RNA–Protein interactions for RNA: ENST00000440004.1

AC012618.3-202, humanhuman

TSL 4 BASIC

Gene AC012618.3, Length 472 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012618.3-202ENST00000440004 NISCHQ9Y2I1 1504 aa46.08■■■■■ 4.97
AC012618.3-202ENST00000440004 CCDC180Q9P1Z9 1646 aa41.18■■■■■ 4.18
AC012618.3-202ENST00000440004 ABCC9O60706 1549 aa40.85■■■■■ 4.13
AC012618.3-202ENST00000440004 RB1CC1Q8TDY2 1594 aa39.08■■■■□ 3.85
AC012618.3-202ENST00000440004 NACADO15069 1562 aa38.9■■■■□ 3.82
AC012618.3-202ENST00000440004 DCAF8L2P0C7V8 631 aa38.79■■■■□ 3.8
AC012618.3-202ENST00000440004 MYO15BQ96JP2 1530 aa38.49■■■■□ 3.75
AC012618.3-202ENST00000440004 ZCCHC6Q5VYS8 1495 aaKnown RBP38.27■■■■□ 3.72
AC012618.3-202ENST00000440004 DCAF1Q9Y4B6 1507 aa38.12■■■■□ 3.69
AC012618.3-202ENST00000440004 PABPN1Q86U42 306 aaKnown RBP eCLIP38.1■■■■□ 3.69
AC012618.3-202ENST00000440004 UNC13AQ9UPW8 1703 aa38.01■■■■□ 3.68
AC012618.3-202ENST00000440004 DNAJC5BQ9UF47 199 aa37.96■■■■□ 3.67
AC012618.3-202ENST00000440004 BICRAQ9NZM4 1560 aa37.84■■■■□ 3.65
AC012618.3-202ENST00000440004 SCRIBQ14160 1630 aa37.53■■■■□ 3.6
AC012618.3-202ENST00000440004 SHROOM4Q9ULL8 1493 aa37.5■■■■□ 3.59
AC012618.3-202ENST00000440004 EIF4G1Q04637 1599 aaKnown RBP36.92■■■■□ 3.5
AC012618.3-202ENST00000440004 CC2D2AQ9P2K1 1620 aa36.9■■■■□ 3.5
AC012618.3-202ENST00000440004 CECR2Q9BXF3 1484 aa36.79■■■■□ 3.48
AC012618.3-202ENST00000440004 NCAPD3P42695 1498 aa35.91■■■■□ 3.34
AC012618.3-202ENST00000440004 SMARCA4P51532 1647 aa35.84■■■■□ 3.33
AC012618.3-202ENST00000440004 ATAD2BQ9ULI0 1458 aa35.83■■■■□ 3.33
AC012618.3-202ENST00000440004 SMARCA2P51531 1590 aa35.77■■■■□ 3.32
AC012618.3-202ENST00000440004 BAZ1AQ9NRL2 1556 aaPredicted RBP35.77■■■■□ 3.32
AC012618.3-202ENST00000440004 HMGXB3Q12766 1538 aa35.66■■■■□ 3.3
AC012618.3-202ENST00000440004 BAZ1BQ9UIG0 1483 aaKnown RBP35.53■■■■□ 3.28
AC012618.3-202ENST00000440004 PEG3Q9GZU2 1588 aa35.51■■■■□ 3.28
AC012618.3-202ENST00000440004 MROH2BQ7Z745 1585 aa35.48■■■■□ 3.27
AC012618.3-202ENST00000440004 ERCC6Q03468 1493 aa35.31■■■■□ 3.24
AC012618.3-202ENST00000440004 NESP48681 1621 aa35.16■■■■□ 3.22
AC012618.3-202ENST00000440004 CUX2O14529 1486 aa35.12■■■■□ 3.21
AC012618.3-202ENST00000440004 WIZO95785 1651 aa35.03■■■■□ 3.2
AC012618.3-202ENST00000440004 LAMC3Q9Y6N6 1575 aa35.03■■■■□ 3.2
