RNA–Protein interactions for RNA: ENST00000637617.1

PXN-221, Transcript of paxillin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PXN, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-221ENST00000637617 NISCHQ9Y2I1 1504 aa29.39■■■□□ 2.3
PXN-221ENST00000637617 SHROOM4Q9ULL8 1493 aa25.89■■□□□ 1.74
PXN-221ENST00000637617 SUPT5HO00267 1087 aaKnown RBP25.69■■□□□ 1.7
PXN-221ENST00000637617 DCAF8L2P0C7V8 631 aa25.48■■□□□ 1.67
PXN-221ENST00000637617 HRCP23327 699 aa25.35■■□□□ 1.65
PXN-221ENST00000637617 MYO15BQ96JP2 1530 aa25.14■■□□□ 1.62
PXN-221ENST00000637617 CHIC1Q5VXU3 224 aa25.1■■□□□ 1.61
PXN-221ENST00000637617 PCGF6Q9BYE7 350 aa25.08■■□□□ 1.6
PXN-221ENST00000637617 ZCCHC6Q5VYS8 1495 aaKnown RBP24.93■■□□□ 1.58
PXN-221ENST00000637617 PPARGC1BQ86YN6 1023 aaKnown RBP24.91■■□□□ 1.58
PXN-221ENST00000637617 CCDC180Q9P1Z9 1646 aa24.6■■□□□ 1.53
PXN-221ENST00000637617 LOC105371045A0A1W2PR82 267 aa24.54■■□□□ 1.52
PXN-221ENST00000637617 DCAF1Q9Y4B6 1507 aa24.47■■□□□ 1.51
PXN-221ENST00000637617 TRIM26Q12899 539 aaPredicted RBP24.29■■□□□ 1.48
PXN-221ENST00000637617 ABCC9O60706 1549 aa24.13■■□□□ 1.45
PXN-221ENST00000637617 ZEB1P37275 1124 aaPredicted RBP23.95■■□□□ 1.43
PXN-221ENST00000637617 PELP1Q8IZL8 1130 aaKnown RBP23.87■■□□□ 1.41
PXN-221ENST00000637617 SCAF1Q9H7N4 1312 aaKnown RBP23.81■■□□□ 1.4
PXN-221ENST00000637617 FAM9AQ8IZU1 332 aaPredicted RBP23.78■■□□□ 1.4
PXN-221ENST00000637617 TRIM41Q8WV44 630 aa23.76■■□□□ 1.39
PXN-221ENST00000637617 EHMT2Q96KQ7 1210 aa23.71■■□□□ 1.39
PXN-221ENST00000637617 SCRIBQ14160 1630 aa23.65■■□□□ 1.38
PXN-221ENST00000637617 RSF1Q96T23 1441 aaPredicted RBP23.57■■□□□ 1.36
PXN-221ENST00000637617 RB1CC1Q8TDY2 1594 aa23.42■■□□□ 1.34
PXN-221ENST00000637617 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.37■■□□□ 1.33
PXN-221ENST00000637617 ACIN1Q9UKV3 1341 aaKnown RBP23.32■■□□□ 1.32
PXN-221ENST00000637617 NEUROD1Q13562 356 aa23.3■■□□□ 1.32
PXN-221ENST00000637617 CCER1Q8TC90 406 aaPredicted RBP23.3■■□□□ 1.32
PXN-221ENST00000637617 PABPN1Q86U42 306 aaKnown RBP eCLIP23.27■■□□□ 1.32
PXN-221ENST00000637617 GTF3C3Q9Y5Q9 886 aa23.15■■□□□ 1.3
PXN-221ENST00000637617 DIEXFQ68CQ4 756 aaKnown RBP23.14■■□□□ 1.3
PXN-221ENST00000637617 CECR2Q9BXF3 1484 aa23.11■■□□□ 1.29
PXN-221ENST00000637617 CENPBP07199 599 aaPredicted RBP23.08■■□□□ 1.29
PXN-221ENST00000637617 TTBK1Q5TCY1 1321 aaPredicted RBP23.07■■□□□ 1.28
PXN-221ENST00000637617 NACADO15069 1562 aa23.06■■□□□ 1.28
PXN-221ENST00000637617 MROH2BQ7Z745 1585 aa22.97■■□□□ 1.27
PXN-221ENST00000637617 WIZO95785 1651 aa22.87■■□□□ 1.25
PXN-221ENST00000637617 MYT1Q01538 1121 aa22.79■■□□□ 1.24
PXN-221ENST00000637617 YTHDC1Q96MU7 727 aaKnown RBP22.79■■□□□ 1.24
PXN-221ENST00000637617 ZNF316A6NFI3 1004 aaPredicted RBP22.76■■□□□ 1.23
PXN-221ENST00000637617 WRNQ14191 1432 aaPredicted RBP eCLIP22.72■■□□□ 1.23
PXN-221ENST00000637617 CEP162Q5TB80 1403 aa22.72■■□□□ 1.23
PXN-221ENST00000637617 CCDC88BA6NC98 1476 aa22.66■■□□□ 1.22
PXN-221ENST00000637617 EIF4G1Q04637 1599 aaKnown RBP22.66■■□□□ 1.22
PXN-221ENST00000637617 ABCC8Q09428 1581 aa22.66■■□□□ 1.22
PXN-221ENST00000637617 BAZ1AQ9NRL2 1556 aaPredicted RBP22.64■■□□□ 1.22
PXN-221ENST00000637617 UBTFP17480 764 aaKnown RBP22.61■■□□□ 1.21
PXN-221ENST00000637617 MIER1Q8N108 512 aa22.59■■□□□ 1.21
PXN-221ENST00000637617 SOGA1O94964 1423 aa22.59■■□□□ 1.21
PXN-221ENST00000637617 TNIKQ9UKE5 1360 aa22.57■■□□□ 1.2
PXN-221ENST00000637617 HNRNPUL2Q1KMD3 747 aaKnown RBP22.52■■□□□ 1.2
PXN-221ENST00000637617 CSRNP3Q8WYN3 585 aa22.51■■□□□ 1.19
PXN-221ENST00000637617 UNC13AQ9UPW8 1703 aa22.49■■□□□ 1.19
PXN-221ENST00000637617 RUSC2Q8N2Y8 1516 aa22.46■■□□□ 1.19
PXN-221ENST00000637617 TOP2AP11388 1531 aaKnown RBP22.4■■□□□ 1.18
PXN-221ENST00000637617 EEA1Q15075 1411 aa22.35■■□□□ 1.17
PXN-221ENST00000637617 SMARCA2P51531 1590 aa22.34■■□□□ 1.17
PXN-221ENST00000637617 BICRAQ9NZM4 1560 aa22.33■■□□□ 1.17
PXN-221ENST00000637617 GOLGA3Q08378 1498 aa22.33■■□□□ 1.16
PXN-221ENST00000637617 SMARCA4P51532 1647 aa22.27■■□□□ 1.16
PXN-221ENST00000637617 APLP2Q06481 763 aa22.19■■□□□ 1.14
PXN-221ENST00000637617 RANGAP1P46060 587 aaPredicted RBP22.19■■□□□ 1.14
PXN-221ENST00000637617 CLIP1P30622 1438 aa22.18■■□□□ 1.14
PXN-221ENST00000637617 CEP164Q9UPV0 1460 aa22.12■■□□□ 1.13
PXN-221ENST00000637617 VPS8Q8N3P4 1428 aa22.09■■□□□ 1.13
PXN-221ENST00000637617 SUPT16HQ9Y5B9 1047 aaKnown RBP22.09■■□□□ 1.13
PXN-221ENST00000637617 KIF21BO75037 1637 aa22.01■■□□□ 1.11
PXN-221ENST00000637617 SYNJ1O43426 1573 aa21.97■■□□□ 1.11
PXN-221ENST00000637617 CLSPNQ9HAW4 1339 aa21.97■■□□□ 1.11
PXN-221ENST00000637617 RAPGEF2Q9Y4G8 1499 aa21.97■■□□□ 1.11
PXN-221ENST00000637617 DHX57Q6P158 1386 aaKnown RBP21.96■■□□□ 1.11
PXN-221ENST00000637617 ATAD2BQ9ULI0 1458 aa21.95■■□□□ 1.1
PXN-221ENST00000637617 BAZ1BQ9UIG0 1483 aaKnown RBP21.95■■□□□ 1.1
PXN-221ENST00000637617 TSHZ2Q9NRE2 1034 aa21.9■■□□□ 1.1
PXN-221ENST00000637617 KANK4Q5T7N3 995 aaPredicted RBP21.83■■□□□ 1.09
PXN-221ENST00000637617 KCNH8Q96L42 1107 aa21.8■■□□□ 1.08
PXN-221ENST00000637617 ANP32EQ9BTT0 268 aa21.76■■□□□ 1.07
PXN-221ENST00000637617 BCANQ96GW7 911 aa21.75■■□□□ 1.07
PXN-221ENST00000637617 ITGAEP38570 1179 aa21.74■■□□□ 1.07
PXN-221ENST00000637617 ARAP1Q96P48 1450 aa21.68■■□□□ 1.06
PXN-221ENST00000637617 DNAJC5BQ9UF47 199 aa21.66■■□□□ 1.06
PXN-221ENST00000637617 PEG3Q9GZU2 1588 aa21.65■■□□□ 1.06
PXN-221ENST00000637617 RRBP1Q9P2E9 1410 aaKnown RBP21.63■■□□□ 1.05
PXN-221ENST00000637617 FKBP8Q14318 412 aa21.63■■□□□ 1.05
PXN-221ENST00000637617 CCNB3Q8WWL7 1395 aa21.6■■□□□ 1.05
PXN-221ENST00000637617 DDX10Q13206 875 aaKnown RBP21.57■■□□□ 1.04
PXN-221ENST00000637617 PRXQ9BXM0 1461 aa21.57■■□□□ 1.04
PXN-221ENST00000637617 TOP2BQ02880 1626 aa21.57■■□□□ 1.04
PXN-221ENST00000637617 ERICH3Q5RHP9 1530 aa21.54■■□□□ 1.04
PXN-221ENST00000637617 CUX2O14529 1486 aa21.54■■□□□ 1.04
PXN-221ENST00000637617 RAB3GAP2Q9H2M9 1393 aa21.53■■□□□ 1.04
PXN-221ENST00000637617 BCL11AQ9H165 835 aa21.48■■□□□ 1.03
PXN-221ENST00000637617 NCAPD3P42695 1498 aa21.47■■□□□ 1.03
PXN-221ENST00000637617 SIN3AQ96ST3 1273 aa21.47■■□□□ 1.03
PXN-221ENST00000637617 MAPKBP1O60336 1514 aa21.46■■□□□ 1.03
PXN-221ENST00000637617 NEFLP07196 543 aa21.45■■□□□ 1.02
PXN-221ENST00000637617 HIRIP3Q9BW71 556 aaPredicted RBP21.44■■□□□ 1.02
PXN-221ENST00000637617 TRIM52Q96A61 297 aa21.44■■□□□ 1.02
PXN-221ENST00000637617 RBM19Q9Y4C8 960 aaKnown RBP21.44■■□□□ 1.02
PXN-221ENST00000637617 BIVM-ERCC5R4GMW8 1640 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms