RNA–Protein interactions for RNA: ENST00000324932.11

NUP98-201, Transcript of nucleoporin 98, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP98, Length 6,973 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-201ENST00000324932 DCAF8L2P0C7V8 631 aa24.26■■□□□ 1.47
NUP98-201ENST00000324932 PELP1Q8IZL8 1130 aaKnown RBP23.77■■□□□ 1.4
NUP98-201ENST00000324932 SUPT5HO00267 1087 aaKnown RBP23.42■■□□□ 1.34
NUP98-201ENST00000324932 APLP2Q06481 763 aa22.72■■□□□ 1.23
NUP98-201ENST00000324932 EHMT2Q96KQ7 1210 aa22.72■■□□□ 1.23
NUP98-201ENST00000324932 ERICH6Q7L0X2 663 aa22.71■■□□□ 1.23
NUP98-201ENST00000324932 CENPBP07199 599 aaPredicted RBP22.66■■□□□ 1.22
NUP98-201ENST00000324932 MYT1Q01538 1121 aa22.65■■□□□ 1.22
NUP98-201ENST00000324932 CCER1Q8TC90 406 aaPredicted RBP22.65■■□□□ 1.22
NUP98-201ENST00000324932 SHROOM4Q9ULL8 1493 aa22.59■■□□□ 1.21
NUP98-201ENST00000324932 ZEB1P37275 1124 aaPredicted RBP22.42■■□□□ 1.18
NUP98-201ENST00000324932 PCGF6Q9BYE7 350 aa22.42■■□□□ 1.18
NUP98-201ENST00000324932 NISCHQ9Y2I1 1504 aa22.16■■□□□ 1.14
NUP98-201ENST00000324932 FAM9AQ8IZU1 332 aaPredicted RBP22.14■■□□□ 1.13
NUP98-201ENST00000324932 NEFLP07196 543 aa22.12■■□□□ 1.13
NUP98-201ENST00000324932 TTBK1Q5TCY1 1321 aaPredicted RBP22.09■■□□□ 1.13
NUP98-201ENST00000324932 YTHDC1Q96MU7 727 aaKnown RBP21.83■■□□□ 1.08
NUP98-201ENST00000324932 TRIM41Q8WV44 630 aa21.7■■□□□ 1.06
NUP98-201ENST00000324932 RANGAP1P46060 587 aaPredicted RBP21.64■■□□□ 1.05
NUP98-201ENST00000324932 DAXXQ9UER7 740 aaPredicted RBP21.58■■□□□ 1.04
NUP98-201ENST00000324932 ATP1B4Q9UN42 357 aaPredicted RBP21.54■■□□□ 1.04
NUP98-201ENST00000324932 UBTFP17480 764 aaKnown RBP21.51■■□□□ 1.03
NUP98-201ENST00000324932 TRIM26Q12899 539 aaPredicted RBP21.4■■□□□ 1.02
NUP98-201ENST00000324932 HRCP23327 699 aa21.39■■□□□ 1.01
NUP98-201ENST00000324932 RTL5Q5HYW3 569 aaPredicted RBP21.23■□□□□ 0.99
NUP98-201ENST00000324932 PPARGC1BQ86YN6 1023 aaKnown RBP21.14■□□□□ 0.97
NUP98-201ENST00000324932 ZNF316A6NFI3 1004 aaPredicted RBP21.04■□□□□ 0.96
NUP98-201ENST00000324932 POLR3GLQ9BT43 218 aa21.02■□□□□ 0.96
NUP98-201ENST00000324932 ITGAEP38570 1179 aa20.91■□□□□ 0.94
NUP98-201ENST00000324932 CLSPNQ9HAW4 1339 aa20.89■□□□□ 0.93
NUP98-201ENST00000324932 DIEXFQ68CQ4 756 aaKnown RBP20.88■□□□□ 0.93
NUP98-201ENST00000324932 HNRNPUL2Q1KMD3 747 aaKnown RBP20.84■□□□□ 0.93
NUP98-201ENST00000324932 CNGB1Q14028 1251 aaPredicted RBP20.76■□□□□ 0.91
NUP98-201ENST00000324932 MYT1LQ9UL68 1186 aa20.7■□□□□ 0.9
NUP98-201ENST00000324932 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.69■□□□□ 0.9
NUP98-201ENST00000324932 LOC105371045A0A1W2PR82 267 aa20.67■□□□□ 0.9
NUP98-201ENST00000324932 GTF3C3Q9Y5Q9 886 aa20.65■□□□□ 0.9
NUP98-201ENST00000324932 CHIC1Q5VXU3 224 aa20.63■□□□□ 0.89
NUP98-201ENST00000324932 CDK11AQ9UQ88 783 aaPredicted RBP20.63■□□□□ 0.89
NUP98-201ENST00000324932 BCANQ96GW7 911 aa20.56■□□□□ 0.88
NUP98-201ENST00000324932 SLC4A1APQ9BWU0 796 aaKnown RBP20.54■□□□□ 0.88
NUP98-201ENST00000324932 ANP32CO43423 234 aa20.45■□□□□ 0.86
NUP98-201ENST00000324932 ZBTB47Q9UFB7 747 aaPredicted RBP20.42■□□□□ 0.86
NUP98-201ENST00000324932 ANP32AP39687 249 aaKnown RBP20.35■□□□□ 0.85
NUP98-201ENST00000324932 ACIN1Q9UKV3 1341 aaKnown RBP20.33■□□□□ 0.85
NUP98-201ENST00000324932 FAM50AQ14320 339 aaKnown RBP20.32■□□□□ 0.84
NUP98-201ENST00000324932 TRIM52Q96A61 297 aa20.3■□□□□ 0.84
NUP98-201ENST00000324932 NEUROD1Q13562 356 aa20.28■□□□□ 0.84
NUP98-201ENST00000324932 EIF5BO60841 1220 aaKnown RBP20.24■□□□□ 0.83
NUP98-201ENST00000324932 CANXP27824 592 aaKnown RBP20.21■□□□□ 0.83
NUP98-201ENST00000324932 GLIPR1L2Q4G1C9 344 aa20.2■□□□□ 0.82
NUP98-201ENST00000324932 ANP32BQ92688 251 aaKnown RBP20.16■□□□□ 0.82
NUP98-201ENST00000324932 ZNF326Q5BKZ1 582 aaKnown RBP20.1■□□□□ 0.81
NUP98-201ENST00000324932 NPM2Q86SE8 214 aaKnown RBP20.07■□□□□ 0.8
NUP98-201ENST00000324932 NEFMP07197 916 aa20.04■□□□□ 0.8
NUP98-201ENST00000324932 BCL11AQ9H165 835 aa19.96■□□□□ 0.79
NUP98-201ENST00000324932 FKBP8Q14318 412 aa19.96■□□□□ 0.79
NUP98-201ENST00000324932 UPF2Q9HAU5 1272 aaKnown RBP19.93■□□□□ 0.78
NUP98-201ENST00000324932 HSP90AA1P07900 732 aaKnown RBP19.93■□□□□ 0.78
NUP98-201ENST00000324932 SLC24A1O60721 1099 aa19.86■□□□□ 0.77
NUP98-201ENST00000324932 HNRNPUQ00839 825 aaKnown RBP eCLIP19.77■□□□□ 0.76
NUP98-201ENST00000324932 NBR1Q14596 966 aa19.73■□□□□ 0.75
NUP98-201ENST00000324932 CCDC136Q96JN2 1154 aa19.72■□□□□ 0.75
NUP98-201ENST00000324932 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.67■□□□□ 0.74
NUP98-201ENST00000324932 TONSLQ96HA7 1378 aa19.65■□□□□ 0.74
NUP98-201ENST00000324932 FAM9BQ8IZU0 186 aa19.63■□□□□ 0.73
NUP98-201ENST00000324932 DDX10Q13206 875 aaKnown RBP19.59■□□□□ 0.73
NUP98-201ENST00000324932 CSRNP3Q8WYN3 585 aa19.57■□□□□ 0.72
NUP98-201ENST00000324932 ARXQ96QS3 562 aa19.57■□□□□ 0.72
NUP98-201ENST00000324932 ANP32EQ9BTT0 268 aa19.56■□□□□ 0.72
NUP98-201ENST00000324932 TMC1Q8TDI8 760 aa19.52■□□□□ 0.72
NUP98-201ENST00000324932 SCAF1Q9H7N4 1312 aaKnown RBP19.51■□□□□ 0.71
NUP98-201ENST00000324932 DDRGK1Q96HY6 314 aa19.51■□□□□ 0.71
NUP98-201ENST00000324932 TRIM44Q96DX7 344 aaPredicted RBP19.49■□□□□ 0.71
NUP98-201ENST00000324932 TNNT2P45379 298 aaPredicted RBP19.48■□□□□ 0.71
NUP98-201ENST00000324932 SALL2Q9Y467 1007 aaPredicted RBP19.47■□□□□ 0.71
NUP98-201ENST00000324932 BECN1Q14457 450 aa19.46■□□□□ 0.71
NUP98-201ENST00000324932 ZNF777Q9ULD5 760 aaPredicted RBP19.45■□□□□ 0.7
NUP98-201ENST00000324932 P3H3Q8IVL6 736 aa19.45■□□□□ 0.7
NUP98-201ENST00000324932 MRS2Q9HD23 443 aa19.45■□□□□ 0.7
NUP98-201ENST00000324932 WDR43Q15061 677 aaKnown RBP eCLIP19.43■□□□□ 0.7
NUP98-201ENST00000324932 FBLN2P98095 1184 aa19.42■□□□□ 0.7
NUP98-201ENST00000324932 DCAF1Q9Y4B6 1507 aa19.4■□□□□ 0.7
NUP98-201ENST00000324932 GOLGA6L22H0YM25 854 aa19.4■□□□□ 0.7
NUP98-201ENST00000324932 ERICH6BQ5W0A0 696 aa19.39■□□□□ 0.69
NUP98-201ENST00000324932 NCLP19338 710 aaKnown RBP19.39■□□□□ 0.69
NUP98-201ENST00000324932 CDK11BP21127 795 aaKnown RBP19.38■□□□□ 0.69
NUP98-201ENST00000324932 ARID3CA6NKF2 412 aa19.37■□□□□ 0.69
NUP98-201ENST00000324932 MYH16Q9H6N6 1097 aa19.37■□□□□ 0.69
NUP98-201ENST00000324932 MIER1Q8N108 512 aa19.35■□□□□ 0.69
NUP98-201ENST00000324932 PPM1GO15355 546 aaPredicted RBP19.34■□□□□ 0.69
NUP98-201ENST00000324932 IRX6P78412 446 aaPredicted RBP19.33■□□□□ 0.69
NUP98-201ENST00000324932 CHGAP10645 457 aaKnown RBP19.29■□□□□ 0.68
NUP98-201ENST00000324932 PABPN1Q86U42 306 aaKnown RBP eCLIP19.27■□□□□ 0.68
NUP98-201ENST00000324932 PTMAP06454 111 aaKnown RBP19.26■□□□□ 0.67
NUP98-201ENST00000324932 ESF1Q9H501 851 aaKnown RBP19.25■□□□□ 0.67
NUP98-201ENST00000324932 STAG3Q9UJ98 1225 aa19.25■□□□□ 0.67
NUP98-201ENST00000324932 DNTTIP2Q5QJE6 756 aaKnown RBP19.2■□□□□ 0.66
NUP98-201ENST00000324932 NAP1L5Q96NT1 182 aaPredicted RBP19.2■□□□□ 0.66
NUP98-201ENST00000324932 EIF4G2P78344 907 aaKnown RBP eCLIP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms