RNA–Protein interactions for RNA: ENST00000587424.2

SRSF8-201, Transcript of serine and arginine rich splicing factor 8, humanhuman

APPRIS P1 BASIC

Gene SRSF8, Length 4,028 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF8-201ENST00000587424 NISCHQ9Y2I1 1504 aa26.97■■□□□ 1.91
SRSF8-201ENST00000587424 DCAF8L2P0C7V8 631 aa26.24■■□□□ 1.79
SRSF8-201ENST00000587424 SUPT5HO00267 1087 aaKnown RBP25.78■■□□□ 1.72
SRSF8-201ENST00000587424 SHROOM4Q9ULL8 1493 aa25.71■■□□□ 1.71
SRSF8-201ENST00000587424 EHMT2Q96KQ7 1210 aa24.76■■□□□ 1.55
SRSF8-201ENST00000587424 PCGF6Q9BYE7 350 aa24.39■■□□□ 1.49
SRSF8-201ENST00000587424 FAM9AQ8IZU1 332 aaPredicted RBP24.22■■□□□ 1.47
SRSF8-201ENST00000587424 TTBK1Q5TCY1 1321 aaPredicted RBP23.89■■□□□ 1.41
SRSF8-201ENST00000587424 LOC105371045A0A1W2PR82 267 aa23.73■■□□□ 1.39
SRSF8-201ENST00000587424 CHIC1Q5VXU3 224 aa23.69■■□□□ 1.38
SRSF8-201ENST00000587424 PPARGC1BQ86YN6 1023 aaKnown RBP23.61■■□□□ 1.37
SRSF8-201ENST00000587424 TRIM41Q8WV44 630 aa23.59■■□□□ 1.37
SRSF8-201ENST00000587424 HRCP23327 699 aa23.47■■□□□ 1.35
SRSF8-201ENST00000587424 RANGAP1P46060 587 aaPredicted RBP23.34■■□□□ 1.33
SRSF8-201ENST00000587424 CCER1Q8TC90 406 aaPredicted RBP23.17■■□□□ 1.3
SRSF8-201ENST00000587424 TRIM26Q12899 539 aaPredicted RBP23.13■■□□□ 1.29
SRSF8-201ENST00000587424 UBTFP17480 764 aaKnown RBP22.99■■□□□ 1.27
SRSF8-201ENST00000587424 APLP2Q06481 763 aa22.98■■□□□ 1.27
SRSF8-201ENST00000587424 ZEB1P37275 1124 aaPredicted RBP22.93■■□□□ 1.26
SRSF8-201ENST00000587424 YTHDC1Q96MU7 727 aaKnown RBP22.83■■□□□ 1.25
SRSF8-201ENST00000587424 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.78■■□□□ 1.24
SRSF8-201ENST00000587424 MYO15BQ96JP2 1530 aa22.63■■□□□ 1.21
SRSF8-201ENST00000587424 CENPBP07199 599 aaPredicted RBP22.61■■□□□ 1.21
SRSF8-201ENST00000587424 HNRNPUL2Q1KMD3 747 aaKnown RBP22.56■■□□□ 1.2
SRSF8-201ENST00000587424 ATP1B4Q9UN42 357 aaPredicted RBP22.55■■□□□ 1.2
SRSF8-201ENST00000587424 ABCC9O60706 1549 aa22.51■■□□□ 1.19
SRSF8-201ENST00000587424 ZCCHC6Q5VYS8 1495 aaKnown RBP22.5■■□□□ 1.19
SRSF8-201ENST00000587424 ITGAEP38570 1179 aa22.41■■□□□ 1.18
SRSF8-201ENST00000587424 PABPN1Q86U42 306 aaKnown RBP eCLIP22.38■■□□□ 1.17
SRSF8-201ENST00000587424 DIEXFQ68CQ4 756 aaKnown RBP22.27■■□□□ 1.15
SRSF8-201ENST00000587424 PELP1Q8IZL8 1130 aaKnown RBP22.19■■□□□ 1.14
SRSF8-201ENST00000587424 SCRIBQ14160 1630 aa22.07■■□□□ 1.12
SRSF8-201ENST00000587424 GTF3C3Q9Y5Q9 886 aa22.04■■□□□ 1.12
SRSF8-201ENST00000587424 DCAF1Q9Y4B6 1507 aa22.03■■□□□ 1.12
SRSF8-201ENST00000587424 CSRNP3Q8WYN3 585 aa21.88■■□□□ 1.09
SRSF8-201ENST00000587424 CNGB1Q14028 1251 aaPredicted RBP21.84■■□□□ 1.09
SRSF8-201ENST00000587424 RSF1Q96T23 1441 aaPredicted RBP21.83■■□□□ 1.08
SRSF8-201ENST00000587424 ACIN1Q9UKV3 1341 aaKnown RBP21.79■■□□□ 1.08
SRSF8-201ENST00000587424 SCAF1Q9H7N4 1312 aaKnown RBP21.79■■□□□ 1.08
SRSF8-201ENST00000587424 CCDC180Q9P1Z9 1646 aa21.77■■□□□ 1.08
SRSF8-201ENST00000587424 NEUROD1Q13562 356 aa21.76■■□□□ 1.07
SRSF8-201ENST00000587424 ZNF316A6NFI3 1004 aaPredicted RBP21.75■■□□□ 1.07
SRSF8-201ENST00000587424 NEFLP07196 543 aa21.7■■□□□ 1.06
SRSF8-201ENST00000587424 FAM50AQ14320 339 aaKnown RBP21.7■■□□□ 1.06
SRSF8-201ENST00000587424 BCANQ96GW7 911 aa21.66■■□□□ 1.06
SRSF8-201ENST00000587424 P3H3Q8IVL6 736 aa21.63■■□□□ 1.05
SRSF8-201ENST00000587424 POLR3GLQ9BT43 218 aa21.62■■□□□ 1.05
SRSF8-201ENST00000587424 CECR2Q9BXF3 1484 aa21.54■■□□□ 1.04
SRSF8-201ENST00000587424 ERICH6Q7L0X2 663 aa21.54■■□□□ 1.04
SRSF8-201ENST00000587424 MIER1Q8N108 512 aa21.46■■□□□ 1.03
SRSF8-201ENST00000587424 ARID3CA6NKF2 412 aa21.42■■□□□ 1.02
SRSF8-201ENST00000587424 RB1CC1Q8TDY2 1594 aa21.36■■□□□ 1.01
SRSF8-201ENST00000587424 CEP162Q5TB80 1403 aa21.33■■□□□ 1.01
SRSF8-201ENST00000587424 HIRIP3Q9BW71 556 aaPredicted RBP21.31■■□□□ 1
SRSF8-201ENST00000587424 TRIM52Q96A61 297 aa21.3■■□□□ 1
SRSF8-201ENST00000587424 SOGA1O94964 1423 aa21.24■□□□□ 0.99
SRSF8-201ENST00000587424 DDX10Q13206 875 aaKnown RBP21.23■□□□□ 0.99
SRSF8-201ENST00000587424 CLIP1P30622 1438 aa21.2■□□□□ 0.98
SRSF8-201ENST00000587424 MROH2BQ7Z745 1585 aa21.19■□□□□ 0.98
SRSF8-201ENST00000587424 ZNF326Q5BKZ1 582 aaKnown RBP21.17■□□□□ 0.98
SRSF8-201ENST00000587424 MYT1Q01538 1121 aa21.16■□□□□ 0.98
SRSF8-201ENST00000587424 ANP32CO43423 234 aa21.13■□□□□ 0.97
SRSF8-201ENST00000587424 ABCC8Q09428 1581 aa21.09■□□□□ 0.97
SRSF8-201ENST00000587424 CCDC88BA6NC98 1476 aa21.07■□□□□ 0.96
SRSF8-201ENST00000587424 FKBP8Q14318 412 aa21.07■□□□□ 0.96
SRSF8-201ENST00000587424 WRNQ14191 1432 aaPredicted RBP eCLIP21.06■□□□□ 0.96
SRSF8-201ENST00000587424 TNIKQ9UKE5 1360 aa21.04■□□□□ 0.96
SRSF8-201ENST00000587424 CHIC2Q9UKJ5 165 aa21■□□□□ 0.95
SRSF8-201ENST00000587424 GOLGA3Q08378 1498 aa20.99■□□□□ 0.95
SRSF8-201ENST00000587424 FBLN2P98095 1184 aa20.98■□□□□ 0.95
SRSF8-201ENST00000587424 MYT1LQ9UL68 1186 aa20.95■□□□□ 0.94
SRSF8-201ENST00000587424 WIZO95785 1651 aa20.91■□□□□ 0.94
SRSF8-201ENST00000587424 IRX6P78412 446 aaPredicted RBP20.91■□□□□ 0.94
SRSF8-201ENST00000587424 NACADO15069 1562 aa20.91■□□□□ 0.94
SRSF8-201ENST00000587424 SIN3AQ96ST3 1273 aa20.91■□□□□ 0.94
SRSF8-201ENST00000587424 SENP3-EIF4A1A0A087X0R7 540 aa20.9■□□□□ 0.94
SRSF8-201ENST00000587424 HNRNPUQ00839 825 aaKnown RBP eCLIP20.88■□□□□ 0.93
SRSF8-201ENST00000587424 KANK4Q5T7N3 995 aaPredicted RBP20.88■□□□□ 0.93
SRSF8-201ENST00000587424 ZNF777Q9ULD5 760 aaPredicted RBP20.87■□□□□ 0.93
SRSF8-201ENST00000587424 RUSC2Q8N2Y8 1516 aa20.86■□□□□ 0.93
SRSF8-201ENST00000587424 BAZ1AQ9NRL2 1556 aaPredicted RBP20.85■□□□□ 0.93
SRSF8-201ENST00000587424 TONSLQ96HA7 1378 aa20.84■□□□□ 0.93
SRSF8-201ENST00000587424 EEA1Q15075 1411 aa20.83■□□□□ 0.93
SRSF8-201ENST00000587424 FAM9BQ8IZU0 186 aa20.82■□□□□ 0.92
SRSF8-201ENST00000587424 CEP164Q9UPV0 1460 aa20.77■□□□□ 0.92
SRSF8-201ENST00000587424 RRP7BPQ9NSQ0 103 aa20.77■□□□□ 0.92
SRSF8-201ENST00000587424 CDK11AQ9UQ88 783 aaPredicted RBP20.75■□□□□ 0.91
SRSF8-201ENST00000587424 BAZ1BQ9UIG0 1483 aaKnown RBP20.74■□□□□ 0.91
SRSF8-201ENST00000587424 SALL2Q9Y467 1007 aaPredicted RBP20.73■□□□□ 0.91
SRSF8-201ENST00000587424 SLC4A1APQ9BWU0 796 aaKnown RBP20.7■□□□□ 0.9
SRSF8-201ENST00000587424 MTUS2Q5JR59 1369 aa20.65■□□□□ 0.9
SRSF8-201ENST00000587424 SUPT16HQ9Y5B9 1047 aaKnown RBP20.63■□□□□ 0.89
SRSF8-201ENST00000587424 KCNH8Q96L42 1107 aa20.62■□□□□ 0.89
SRSF8-201ENST00000587424 VPS8Q8N3P4 1428 aa20.61■□□□□ 0.89
SRSF8-201ENST00000587424 KIF27Q86VH2 1401 aa20.59■□□□□ 0.89
SRSF8-201ENST00000587424 DAXXQ9UER7 740 aaPredicted RBP20.58■□□□□ 0.88
SRSF8-201ENST00000587424 CCNB3Q8WWL7 1395 aa20.56■□□□□ 0.88
SRSF8-201ENST00000587424 MRS2Q9HD23 443 aa20.56■□□□□ 0.88
SRSF8-201ENST00000587424 RAPGEF2Q9Y4G8 1499 aa20.54■□□□□ 0.88
SRSF8-201ENST00000587424 KDM2AQ9Y2K7 1162 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 272.1 ms