AC012618.3-202ENST00000440004 RSF1Q96T23 1441 aaPredicted RBP34.9■■■■□ 3.18
AC012618.3-202ENST00000440004 PDS5BQ9NTI5 1447 aa34.87■■■■□ 3.17
AC012618.3-202ENST00000440004 CADPSQ9ULU8 1353 aa34.85■■■■□ 3.17
AC012618.3-202ENST00000440004 THOC2Q8NI27 1593 aaKnown RBP34.73■■■■□ 3.15
AC012618.3-202ENST00000440004 DNAJC5Q9H3Z4 198 aa34.69■■■■□ 3.14
AC012618.3-202ENST00000440004 TOP2AP11388 1531 aaKnown RBP34.69■■■■□ 3.14
AC012618.3-202ENST00000440004 KIF21AQ7Z4S6 1674 aa34.67■■■■□ 3.14
AC012618.3-202ENST00000440004 CFTRP13569 1480 aa34.51■■■■□ 3.11
AC012618.3-202ENST00000440004 MRC2Q9UBG0 1479 aa34.51■■■■□ 3.11
AC012618.3-202ENST00000440004 CEP164Q9UPV0 1460 aa34.46■■■■□ 3.11
AC012618.3-202ENST00000440004 FANCD2Q9BXW9 1451 aa34.43■■■■□ 3.1
AC012618.3-202ENST00000440004 WDR62O43379 1518 aa34.39■■■■□ 3.1
AC012618.3-202ENST00000440004 CCDC88BA6NC98 1476 aa34.28■■■■□ 3.08
AC012618.3-202ENST00000440004 URB2Q14146 1524 aaKnown RBP34.09■■■■□ 3.05
AC012618.3-202ENST00000440004 PRDM2Q13029 1718 aa34.08■■■■□ 3.05
AC012618.3-202ENST00000440004 ABCC8Q09428 1581 aa33.82■■■■□ 3
AC012618.3-202ENST00000440004 TOPBP1Q92547 1522 aa33.79■■■■□ 3
AC012618.3-202ENST00000440004 IFT140Q96RY7 1462 aa33.75■■■□□ 2.99
AC012618.3-202ENST00000440004 DNMBPQ6XZF7 1577 aa33.71■■■□□ 2.99
AC012618.3-202ENST00000440004 SUPT5HO00267 1087 aaKnown RBP33.64■■■□□ 2.98
AC012618.3-202ENST00000440004 ZNF608Q9ULD9 1512 aaPredicted RBP33.6■■■□□ 2.97
AC012618.3-202ENST00000440004 OSCARQ8IYS5 282 aa33.6■■■□□ 2.97
AC012618.3-202ENST00000440004 POLA1P09884 1462 aaPredicted RBP33.48■■■□□ 2.95
AC012618.3-202ENST00000440004 EIF4G3O43432 1585 aaKnown RBP33.43■■■□□ 2.94
AC012618.3-202ENST00000440004 TARBP1Q13395 1621 aaKnown RBP33.43■■■□□ 2.94
AC012618.3-202ENST00000440004 AQRO60306 1485 aaKnown RBP eCLIP33.37■■■□□ 2.93
AC012618.3-202ENST00000440004 SOGA1O94964 1423 aa33.36■■■□□ 2.93
AC012618.3-202ENST00000440004 CUX1P39880 1505 aa33.33■■■□□ 2.93
AC012618.3-202ENST00000440004 RAD54L2Q9Y4B4 1467 aa33.32■■■□□ 2.92
AC012618.3-202ENST00000440004 TRIM41Q8WV44 630 aa33.32■■■□□ 2.92
AC012618.3-202ENST00000440004 FGD5Q6ZNL6 1462 aa33.31■■■□□ 2.92
AC012618.3-202ENST00000440004 TDRD9Q8NDG6 1382 aaKnown RBP33.23■■■□□ 2.91
AC012618.3-202ENST00000440004 WDR97A6NE52 1622 aa33.19■■■□□ 2.9
AC012618.3-202ENST00000440004 FBLN2P98095 1184 aa33.13■■■□□ 2.89
AC012618.3-202ENST00000440004 CHD1O14646 1710 aa33.06■■■□□ 2.88
AC012618.3-202ENST00000440004 GRIN2BQ13224 1484 aa33.05■■■□□ 2.88
AC012618.3-202ENST00000440004 SNAPC4Q5SXM2 1469 aa33.05■■■□□ 2.88
AC012618.3-202ENST00000440004 RIMBP3CA6NJZ7 1639 aa33.02■■■□□ 2.88
AC012618.3-202ENST00000440004 RIMBP3BA6NNM3 1639 aa33.02■■■□□ 2.88
AC012618.3-202ENST00000440004 RIMBP3Q9UFD9 1639 aa33.02■■■□□ 2.88
AC012618.3-202ENST00000440004 MAGI1Q96QZ7 1491 aaPredicted RBP33.01■■■□□ 2.88
AC012618.3-202ENST00000440004 ARHGEF11O15085 1522 aa32.99■■■□□ 2.87
AC012618.3-202ENST00000440004 ABCA10Q8WWZ4 1543 aa32.97■■■□□ 2.87
AC012618.3-202ENST00000440004 WRNQ14191 1432 aaPredicted RBP eCLIP32.96■■■□□ 2.87
AC012618.3-202ENST00000440004 CHMP7Q8WUX9 453 aaPredicted RBP32.96■■■□□ 2.87
AC012618.3-202ENST00000440004 GAPVD1Q14C86 1478 aa32.96■■■□□ 2.87
AC012618.3-202ENST00000440004 TOP2BQ02880 1626 aa32.89■■■□□ 2.86
AC012618.3-202ENST00000440004 SYNJ2O15056 1496 aa32.88■■■□□ 2.85
AC012618.3-202ENST00000440004 BIVM-ERCC5R4GMW8 1640 aa32.87■■■□□ 2.85
AC012618.3-202ENST00000440004 ABCA5Q8WWZ7 1642 aa32.85■■■□□ 2.85
AC012618.3-202ENST00000440004 SYNJ1O43426 1573 aa32.83■■■□□ 2.85
AC012618.3-202ENST00000440004 PBRM1Q86U86 1689 aa32.83■■■□□ 2.85
AC012618.3-202ENST00000440004 CYB5RLQ6IPT4 315 aa32.77■■■□□ 2.84
AC012618.3-202ENST00000440004 CLASP1Q7Z460 1538 aa32.75■■■□□ 2.83
AC012618.3-202ENST00000440004 ARAP1Q96P48 1450 aa32.67■■■□□ 2.82
AC012618.3-202ENST00000440004 GRIN2AQ12879 1464 aa32.6■■■□□ 2.81
AC012618.3-202ENST00000440004 ADAMTS12P58397 1594 aa32.59■■■□□ 2.81
AC012618.3-202ENST00000440004 ERICH3Q5RHP9 1530 aa32.58■■■□□ 2.81
AC012618.3-202ENST00000440004 FHAD1B1AJZ9 1412 aa32.57■■■□□ 2.8
AC012618.3-202ENST00000440004 NUP160Q12769 1436 aa32.47■■■□□ 2.79
AC012618.3-202ENST00000440004 CEP170Q5SW79 1584 aa32.41■■■□□ 2.78
AC012618.3-202ENST00000440004 KIF27Q86VH2 1401 aa32.34■■■□□ 2.77
AC012618.3-202ENST00000440004 TRHP20396 242 aaPredicted RBP32.31■■■□□ 2.76
AC012618.3-202ENST00000440004 IGF1RP08069 1367 aa32.24■■■□□ 2.75
AC012618.3-202ENST00000440004 SHROOM2Q13796 1616 aa32.24■■■□□ 2.75
AC012618.3-202ENST00000440004 ERCC6L2Q5T890 1561 aa32.22■■■□□ 2.75
AC012618.3-202ENST00000440004 JPH4Q96JJ6 628 aa32.17■■■□□ 2.74
AC012618.3-202ENST00000440004 CUL7Q14999 1698 aa32.15■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms