Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC12.79□□□□□ -0.36
ZNF253O75346 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
ZNF253O75346 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZNF253O75346 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZNF253O75346 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
ZNF253O75346 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC12.79□□□□□ -0.36
ZNF253O75346 GGT3P-204ENST00000453783 1664 ntBASIC12.79□□□□□ -0.36
ZNF253O75346 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC12.79□□□□□ -0.36
ZNF253O75346 HLA-DQB2-231ENST00000435145 2026 ntBASIC12.79□□□□□ -0.36
ZNF253O75346 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZNF253O75346 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZNF253O75346 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZNF253O75346 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
ZNF253O75346 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC12.79□□□□□ -0.36
ZNF253O75346 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZNF253O75346 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC12.79□□□□□ -0.36
ZNF253O75346 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ZNF253O75346 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
ZNF253O75346 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZNF253O75346 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF253O75346 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC12.78□□□□□ -0.36
ZNF253O75346 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
ZNF253O75346 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF253O75346 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF253O75346 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF253O75346 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC12.78□□□□□ -0.36
ZNF253O75346 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
ZNF253O75346 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
ZNF253O75346 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC12.78□□□□□ -0.36
ZNF253O75346 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
ZNF253O75346 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF253O75346 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF253O75346 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF253O75346 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF253O75346 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF253O75346 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF253O75346 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF253O75346 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF253O75346 BET1L-202ENST00000332865 533 ntTSL 5 BASIC12.78□□□□□ -0.36
ZNF253O75346 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF253O75346 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
ZNF253O75346 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF253O75346 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF253O75346 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC12.78□□□□□ -0.36
ZNF253O75346 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC12.78□□□□□ -0.36
ZNF253O75346 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.36
ZNF253O75346 AC074051.2-201ENST00000565115 352 ntBASIC12.78□□□□□ -0.36
ZNF253O75346 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC12.78□□□□□ -0.36
ZNF253O75346 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC12.78□□□□□ -0.36
ZNF253O75346 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC12.78□□□□□ -0.36
ZNF253O75346 CCNC-219ENST00000627680 896 ntTSL 5 BASIC12.78□□□□□ -0.36
ZNF253O75346 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF253O75346 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC12.78□□□□□ -0.36
ZNF253O75346 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
ZNF253O75346 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF253O75346 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC12.78□□□□□ -0.36
ZNF253O75346 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF253O75346 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF253O75346 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF253O75346 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF253O75346 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF253O75346 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF253O75346 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF253O75346 ALOX12P2-203ENST00000570921 1945 ntBASIC12.78□□□□□ -0.36
ZNF253O75346 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC12.78□□□□□ -0.36
ZNF253O75346 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF253O75346 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC12.78□□□□□ -0.36
ZNF253O75346 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC12.78□□□□□ -0.36
ZNF253O75346 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF253O75346 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
ZNF253O75346 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
ZNF253O75346 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
ZNF253O75346 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ZNF253O75346 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC12.77□□□□□ -0.36
ZNF253O75346 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC12.77□□□□□ -0.36
ZNF253O75346 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
ZNF253O75346 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
ZNF253O75346 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ZNF253O75346 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ZNF253O75346 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ZNF253O75346 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC12.77□□□□□ -0.36
ZNF253O75346 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
ZNF253O75346 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
ZNF253O75346 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC12.77□□□□□ -0.36
ZNF253O75346 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC12.77□□□□□ -0.36
ZNF253O75346 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC12.77□□□□□ -0.36
ZNF253O75346 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ZNF253O75346 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ZNF253O75346 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
ZNF253O75346 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ZNF253O75346 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
ZNF253O75346 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ZNF253O75346 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ZNF253O75346 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ZNF253O75346 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ZNF253O75346 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ZNF253O75346 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC12.77□□□□□ -0.37
ZNF253O75346 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
ZNF253O75346 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ZNF253O75346 NME3-204ENST00000563498 920 ntTSL 2 BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms