RNA–Protein interactions for RNA: ENST00000396925.1

CLDN6-202, Transcript of claudin 6, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLDN6, Length 1,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6-202ENST00000396925 NISCHQ9Y2I1 1504 aa43.14■■■■■ 4.5
CLDN6-202ENST00000396925 CCDC180Q9P1Z9 1646 aa38.35■■■■□ 3.73
CLDN6-202ENST00000396925 ABCC9O60706 1549 aa37.71■■■■□ 3.63
CLDN6-202ENST00000396925 DCAF8L2P0C7V8 631 aa36.22■■■■□ 3.39
CLDN6-202ENST00000396925 RB1CC1Q8TDY2 1594 aa36.18■■■■□ 3.38
CLDN6-202ENST00000396925 NACADO15069 1562 aa36.09■■■■□ 3.37
CLDN6-202ENST00000396925 ZCCHC6Q5VYS8 1495 aaKnown RBP35.92■■■■□ 3.34
CLDN6-202ENST00000396925 MYO15BQ96JP2 1530 aa35.8■■■■□ 3.32
CLDN6-202ENST00000396925 DCAF1Q9Y4B6 1507 aa35.63■■■■□ 3.29
CLDN6-202ENST00000396925 UNC13AQ9UPW8 1703 aa35.34■■■■□ 3.25
CLDN6-202ENST00000396925 PABPN1Q86U42 306 aaKnown RBP eCLIP35.25■■■■□ 3.23
CLDN6-202ENST00000396925 SCRIBQ14160 1630 aa35.09■■■■□ 3.21
CLDN6-202ENST00000396925 BICRAQ9NZM4 1560 aa35.07■■■■□ 3.2
CLDN6-202ENST00000396925 DNAJC5BQ9UF47 199 aa34.66■■■■□ 3.14
CLDN6-202ENST00000396925 SHROOM4Q9ULL8 1493 aa34.65■■■■□ 3.14
CLDN6-202ENST00000396925 EIF4G1Q04637 1599 aaKnown RBP34.18■■■■□ 3.06
CLDN6-202ENST00000396925 CC2D2AQ9P2K1 1620 aa34.07■■■■□ 3.04
CLDN6-202ENST00000396925 CECR2Q9BXF3 1484 aa33.87■■■■□ 3.01
CLDN6-202ENST00000396925 SMARCA4P51532 1647 aa33.5■■■□□ 2.95
CLDN6-202ENST00000396925 BAZ1AQ9NRL2 1556 aaPredicted RBP33.45■■■□□ 2.94
CLDN6-202ENST00000396925 ATAD2BQ9ULI0 1458 aa33.34■■■□□ 2.93
CLDN6-202ENST00000396925 NCAPD3P42695 1498 aa33.3■■■□□ 2.92
CLDN6-202ENST00000396925 SMARCA2P51531 1590 aa33.29■■■□□ 2.92
CLDN6-202ENST00000396925 MROH2BQ7Z745 1585 aa33.27■■■□□ 2.92
CLDN6-202ENST00000396925 HMGXB3Q12766 1538 aa33.14■■■□□ 2.89
CLDN6-202ENST00000396925 PEG3Q9GZU2 1588 aa33.12■■■□□ 2.89
CLDN6-202ENST00000396925 BAZ1BQ9UIG0 1483 aaKnown RBP33.09■■■□□ 2.89
CLDN6-202ENST00000396925 WIZO95785 1651 aa32.92■■■□□ 2.86
CLDN6-202ENST00000396925 RSF1Q96T23 1441 aaPredicted RBP32.85■■■□□ 2.85
CLDN6-202ENST00000396925 NESP48681 1621 aa32.6■■■□□ 2.81
CLDN6-202ENST00000396925 TOP2AP11388 1531 aaKnown RBP32.54■■■□□ 2.8
CLDN6-202ENST00000396925 ERCC6Q03468 1493 aa32.52■■■□□ 2.8
CLDN6-202ENST00000396925 LAMC3Q9Y6N6 1575 aa32.45■■■□□ 2.79
CLDN6-202ENST00000396925 CADPSQ9ULU8 1353 aa32.36■■■□□ 2.77
CLDN6-202ENST00000396925 PDS5BQ9NTI5 1447 aa32.26■■■□□ 2.75
CLDN6-202ENST00000396925 KIF21AQ7Z4S6 1674 aa32.19■■■□□ 2.74
CLDN6-202ENST00000396925 CCDC88BA6NC98 1476 aa32.17■■■□□ 2.74
CLDN6-202ENST00000396925 CFTRP13569 1480 aa32.14■■■□□ 2.74
CLDN6-202ENST00000396925 CUX2O14529 1486 aa32.13■■■□□ 2.73
CLDN6-202ENST00000396925 THOC2Q8NI27 1593 aaKnown RBP32.08■■■□□ 2.73
CLDN6-202ENST00000396925 SUPT5HO00267 1087 aaKnown RBP32.08■■■□□ 2.73
CLDN6-202ENST00000396925 FANCD2Q9BXW9 1451 aa32.01■■■□□ 2.71
CLDN6-202ENST00000396925 CEP164Q9UPV0 1460 aa31.98■■■□□ 2.71
CLDN6-202ENST00000396925 MRC2Q9UBG0 1479 aa31.93■■■□□ 2.7
CLDN6-202ENST00000396925 PRDM2Q13029 1718 aa31.86■■■□□ 2.69
CLDN6-202ENST00000396925 WDR62O43379 1518 aa31.81■■■□□ 2.68
CLDN6-202ENST00000396925 URB2Q14146 1524 aaKnown RBP31.68■■■□□ 2.66
CLDN6-202ENST00000396925 TOPBP1Q92547 1522 aa31.48■■■□□ 2.63
CLDN6-202ENST00000396925 ABCC8Q09428 1581 aa31.43■■■□□ 2.62
CLDN6-202ENST00000396925 DNMBPQ6XZF7 1577 aa31.43■■■□□ 2.62
CLDN6-202ENST00000396925 IFT140Q96RY7 1462 aa31.29■■■□□ 2.6
CLDN6-202ENST00000396925 DNAJC5Q9H3Z4 198 aa31.26■■■□□ 2.59
CLDN6-202ENST00000396925 POLA1P09884 1462 aaPredicted RBP31.22■■■□□ 2.59
CLDN6-202ENST00000396925 CUX1P39880 1505 aa31.21■■■□□ 2.59
CLDN6-202ENST00000396925 ZNF608Q9ULD9 1512 aaPredicted RBP31.19■■■□□ 2.58
CLDN6-202ENST00000396925 FGD5Q6ZNL6 1462 aa31.14■■■□□ 2.58
CLDN6-202ENST00000396925 TARBP1Q13395 1621 aaKnown RBP31.12■■■□□ 2.57
CLDN6-202ENST00000396925 RAD54L2Q9Y4B4 1467 aa31.11■■■□□ 2.57
CLDN6-202ENST00000396925 SOGA1O94964 1423 aa31.09■■■□□ 2.57
CLDN6-202ENST00000396925 EIF4G3O43432 1585 aaKnown RBP31.05■■■□□ 2.56
CLDN6-202ENST00000396925 AQRO60306 1485 aaKnown RBP eCLIP31.01■■■□□ 2.56
CLDN6-202ENST00000396925 WRNQ14191 1432 aaPredicted RBP eCLIP31■■■□□ 2.55
CLDN6-202ENST00000396925 TDRD9Q8NDG6 1382 aaKnown RBP30.96■■■□□ 2.55
CLDN6-202ENST00000396925 SYNJ1O43426 1573 aa30.92■■■□□ 2.54
CLDN6-202ENST00000396925 TOP2BQ02880 1626 aa30.9■■■□□ 2.54
CLDN6-202ENST00000396925 BIVM-ERCC5R4GMW8 1640 aa30.89■■■□□ 2.54
CLDN6-202ENST00000396925 WDR97A6NE52 1622 aa30.84■■■□□ 2.53
CLDN6-202ENST00000396925 OSCARQ8IYS5 282 aa30.83■■■□□ 2.53
CLDN6-202ENST00000396925 ABCA10Q8WWZ4 1543 aa30.8■■■□□ 2.52
CLDN6-202ENST00000396925 GAPVD1Q14C86 1478 aa30.73■■■□□ 2.51
CLDN6-202ENST00000396925 FBLN2P98095 1184 aa30.73■■■□□ 2.51
CLDN6-202ENST00000396925 GRIN2BQ13224 1484 aa30.73■■■□□ 2.51
CLDN6-202ENST00000396925 SNAPC4Q5SXM2 1469 aa30.73■■■□□ 2.51
CLDN6-202ENST00000396925 ABCA5Q8WWZ7 1642 aa30.68■■■□□ 2.5
CLDN6-202ENST00000396925 CHD1O14646 1710 aa30.67■■■□□ 2.5
CLDN6-202ENST00000396925 PBRM1Q86U86 1689 aa30.66■■■□□ 2.5
CLDN6-202ENST00000396925 MAGI1Q96QZ7 1491 aaPredicted RBP30.64■■■□□ 2.5
CLDN6-202ENST00000396925 CHMP7Q8WUX9 453 aaPredicted RBP30.58■■■□□ 2.49
CLDN6-202ENST00000396925 SYNJ2O15056 1496 aa30.53■■■□□ 2.48
CLDN6-202ENST00000396925 ERICH3Q5RHP9 1530 aa30.42■■■□□ 2.46
CLDN6-202ENST00000396925 ADAMTS12P58397 1594 aa30.41■■■□□ 2.46
CLDN6-202ENST00000396925 FHAD1B1AJZ9 1412 aa30.35■■■□□ 2.45
CLDN6-202ENST00000396925 KIF27Q86VH2 1401 aa30.35■■■□□ 2.45
CLDN6-202ENST00000396925 RIMBP3CA6NJZ7 1639 aa30.33■■■□□ 2.45
CLDN6-202ENST00000396925 RIMBP3BA6NNM3 1639 aa30.33■■■□□ 2.45
CLDN6-202ENST00000396925 RIMBP3Q9UFD9 1639 aa30.33■■■□□ 2.45
CLDN6-202ENST00000396925 ARHGEF11O15085 1522 aa30.33■■■□□ 2.45
CLDN6-202ENST00000396925 GRIN2AQ12879 1464 aa30.33■■■□□ 2.45
CLDN6-202ENST00000396925 TRIM41Q8WV44 630 aa30.31■■■□□ 2.44
CLDN6-202ENST00000396925 CLASP1Q7Z460 1538 aa30.31■■■□□ 2.44
CLDN6-202ENST00000396925 IGF1RP08069 1367 aa30.23■■■□□ 2.43
CLDN6-202ENST00000396925 CEP170Q5SW79 1584 aa30.19■■■□□ 2.42
CLDN6-202ENST00000396925 NUP160Q12769 1436 aa30.18■■■□□ 2.42
CLDN6-202ENST00000396925 CUL7Q14999 1698 aa30.13■■■□□ 2.41
CLDN6-202ENST00000396925 CYB5RLQ6IPT4 315 aa30.1■■■□□ 2.41
CLDN6-202ENST00000396925 RUSC2Q8N2Y8 1516 aa30.08■■■□□ 2.41
CLDN6-202ENST00000396925 ARAP1Q96P48 1450 aa30.07■■■□□ 2.4
CLDN6-202ENST00000396925 CARMIL1Q5VZK9 1371 aa30.07■■■□□ 2.4
CLDN6-202ENST00000396925 SHROOM2Q13796 1616 aa29.94■■■□□ 2.38
CLDN6-202ENST00000396925 ERCC6L2Q5T890 1561 aa29.94■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms