RNA–Protein interactions for RNA: ENST00000580462.1

MED9-202, Transcript of mediator complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene MED9, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED9-202ENST00000580462 NISCHQ9Y2I1 1504 aa45.65■■■■■ 4.9
MED9-202ENST00000580462 CCDC180Q9P1Z9 1646 aa40.75■■■■■ 4.11
MED9-202ENST00000580462 ABCC9O60706 1549 aa40.48■■■■■ 4.07
MED9-202ENST00000580462 RB1CC1Q8TDY2 1594 aa38.7■■■■□ 3.79
MED9-202ENST00000580462 DCAF8L2P0C7V8 631 aa38.61■■■■□ 3.77
MED9-202ENST00000580462 NACADO15069 1562 aa38.52■■■■□ 3.76
MED9-202ENST00000580462 MYO15BQ96JP2 1530 aa38.08■■■■□ 3.69
MED9-202ENST00000580462 ZCCHC6Q5VYS8 1495 aaKnown RBP37.88■■■■□ 3.65
MED9-202ENST00000580462 PABPN1Q86U42 306 aaKnown RBP eCLIP37.81■■■■□ 3.64
MED9-202ENST00000580462 DCAF1Q9Y4B6 1507 aa37.72■■■■□ 3.63
MED9-202ENST00000580462 UNC13AQ9UPW8 1703 aa37.59■■■■□ 3.61
MED9-202ENST00000580462 DNAJC5BQ9UF47 199 aa37.58■■■■□ 3.61
MED9-202ENST00000580462 BICRAQ9NZM4 1560 aa37.41■■■■□ 3.58
MED9-202ENST00000580462 SCRIBQ14160 1630 aa37.18■■■■□ 3.54
MED9-202ENST00000580462 SHROOM4Q9ULL8 1493 aa37.1■■■■□ 3.53
MED9-202ENST00000580462 EIF4G1Q04637 1599 aaKnown RBP36.55■■■■□ 3.44
MED9-202ENST00000580462 CC2D2AQ9P2K1 1620 aa36.52■■■■□ 3.44
MED9-202ENST00000580462 CECR2Q9BXF3 1484 aa36.45■■■■□ 3.43
MED9-202ENST00000580462 NCAPD3P42695 1498 aa35.55■■■■□ 3.28
MED9-202ENST00000580462 SMARCA4P51532 1647 aa35.49■■■■□ 3.27
MED9-202ENST00000580462 ATAD2BQ9ULI0 1458 aa35.48■■■■□ 3.27
MED9-202ENST00000580462 SMARCA2P51531 1590 aa35.44■■■■□ 3.26
MED9-202ENST00000580462 BAZ1AQ9NRL2 1556 aaPredicted RBP35.44■■■■□ 3.26
MED9-202ENST00000580462 HMGXB3Q12766 1538 aa35.29■■■■□ 3.24
MED9-202ENST00000580462 BAZ1BQ9UIG0 1483 aaKnown RBP35.22■■■■□ 3.23
MED9-202ENST00000580462 MROH2BQ7Z745 1585 aa35.14■■■■□ 3.22
MED9-202ENST00000580462 PEG3Q9GZU2 1588 aa35.13■■■■□ 3.21
MED9-202ENST00000580462 ERCC6Q03468 1493 aa35.03■■■■□ 3.2
MED9-202ENST00000580462 NESP48681 1621 aa34.81■■■■□ 3.16
MED9-202ENST00000580462 CUX2O14529 1486 aa34.76■■■■□ 3.15
MED9-202ENST00000580462 WIZO95785 1651 aa34.7■■■■□ 3.15
MED9-202ENST00000580462 LAMC3Q9Y6N6 1575 aa34.68■■■■□ 3.14
MED9-202ENST00000580462 RSF1Q96T23 1441 aaPredicted RBP34.6■■■■□ 3.13
MED9-202ENST00000580462 PDS5BQ9NTI5 1447 aa34.58■■■■□ 3.13
MED9-202ENST00000580462 CADPSQ9ULU8 1353 aa34.55■■■■□ 3.12
MED9-202ENST00000580462 TOP2AP11388 1531 aaKnown RBP34.36■■■■□ 3.09
MED9-202ENST00000580462 DNAJC5Q9H3Z4 198 aa34.35■■■■□ 3.09
MED9-202ENST00000580462 THOC2Q8NI27 1593 aaKnown RBP34.33■■■■□ 3.09
MED9-202ENST00000580462 KIF21AQ7Z4S6 1674 aa34.31■■■■□ 3.08
MED9-202ENST00000580462 MRC2Q9UBG0 1479 aa34.19■■■■□ 3.06
MED9-202ENST00000580462 CFTRP13569 1480 aa34.17■■■■□ 3.06
MED9-202ENST00000580462 CEP164Q9UPV0 1460 aa34.14■■■■□ 3.06
MED9-202ENST00000580462 FANCD2Q9BXW9 1451 aa34.12■■■■□ 3.05
MED9-202ENST00000580462 WDR62O43379 1518 aa34.02■■■■□ 3.04
MED9-202ENST00000580462 CCDC88BA6NC98 1476 aa33.99■■■■□ 3.03
MED9-202ENST00000580462 URB2Q14146 1524 aaKnown RBP33.74■■■□□ 2.99
MED9-202ENST00000580462 PRDM2Q13029 1718 aa33.73■■■□□ 2.99
MED9-202ENST00000580462 ABCC8Q09428 1581 aa33.54■■■□□ 2.96
MED9-202ENST00000580462 SUPT5HO00267 1087 aaKnown RBP33.51■■■□□ 2.95
MED9-202ENST00000580462 TOPBP1Q92547 1522 aa33.48■■■□□ 2.95
MED9-202ENST00000580462 IFT140Q96RY7 1462 aa33.45■■■□□ 2.95
MED9-202ENST00000580462 DNMBPQ6XZF7 1577 aa33.38■■■□□ 2.93
MED9-202ENST00000580462 OSCARQ8IYS5 282 aa33.35■■■□□ 2.93
MED9-202ENST00000580462 ZNF608Q9ULD9 1512 aaPredicted RBP33.28■■■□□ 2.92
MED9-202ENST00000580462 POLA1P09884 1462 aaPredicted RBP33.16■■■□□ 2.9
MED9-202ENST00000580462 SOGA1O94964 1423 aa33.11■■■□□ 2.89
MED9-202ENST00000580462 TRIM41Q8WV44 630 aa33.09■■■□□ 2.89
MED9-202ENST00000580462 EIF4G3O43432 1585 aaKnown RBP33.09■■■□□ 2.89
MED9-202ENST00000580462 AQRO60306 1485 aaKnown RBP eCLIP33.08■■■□□ 2.89
MED9-202ENST00000580462 TARBP1Q13395 1621 aaKnown RBP33.08■■■□□ 2.89
MED9-202ENST00000580462 RAD54L2Q9Y4B4 1467 aa33.04■■■□□ 2.88
MED9-202ENST00000580462 FGD5Q6ZNL6 1462 aa33.02■■■□□ 2.88
MED9-202ENST00000580462 CUX1P39880 1505 aa33■■■□□ 2.87
MED9-202ENST00000580462 TDRD9Q8NDG6 1382 aaKnown RBP32.96■■■□□ 2.87
MED9-202ENST00000580462 FBLN2P98095 1184 aa32.95■■■□□ 2.87
MED9-202ENST00000580462 WDR97A6NE52 1622 aa32.85■■■□□ 2.85
MED9-202ENST00000580462 CHMP7Q8WUX9 453 aaPredicted RBP32.76■■■□□ 2.83
MED9-202ENST00000580462 GRIN2BQ13224 1484 aa32.75■■■□□ 2.83
MED9-202ENST00000580462 SNAPC4Q5SXM2 1469 aa32.74■■■□□ 2.83
MED9-202ENST00000580462 CHD1O14646 1710 aa32.73■■■□□ 2.83
MED9-202ENST00000580462 WRNQ14191 1432 aaPredicted RBP eCLIP32.7■■■□□ 2.83
MED9-202ENST00000580462 MAGI1Q96QZ7 1491 aaPredicted RBP32.7■■■□□ 2.83
MED9-202ENST00000580462 GAPVD1Q14C86 1478 aa32.68■■■□□ 2.82
MED9-202ENST00000580462 ABCA10Q8WWZ4 1543 aa32.67■■■□□ 2.82
MED9-202ENST00000580462 RIMBP3CA6NJZ7 1639 aa32.67■■■□□ 2.82
MED9-202ENST00000580462 RIMBP3BA6NNM3 1639 aa32.67■■■□□ 2.82
MED9-202ENST00000580462 RIMBP3Q9UFD9 1639 aa32.67■■■□□ 2.82
MED9-202ENST00000580462 ARHGEF11O15085 1522 aa32.66■■■□□ 2.82
MED9-202ENST00000580462 SYNJ2O15056 1496 aa32.59■■■□□ 2.81
MED9-202ENST00000580462 TOP2BQ02880 1626 aa32.59■■■□□ 2.81
MED9-202ENST00000580462 BIVM-ERCC5R4GMW8 1640 aa32.54■■■□□ 2.8
MED9-202ENST00000580462 CYB5RLQ6IPT4 315 aa32.53■■■□□ 2.8
MED9-202ENST00000580462 SYNJ1O43426 1573 aa32.52■■■□□ 2.8
MED9-202ENST00000580462 ABCA5Q8WWZ7 1642 aa32.51■■■□□ 2.79
MED9-202ENST00000580462 PBRM1Q86U86 1689 aa32.5■■■□□ 2.79
MED9-202ENST00000580462 CLASP1Q7Z460 1538 aa32.4■■■□□ 2.78
MED9-202ENST00000580462 ARAP1Q96P48 1450 aa32.34■■■□□ 2.77
MED9-202ENST00000580462 FHAD1B1AJZ9 1412 aa32.3■■■□□ 2.76
MED9-202ENST00000580462 GRIN2AQ12879 1464 aa32.29■■■□□ 2.76
MED9-202ENST00000580462 ERICH3Q5RHP9 1530 aa32.28■■■□□ 2.76
MED9-202ENST00000580462 ADAMTS12P58397 1594 aa32.26■■■□□ 2.75
MED9-202ENST00000580462 NUP160Q12769 1436 aa32.15■■■□□ 2.74
MED9-202ENST00000580462 TRHP20396 242 aaPredicted RBP32.13■■■□□ 2.73
MED9-202ENST00000580462 KIF27Q86VH2 1401 aa32.09■■■□□ 2.73
MED9-202ENST00000580462 CEP170Q5SW79 1584 aa32.08■■■□□ 2.73
MED9-202ENST00000580462 IGF1RP08069 1367 aa31.98■■■□□ 2.71
MED9-202ENST00000580462 JPH4Q96JJ6 628 aa31.94■■■□□ 2.7
MED9-202ENST00000580462 PRG4Q92954 1404 aaPredicted RBP31.89■■■□□ 2.7
MED9-202ENST00000580462 ERCC6L2Q5T890 1561 aa31.89■■■□□ 2.7
MED9-202ENST00000580462 SHROOM2Q13796 1616 aa31.89■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms