RNA–Protein interactions for RNA: ENST00000306901.8

CHRNA7-201, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHRNA7, Length 6,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-201ENST00000306901 DCAF8L2P0C7V8 631 aa24.08■■□□□ 1.44
CHRNA7-201ENST00000306901 SUPT5HO00267 1087 aaKnown RBP23.21■■□□□ 1.31
CHRNA7-201ENST00000306901 EHMT2Q96KQ7 1210 aa23.14■■□□□ 1.3
CHRNA7-201ENST00000306901 PELP1Q8IZL8 1130 aaKnown RBP23.1■■□□□ 1.29
CHRNA7-201ENST00000306901 SHROOM4Q9ULL8 1493 aa22.58■■□□□ 1.2
CHRNA7-201ENST00000306901 ERICH6Q7L0X2 663 aa22.53■■□□□ 1.2
CHRNA7-201ENST00000306901 TTBK1Q5TCY1 1321 aaPredicted RBP22.42■■□□□ 1.18
CHRNA7-201ENST00000306901 PCGF6Q9BYE7 350 aa22.32■■□□□ 1.16
CHRNA7-201ENST00000306901 CENPBP07199 599 aaPredicted RBP22.15■■□□□ 1.14
CHRNA7-201ENST00000306901 APLP2Q06481 763 aa22.13■■□□□ 1.13
CHRNA7-201ENST00000306901 FAM9AQ8IZU1 332 aaPredicted RBP22.09■■□□□ 1.13
CHRNA7-201ENST00000306901 CCER1Q8TC90 406 aaPredicted RBP22.05■■□□□ 1.12
CHRNA7-201ENST00000306901 YTHDC1Q96MU7 727 aaKnown RBP22.01■■□□□ 1.11
CHRNA7-201ENST00000306901 MYT1Q01538 1121 aa21.97■■□□□ 1.11
CHRNA7-201ENST00000306901 RANGAP1P46060 587 aaPredicted RBP21.81■■□□□ 1.08
CHRNA7-201ENST00000306901 NEFLP07196 543 aa21.68■■□□□ 1.06
CHRNA7-201ENST00000306901 ZEB1P37275 1124 aaPredicted RBP21.66■■□□□ 1.06
CHRNA7-201ENST00000306901 ATP1B4Q9UN42 357 aaPredicted RBP21.48■■□□□ 1.03
CHRNA7-201ENST00000306901 PPARGC1BQ86YN6 1023 aaKnown RBP21.41■■□□□ 1.02
CHRNA7-201ENST00000306901 DAXXQ9UER7 740 aaPredicted RBP21.24■□□□□ 0.99
CHRNA7-201ENST00000306901 NISCHQ9Y2I1 1504 aa21.23■□□□□ 0.99
CHRNA7-201ENST00000306901 TRIM41Q8WV44 630 aa21.21■□□□□ 0.99
CHRNA7-201ENST00000306901 UBTFP17480 764 aaKnown RBP21.13■□□□□ 0.97
CHRNA7-201ENST00000306901 HRCP23327 699 aa21.07■□□□□ 0.96
CHRNA7-201ENST00000306901 CNGB1Q14028 1251 aaPredicted RBP21.06■□□□□ 0.96
CHRNA7-201ENST00000306901 POLR3GLQ9BT43 218 aa21.05■□□□□ 0.96
CHRNA7-201ENST00000306901 TRIM26Q12899 539 aaPredicted RBP20.91■□□□□ 0.94
CHRNA7-201ENST00000306901 ITGAEP38570 1179 aa20.87■□□□□ 0.93
CHRNA7-201ENST00000306901 RTL5Q5HYW3 569 aaPredicted RBP20.87■□□□□ 0.93
CHRNA7-201ENST00000306901 ZNF316A6NFI3 1004 aaPredicted RBP20.8■□□□□ 0.92
CHRNA7-201ENST00000306901 BCANQ96GW7 911 aa20.73■□□□□ 0.91
CHRNA7-201ENST00000306901 HNRNPUL2Q1KMD3 747 aaKnown RBP20.68■□□□□ 0.9
CHRNA7-201ENST00000306901 CLSPNQ9HAW4 1339 aa20.65■□□□□ 0.9
CHRNA7-201ENST00000306901 LOC105371045A0A1W2PR82 267 aa20.62■□□□□ 0.89
CHRNA7-201ENST00000306901 DIEXFQ68CQ4 756 aaKnown RBP20.61■□□□□ 0.89
CHRNA7-201ENST00000306901 GTF3C3Q9Y5Q9 886 aa20.58■□□□□ 0.88
CHRNA7-201ENST00000306901 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.56■□□□□ 0.88
CHRNA7-201ENST00000306901 SLC4A1APQ9BWU0 796 aaKnown RBP20.51■□□□□ 0.87
CHRNA7-201ENST00000306901 MYT1LQ9UL68 1186 aa20.51■□□□□ 0.87
CHRNA7-201ENST00000306901 CHIC1Q5VXU3 224 aa20.5■□□□□ 0.87
CHRNA7-201ENST00000306901 CDK11AQ9UQ88 783 aaPredicted RBP20.29■□□□□ 0.84
CHRNA7-201ENST00000306901 EIF5BO60841 1220 aaKnown RBP20.28■□□□□ 0.84
CHRNA7-201ENST00000306901 BCL11AQ9H165 835 aa20.28■□□□□ 0.84
CHRNA7-201ENST00000306901 NEUROD1Q13562 356 aa20.2■□□□□ 0.82
CHRNA7-201ENST00000306901 NPM2Q86SE8 214 aaKnown RBP20.13■□□□□ 0.81
CHRNA7-201ENST00000306901 FAM50AQ14320 339 aaKnown RBP20.08■□□□□ 0.8
CHRNA7-201ENST00000306901 ACIN1Q9UKV3 1341 aaKnown RBP20.03■□□□□ 0.8
CHRNA7-201ENST00000306901 ANP32CO43423 234 aa20.03■□□□□ 0.8
CHRNA7-201ENST00000306901 TRIM52Q96A61 297 aa20.02■□□□□ 0.8
CHRNA7-201ENST00000306901 ZNF326Q5BKZ1 582 aaKnown RBP19.99■□□□□ 0.79
CHRNA7-201ENST00000306901 ANP32AP39687 249 aaKnown RBP19.97■□□□□ 0.79
CHRNA7-201ENST00000306901 ZBTB47Q9UFB7 747 aaPredicted RBP19.96■□□□□ 0.79
CHRNA7-201ENST00000306901 CANXP27824 592 aaKnown RBP19.95■□□□□ 0.78
CHRNA7-201ENST00000306901 SLC24A1O60721 1099 aa19.89■□□□□ 0.77
CHRNA7-201ENST00000306901 NBR1Q14596 966 aa19.87■□□□□ 0.77
CHRNA7-201ENST00000306901 FKBP8Q14318 412 aa19.83■□□□□ 0.77
CHRNA7-201ENST00000306901 ARXQ96QS3 562 aa19.83■□□□□ 0.77
CHRNA7-201ENST00000306901 GLIPR1L2Q4G1C9 344 aa19.75■□□□□ 0.75
CHRNA7-201ENST00000306901 ANP32BQ92688 251 aaKnown RBP19.71■□□□□ 0.75
CHRNA7-201ENST00000306901 HSP90AA1P07900 732 aaKnown RBP19.64■□□□□ 0.73
CHRNA7-201ENST00000306901 SALL2Q9Y467 1007 aaPredicted RBP19.55■□□□□ 0.72
CHRNA7-201ENST00000306901 SCAF1Q9H7N4 1312 aaKnown RBP19.53■□□□□ 0.72
CHRNA7-201ENST00000306901 HNRNPUQ00839 825 aaKnown RBP eCLIP19.5■□□□□ 0.71
CHRNA7-201ENST00000306901 FAM9BQ8IZU0 186 aa19.5■□□□□ 0.71
CHRNA7-201ENST00000306901 IRX6P78412 446 aaPredicted RBP19.49■□□□□ 0.71
CHRNA7-201ENST00000306901 NEFMP07197 916 aa19.46■□□□□ 0.71
CHRNA7-201ENST00000306901 ARID3CA6NKF2 412 aa19.44■□□□□ 0.7
CHRNA7-201ENST00000306901 UPF2Q9HAU5 1272 aaKnown RBP19.43■□□□□ 0.7
CHRNA7-201ENST00000306901 DDX10Q13206 875 aaKnown RBP19.39■□□□□ 0.69
CHRNA7-201ENST00000306901 CCDC136Q96JN2 1154 aa19.38■□□□□ 0.69
CHRNA7-201ENST00000306901 RTN4Q9NQC3 1192 aaKnown RBP19.35■□□□□ 0.69
CHRNA7-201ENST00000306901 P3H3Q8IVL6 736 aa19.35■□□□□ 0.69
CHRNA7-201ENST00000306901 ZNF777Q9ULD5 760 aaPredicted RBP19.23■□□□□ 0.67
CHRNA7-201ENST00000306901 MIER1Q8N108 512 aa19.2■□□□□ 0.66
CHRNA7-201ENST00000306901 FBLN2P98095 1184 aa19.19■□□□□ 0.66
CHRNA7-201ENST00000306901 ANP32EQ9BTT0 268 aa19.18■□□□□ 0.66
CHRNA7-201ENST00000306901 SENP3-EIF4A1A0A087X0R7 540 aa19.17■□□□□ 0.66
CHRNA7-201ENST00000306901 TPRNQ4KMQ1 711 aa19.17■□□□□ 0.66
CHRNA7-201ENST00000306901 TRIM44Q96DX7 344 aaPredicted RBP19.17■□□□□ 0.66
CHRNA7-201ENST00000306901 HIRIP3Q9BW71 556 aaPredicted RBP19.16■□□□□ 0.66
CHRNA7-201ENST00000306901 TONSLQ96HA7 1378 aa19.14■□□□□ 0.65
CHRNA7-201ENST00000306901 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.13■□□□□ 0.65
CHRNA7-201ENST00000306901 TMC1Q8TDI8 760 aa19.12■□□□□ 0.65
CHRNA7-201ENST00000306901 NAP1L5Q96NT1 182 aaPredicted RBP19.11■□□□□ 0.65
CHRNA7-201ENST00000306901 NCLP19338 710 aaKnown RBP19.1■□□□□ 0.65
CHRNA7-201ENST00000306901 AMER1Q5JTC6 1135 aaPredicted RBP19.09■□□□□ 0.65
CHRNA7-201ENST00000306901 CHGAP10645 457 aaKnown RBP19.09■□□□□ 0.65
CHRNA7-201ENST00000306901 MRS2Q9HD23 443 aa19.08■□□□□ 0.65
CHRNA7-201ENST00000306901 LAS1LQ9Y4W2 734 aaKnown RBP19.07■□□□□ 0.64
CHRNA7-201ENST00000306901 TNNT2P45379 298 aaPredicted RBP19.05■□□□□ 0.64
CHRNA7-201ENST00000306901 PLPPR3Q6T4P5 718 aa19.03■□□□□ 0.64
CHRNA7-201ENST00000306901 WDR43Q15061 677 aaKnown RBP eCLIP19.02■□□□□ 0.64
CHRNA7-201ENST00000306901 DNTTIP2Q5QJE6 756 aaKnown RBP19.02■□□□□ 0.64
CHRNA7-201ENST00000306901 PABPN1Q86U42 306 aaKnown RBP eCLIP19.01■□□□□ 0.63
CHRNA7-201ENST00000306901 DDRGK1Q96HY6 314 aa19.01■□□□□ 0.63
CHRNA7-201ENST00000306901 PTMAP06454 111 aaKnown RBP19.01■□□□□ 0.63
CHRNA7-201ENST00000306901 CDK11BP21127 795 aaKnown RBP18.98■□□□□ 0.63
CHRNA7-201ENST00000306901 BECN1Q14457 450 aa18.97■□□□□ 0.63
CHRNA7-201ENST00000306901 CHIC2Q9UKJ5 165 aa18.94■□□□□ 0.62
CHRNA7-201ENST00000306901 KDM2AQ9Y2K7 1162 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms