 CCDC180Q9P1Z9 1646 aa27.38■■□□□ 1.97
RHOXF1P3-203ENST00000640298 SHROOM4Q9ULL8 1493 aa27.01■■□□□ 1.91
RHOXF1P3-203ENST00000640298 ZCCHC6Q5VYS8 1495 aaKnown RBP26.89■■□□□ 1.9
RHOXF1P3-203ENST00000640298 SUPT5HO00267 1087 aaKnown RBP26.6■■□□□ 1.85
RHOXF1P3-203ENST00000640298 DCAF8L2P0C7V8 631 aa26.46■■□□□ 1.83
RHOXF1P3-203ENST00000640298 DCAF1Q9Y4B6 1507 aa26.17■■□□□ 1.78
RHOXF1P3-203ENST00000640298 CHIC1Q5VXU3 224 aa26.04■■□□□ 1.76
RHOXF1P3-203ENST00000640298 MYO15BQ96JP2 1530 aa25.92■■□□□ 1.74
RHOXF1P3-203ENST00000640298 ABCC9O60706 1549 aa25.79■■□□□ 1.72
RHOXF1P3-203ENST00000640298 HRCP23327 699 aa25.52■■□□□ 1.68
RHOXF1P3-203ENST00000640298 SCRIBQ14160 1630 aa25.51■■□□□ 1.67
RHOXF1P3-203ENST00000640298 NACADO15069 1562 aa25.45■■□□□ 1.66
RHOXF1P3-203ENST00000640298 PCGF6Q9BYE7 350 aa25.33■■□□□ 1.65
RHOXF1P3-203ENST00000640298 LOC105371045A0A1W2PR82 267 aa25.2■■□□□ 1.62
RHOXF1P3-203ENST00000640298 RSF1Q96T23 1441 aaPredicted RBP25.18■■□□□ 1.62
RHOXF1P3-203ENST00000640298 RB1CC1Q8TDY2 1594 aa25.15■■□□□ 1.62
RHOXF1P3-203ENST00000640298 TRIM26Q12899 539 aaPredicted RBP24.9■■□□□ 1.58
RHOXF1P3-203ENST00000640298 PPARGC1BQ86YN6 1023 aaKnown RBP24.84■■□□□ 1.57
RHOXF1P3-203ENST00000640298 TRIM41Q8WV44 630 aa24.83■■□□□ 1.57
RHOXF1P3-203ENST00000640298 CECR2Q9BXF3 1484 aa24.83■■□□□ 1.57
RHOXF1P3-203ENST00000640298 UNC13AQ9UPW8 1703 aa24.71■■□□□ 1.55
RHOXF1P3-203ENST00000640298 MROH2BQ7Z745 1585 aa24.69■■□□□ 1.54
RHOXF1P3-203ENST00000640298 FAM9AQ8IZU1 332 aaPredicted RBP24.53■■□□□ 1.52
RHOXF1P3-203ENST00000640298 WIZO95785 1651 aa24.52■■□□□ 1.52
RHOXF1P3-203ENST00000640298 BAZ1AQ9NRL2 1556 aaPredicted RBP24.51■■□□□ 1.51
RHOXF1P3-203ENST00000640298 PABPN1Q86U42 306 aaKnown RBP eCLIP24.51■■□□□ 1.51
RHOXF1P3-203ENST00000640298 ZEB1P37275 1124 aaPredicted RBP24.47■■□□□ 1.51
RHOXF1P3-203ENST00000640298 BICRAQ9NZM4 1560 aa24.45■■□□□ 1.5
RHOXF1P3-203ENST00000640298 SMARCA4P51532 1647 aa24.37■■□□□ 1.49
RHOXF1P3-203ENST00000640298 EIF4G1Q04637 1599 aaKnown RBP24.29■■□□□ 1.48
RHOXF1P3-203ENST00000640298 EHMT2Q96KQ7 1210 aa24.23■■□□□ 1.47
RHOXF1P3-203ENST00000640298 TOP2AP11388 1531 aaKnown RBP24.18■■□□□ 1.46
RHOXF1P3-203ENST00000640298 CCDC88BA6NC98 1476 aa24.06■■□□□ 1.44
RHOXF1P3-203ENST00000640298 SMARCA2P51531 1590 aa24.02■■□□□ 1.43
RHOXF1P3-203ENST00000640298 ABCC8Q09428 1581 aa23.97■■□□□ 1.43
RHOXF1P3-203ENST00000640298 PEG3Q9GZU2 1588 aa23.95■■□□□ 1.43
RHOXF1P3-203ENST00000640298 WRNQ14191 1432 aaPredicted RBP eCLIP23.92■■□□□ 1.42
RHOXF1P3-203ENST00000640298 ATAD2BQ9ULI0 1458 aa23.88■■□□□ 1.41
RHOXF1P3-203ENST00000640298 EEA1Q15075 1411 aa23.84■■□□□ 1.41
RHOXF1P3-203ENST00000640298 SOGA1O94964 1423 aa23.83■■□□□ 1.41
RHOXF1P3-203ENST00000640298 TNIKQ9UKE5 1360 aa23.83■■□□□ 1.4
RHOXF1P3-203ENST00000640298 CEP162Q5TB80 1403 aa23.82■■□□□ 1.4
RHOXF1P3-203ENST00000640298 BAZ1BQ9UIG0 1483 aaKnown RBP23.79■■□□□ 1.4
RHOXF1P3-203ENST00000640298 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.78■■□□□ 1.4
RHOXF1P3-203ENST00000640298 CCER1Q8TC90 406 aaPredicted RBP23.76■■□□□ 1.39
RHOXF1P3-203ENST00000640298 CSRNP3Q8WYN3 585 aa23.75■■□□□ 1.39
RHOXF1P3-203ENST00000640298 RUSC2Q8N2Y8 1516 aa23.67■■□□□ 1.38
RHOXF1P3-203ENST00000640298 GOLGA3Q08378 1498 aa23.62■■□□□ 1.37
RHOXF1P3-203ENST00000640298 UBTFP17480 764 aaKnown RBP23.6■■□□□ 1.37
RHOXF1P3-203ENST00000640298 SCAF1Q9H7N4 1312 aaKnown RBP23.56■■□□□ 1.36
RHOXF1P3-203ENST00000640298 NCAPD3P42695 1498 aa23.53■■□□□ 1.36
RHOXF1P3-203ENST00000640298 TTBK1Q5TCY1 1321 aaPredicted RBP23.51■■□□□ 1.35
RHOXF1P3-203ENST00000640298 HMGXB3Q12766 1538 aa23.5■■□□□ 1.35
RHOXF1P3-203ENST00000640298 CEP164Q9UPV0 1460 aa23.49■■□□□ 1.35
RHOXF1P3-203ENST00000640298 SYNJ1O43426 1573 aa23.47■■□□□ 1.35
RHOXF1P3-203ENST00000640298 KIF21BO75037 1637 aa23.45■■□□□ 1.34
RHOXF1P3-203ENST00000640298 DIEXFQ68CQ4 756 aaKnown RBP23.4■■□□□ 1.34
RHOXF1P3-203ENST00000640298 PELP1Q8IZL8 1130 aaKnown RBP23.36■■□□□ 1.33
RHOXF1P3-203ENST00000640298 CLIP1P30622 1438 aa23.35■■□□□ 1.33
RHOXF1P3-203ENST00000640298 ACIN1Q9UKV3 1341 aaKnown RBP23.33■■□□□ 1.33
RHOXF1P3-203ENST00000640298 VPS8Q8N3P4 1428 aa23.29■■□□□ 1.32
RHOXF1P3-203ENST00000640298 NEUROD1Q13562 356 aa23.25■■□□□ 1.31
RHOXF1P3-203ENST00000640298 RAPGEF2Q9Y4G8 1499 aa23.25■■□□□ 1.31
RHOXF1P3-203ENST00000640298 CC2D2AQ9P2K1 1620 aa23.24■■□□□ 1.31
RHOXF1P3-203ENST00000640298 ZNF316A6NFI3 1004 aaPredicted RBP23.22■■□□□ 1.31
RHOXF1P3-203ENST00000640298 TOP2BQ02880 1626 aa23.21■■□□□ 1.31
RHOXF1P3-203ENST00000640298 CENPBP07199 599 aaPredicted RBP23.18■■□□□ 1.3
RHOXF1P3-203ENST00000640298 CFTRP13569 1480 aa23.18■■□□□ 1.3
RHOXF1P3-203ENST00000640298 HNRNPUL2Q1KMD3 747 aaKnown RBP23.15■■□□□ 1.3
RHOXF1P3-203ENST00000640298 APLP2Q06481 763 aa23.14■■□□□ 1.29
RHOXF1P3-203ENST00000640298 BIVM-ERCC5R4GMW8 1640 aa23.11■■□□□ 1.29
RHOXF1P3-203ENST00000640298 ERICH3Q5RHP9 1530 aa23.07■■□□□ 1.28
RHOXF1P3-203ENST00000640298 PRXQ9BXM0 1461 aa23.07■■□□□ 1.28
RHOXF1P3-203ENST00000640298 CUX1P39880 1505 aa23.04■■□□□ 1.28
RHOXF1P3-203ENST00000640298 CADPSQ9ULU8 1353 aa23.03■■□□□ 1.28
RHOXF1P3-203ENST00000640298 GTF3C3Q9Y5Q9 886 aa23.02■■□□□ 1.28
RHOXF1P3-203ENST00000640298 RANGAP1P46060 587 aaPredicted RBP22.97■■□□□ 1.27
RHOXF1P3-203ENST00000640298 PRDM2Q13029 1718 aa22.96■■□□□ 1.27
RHOXF1P3-203ENST00000640298 ARAP1Q96P48 1450 aa22.95■■□□□ 1.26
RHOXF1P3-203ENST00000640298 CLSPNQ9HAW4 1339 aa22.92■■□□□ 1.26
RHOXF1P3-203ENST00000640298 KIF27Q86VH2 1401 aa22.9■■□□□ 1.26
RHOXF1P3-203ENST00000640298 MIER1Q8N108 512 aa22.86■■□□□ 1.25
RHOXF1P3-203ENST00000640298 KANK4Q5T7N3 995 aaPredicted RBP22.83■■□□□ 1.25
RHOXF1P3-203ENST00000640298 DHX57Q6P158 1386 aaKnown RBP22.81■■□□□ 1.24
RHOXF1P3-203ENST00000640298 FANCD2Q9BXW9 1451 aa22.8■■□□□ 1.24
RHOXF1P3-203ENST00000640298 RRBP1Q9P2E9 1410 aaKnown RBP22.8■■□□□ 1.24
RHOXF1P3-203ENST00000640298 NESP48681 1621 aa22.79■■□□□ 1.24
RHOXF1P3-203ENST00000640298 YTHDC1Q96MU7 727 aaKnown RBP22.75■■□□□ 1.23
RHOXF1P3-203ENST00000640298 DNAJC5BQ9UF47 199 aa22.75■■□□□ 1.23
RHOXF1P3-203ENST00000640298 ARHGAP35Q9NRY4 1499 aa22.73■■□□□ 1.23
RHOXF1P3-203ENST00000640298 FGD5Q6ZNL6 1462 aa22.73■■□□□ 1.23
RHOXF1P3-203ENST00000640298 CUX2O14529 1486 aa22.71■■□□□ 1.23
RHOXF1P3-203ENST00000640298 CCNB3Q8WWL7 1395 aa22.66■■□□□ 1.22
RHOXF1P3-203ENST00000640298 IGF1RP08069 1367 aa22.65■■□□□ 1.22
RHOXF1P3-203ENST00000640298 LAMC3Q9Y6N6 1575 aa22.63■■□□□ 1.21
RHOXF1P3-203ENST00000640298 DNMBPQ6XZF7 1577 aa22.61■■□□□ 1.21
RHOXF1P3-203ENST00000640298 TOPBP1Q92547 1522 aa22.59■■□□□ 1.21
RHOXF1P3-203ENST00000640298 MAP3K1Q13233 1512 aa22.59■■□□□ 1.21
RHOXF1P3-203ENST00000640298 RAD54L2Q9Y4B4 1467 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms