RNA–Protein interactions for RNA: ENST00000219070.8

MMP2-201, Transcript of matrix metallopeptidase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP2, Length 3,741 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2-201ENST00000219070 NISCHQ9Y2I1 1504 aa32.78■■■□□ 2.84
MMP2-201ENST00000219070 DCAF8L2P0C7V8 631 aa29.72■■■□□ 2.35
MMP2-201ENST00000219070 SHROOM4Q9ULL8 1493 aa29.18■■■□□ 2.26
MMP2-201ENST00000219070 SUPT5HO00267 1087 aaKnown RBP28.57■■■□□ 2.16
MMP2-201ENST00000219070 ABCC9O60706 1549 aa27.52■■■□□ 2
MMP2-201ENST00000219070 CCDC180Q9P1Z9 1646 aa27.48■■□□□ 1.99
MMP2-201ENST00000219070 ZCCHC6Q5VYS8 1495 aaKnown RBP27.41■■□□□ 1.98
MMP2-201ENST00000219070 EHMT2Q96KQ7 1210 aa27.01■■□□□ 1.91
MMP2-201ENST00000219070 SCRIBQ14160 1630 aa26.74■■□□□ 1.87
MMP2-201ENST00000219070 PABPN1Q86U42 306 aaKnown RBP eCLIP26.69■■□□□ 1.86
MMP2-201ENST00000219070 FAM9AQ8IZU1 332 aaPredicted RBP26.69■■□□□ 1.86
MMP2-201ENST00000219070 CHIC1Q5VXU3 224 aa26.6■■□□□ 1.85
MMP2-201ENST00000219070 TRIM41Q8WV44 630 aa26.32■■□□□ 1.8
MMP2-201ENST00000219070 LOC105371045A0A1W2PR82 267 aa26.32■■□□□ 1.8
MMP2-201ENST00000219070 DCAF1Q9Y4B6 1507 aa26.24■■□□□ 1.79
MMP2-201ENST00000219070 CECR2Q9BXF3 1484 aa26.01■■□□□ 1.75
MMP2-201ENST00000219070 RSF1Q96T23 1441 aaPredicted RBP25.98■■□□□ 1.75
MMP2-201ENST00000219070 NACADO15069 1562 aa25.98■■□□□ 1.75
MMP2-201ENST00000219070 PCGF6Q9BYE7 350 aa25.94■■□□□ 1.74
MMP2-201ENST00000219070 RB1CC1Q8TDY2 1594 aa25.92■■□□□ 1.74
MMP2-201ENST00000219070 MYO15BQ96JP2 1530 aa25.88■■□□□ 1.73
MMP2-201ENST00000219070 TTBK1Q5TCY1 1321 aaPredicted RBP25.88■■□□□ 1.73
MMP2-201ENST00000219070 PELP1Q8IZL8 1130 aaKnown RBP25.8■■□□□ 1.72
MMP2-201ENST00000219070 PPARGC1BQ86YN6 1023 aaKnown RBP25.79■■□□□ 1.72
MMP2-201ENST00000219070 RANGAP1P46060 587 aaPredicted RBP25.78■■□□□ 1.72
MMP2-201ENST00000219070 MROH2BQ7Z745 1585 aa25.66■■□□□ 1.7
MMP2-201ENST00000219070 UBTFP17480 764 aaKnown RBP25.48■■□□□ 1.67
MMP2-201ENST00000219070 WIZO95785 1651 aa25.43■■□□□ 1.66
MMP2-201ENST00000219070 BAZ1AQ9NRL2 1556 aaPredicted RBP25.28■■□□□ 1.64
MMP2-201ENST00000219070 MYT1Q01538 1121 aa25.26■■□□□ 1.63
MMP2-201ENST00000219070 CCDC88BA6NC98 1476 aa25.06■■□□□ 1.6
MMP2-201ENST00000219070 TRIM26Q12899 539 aaPredicted RBP25.01■■□□□ 1.59
MMP2-201ENST00000219070 ABCC8Q09428 1581 aa25.01■■□□□ 1.59
MMP2-201ENST00000219070 SMARCA4P51532 1647 aa24.99■■□□□ 1.59
MMP2-201ENST00000219070 BAZ1BQ9UIG0 1483 aaKnown RBP24.96■■□□□ 1.59
MMP2-201ENST00000219070 APLP2Q06481 763 aa24.93■■□□□ 1.58
MMP2-201ENST00000219070 CSRNP3Q8WYN3 585 aa24.92■■□□□ 1.58
MMP2-201ENST00000219070 UNC13AQ9UPW8 1703 aa24.89■■□□□ 1.57
MMP2-201ENST00000219070 ATP1B4Q9UN42 357 aaPredicted RBP24.88■■□□□ 1.57
MMP2-201ENST00000219070 BICRAQ9NZM4 1560 aa24.85■■□□□ 1.57
MMP2-201ENST00000219070 HRCP23327 699 aa24.83■■□□□ 1.57
MMP2-201ENST00000219070 TOP2AP11388 1531 aaKnown RBP24.81■■□□□ 1.56
MMP2-201ENST00000219070 SOGA1O94964 1423 aa24.79■■□□□ 1.56
MMP2-201ENST00000219070 ATAD2BQ9ULI0 1458 aa24.76■■□□□ 1.55
MMP2-201ENST00000219070 WRNQ14191 1432 aaPredicted RBP eCLIP24.71■■□□□ 1.55
MMP2-201ENST00000219070 CCER1Q8TC90 406 aaPredicted RBP24.69■■□□□ 1.54
MMP2-201ENST00000219070 SMARCA2P51531 1590 aa24.66■■□□□ 1.54
MMP2-201ENST00000219070 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.65■■□□□ 1.54
MMP2-201ENST00000219070 HNRNPUL2Q1KMD3 747 aaKnown RBP24.62■■□□□ 1.53
MMP2-201ENST00000219070 RUSC2Q8N2Y8 1516 aa24.61■■□□□ 1.53
MMP2-201ENST00000219070 P3H3Q8IVL6 736 aa24.54■■□□□ 1.52
MMP2-201ENST00000219070 ITGAEP38570 1179 aa24.53■■□□□ 1.52
MMP2-201ENST00000219070 EIF4G1Q04637 1599 aaKnown RBP24.44■■□□□ 1.5
MMP2-201ENST00000219070 DNAJC5BQ9UF47 199 aa24.4■■□□□ 1.5
MMP2-201ENST00000219070 CEP162Q5TB80 1403 aa24.39■■□□□ 1.49
MMP2-201ENST00000219070 ARID3CA6NKF2 412 aa24.24■■□□□ 1.47
MMP2-201ENST00000219070 GOLGA3Q08378 1498 aa24.21■■□□□ 1.47
MMP2-201ENST00000219070 CLIP1P30622 1438 aa24.21■■□□□ 1.47
MMP2-201ENST00000219070 NCAPD3P42695 1498 aa24.19■■□□□ 1.46
MMP2-201ENST00000219070 TNIKQ9UKE5 1360 aa24.18■■□□□ 1.46
MMP2-201ENST00000219070 ZEB1P37275 1124 aaPredicted RBP24.18■■□□□ 1.46
MMP2-201ENST00000219070 FBLN2P98095 1184 aa24.17■■□□□ 1.46
MMP2-201ENST00000219070 SYNJ1O43426 1573 aa24.16■■□□□ 1.46
MMP2-201ENST00000219070 EEA1Q15075 1411 aa24.14■■□□□ 1.46
MMP2-201ENST00000219070 CADPSQ9ULU8 1353 aa24.12■■□□□ 1.45
MMP2-201ENST00000219070 RAPGEF2Q9Y4G8 1499 aa24.09■■□□□ 1.45
MMP2-201ENST00000219070 CUX2O14529 1486 aa24.08■■□□□ 1.45
MMP2-201ENST00000219070 CEP164Q9UPV0 1460 aa24.08■■□□□ 1.45
MMP2-201ENST00000219070 CC2D2AQ9P2K1 1620 aa24.07■■□□□ 1.44
MMP2-201ENST00000219070 KIF27Q86VH2 1401 aa24.07■■□□□ 1.44
MMP2-201ENST00000219070 NESP48681 1621 aa24.05■■□□□ 1.44
MMP2-201ENST00000219070 FAM50AQ14320 339 aaKnown RBP24.02■■□□□ 1.44
MMP2-201ENST00000219070 PEG3Q9GZU2 1588 aa23.98■■□□□ 1.43
MMP2-201ENST00000219070 TDRD9Q8NDG6 1382 aaKnown RBP23.96■■□□□ 1.43
MMP2-201ENST00000219070 FANCD2Q9BXW9 1451 aa23.9■■□□□ 1.42
MMP2-201ENST00000219070 CFTRP13569 1480 aa23.89■■□□□ 1.41
MMP2-201ENST00000219070 CARMIL1Q5VZK9 1371 aa23.87■■□□□ 1.41
MMP2-201ENST00000219070 KANK4Q5T7N3 995 aaPredicted RBP23.87■■□□□ 1.41
MMP2-201ENST00000219070 HMGXB3Q12766 1538 aa23.86■■□□□ 1.41
MMP2-201ENST00000219070 RAD54L2Q9Y4B4 1467 aa23.85■■□□□ 1.41
MMP2-201ENST00000219070 CUX1P39880 1505 aa23.84■■□□□ 1.41
MMP2-201ENST00000219070 SCAF1Q9H7N4 1312 aaKnown RBP23.84■■□□□ 1.41
MMP2-201ENST00000219070 FGD5Q6ZNL6 1462 aa23.8■■□□□ 1.4
MMP2-201ENST00000219070 IGF1RP08069 1367 aa23.71■■□□□ 1.39
MMP2-201ENST00000219070 VPS8Q8N3P4 1428 aa23.7■■□□□ 1.39
MMP2-201ENST00000219070 TOP2BQ02880 1626 aa23.7■■□□□ 1.38
MMP2-201ENST00000219070 YTHDC1Q96MU7 727 aaKnown RBP23.69■■□□□ 1.38
MMP2-201ENST00000219070 PDS5BQ9NTI5 1447 aa23.66■■□□□ 1.38
MMP2-201ENST00000219070 NEUROD1Q13562 356 aa23.66■■□□□ 1.38
MMP2-201ENST00000219070 ERCC6Q03468 1493 aa23.65■■□□□ 1.38
MMP2-201ENST00000219070 CHMP7Q8WUX9 453 aaPredicted RBP23.59■■□□□ 1.37
MMP2-201ENST00000219070 DIEXFQ68CQ4 756 aaKnown RBP23.54■■□□□ 1.36
MMP2-201ENST00000219070 CHIC2Q9UKJ5 165 aa23.54■■□□□ 1.36
MMP2-201ENST00000219070 FHOD3Q2V2M9 1422 aa23.54■■□□□ 1.36
MMP2-201ENST00000219070 PRXQ9BXM0 1461 aa23.49■■□□□ 1.35
MMP2-201ENST00000219070 KIF21BO75037 1637 aa23.49■■□□□ 1.35
MMP2-201ENST00000219070 POLA1P09884 1462 aaPredicted RBP23.48■■□□□ 1.35
MMP2-201ENST00000219070 TOPBP1Q92547 1522 aa23.48■■□□□ 1.35
MMP2-201ENST00000219070 ZNF777Q9ULD5 760 aaPredicted RBP23.47■■□□□ 1.35
MMP2-201ENST00000219070 ARAP1Q96P48 1450 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms