Protein–RNA interactions for Protein: O00629

KPNA4, Importin subunit alpha-3, humanhuman

Predicted RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4O00629 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
KPNA4O00629 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
KPNA4O00629 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.36■□□□□ 0.05
KPNA4O00629 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
KPNA4O00629 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
KPNA4O00629 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
KPNA4O00629 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
KPNA4O00629 LINC00895-201ENST00000629028 1637 ntBASIC15.36■□□□□ 0.05
KPNA4O00629 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
KPNA4O00629 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.36■□□□□ 0.05
KPNA4O00629 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
KPNA4O00629 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
KPNA4O00629 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.36■□□□□ 0.05
KPNA4O00629 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
KPNA4O00629 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.36■□□□□ 0.05
KPNA4O00629 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
KPNA4O00629 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
KPNA4O00629 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
KPNA4O00629 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
KPNA4O00629 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
KPNA4O00629 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.36■□□□□ 0.05
KPNA4O00629 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
KPNA4O00629 TSPY19P-201ENST00000418461 509 ntBASIC15.36■□□□□ 0.05
KPNA4O00629 TSPY18P-201ENST00000441642 509 ntBASIC15.36■□□□□ 0.05
KPNA4O00629 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.36■□□□□ 0.05
KPNA4O00629 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
KPNA4O00629 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
KPNA4O00629 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC15.36■□□□□ 0.05
KPNA4O00629 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.36■□□□□ 0.05
KPNA4O00629 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.36■□□□□ 0.05
KPNA4O00629 AL589182.2-201ENST00000619332 1049 ntBASIC15.36■□□□□ 0.05
KPNA4O00629 AC012313.10-201ENST00000623509 926 ntBASIC15.36■□□□□ 0.05
KPNA4O00629 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
KPNA4O00629 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
KPNA4O00629 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
KPNA4O00629 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.36■□□□□ 0.05
KPNA4O00629 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.36■□□□□ 0.05
KPNA4O00629 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.36■□□□□ 0.05
KPNA4O00629 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
KPNA4O00629 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
KPNA4O00629 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.36■□□□□ 0.05
KPNA4O00629 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
KPNA4O00629 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
KPNA4O00629 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
KPNA4O00629 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
KPNA4O00629 AL161772.1-201ENST00000610494 4412 ntBASIC15.36■□□□□ 0.05
KPNA4O00629 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
KPNA4O00629 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
KPNA4O00629 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.36■□□□□ 0.05
KPNA4O00629 MTHFR-217ENST00000641820 1569 ntBASIC15.36■□□□□ 0.05
KPNA4O00629 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
KPNA4O00629 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
KPNA4O00629 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
KPNA4O00629 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
KPNA4O00629 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
KPNA4O00629 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
KPNA4O00629 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
KPNA4O00629 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
KPNA4O00629 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
KPNA4O00629 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
KPNA4O00629 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
KPNA4O00629 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
KPNA4O00629 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
KPNA4O00629 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
KPNA4O00629 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
KPNA4O00629 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
KPNA4O00629 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
KPNA4O00629 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.35■□□□□ 0.05
KPNA4O00629 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
KPNA4O00629 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
KPNA4O00629 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
KPNA4O00629 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
KPNA4O00629 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
KPNA4O00629 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
KPNA4O00629 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
KPNA4O00629 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.35■□□□□ 0.05
KPNA4O00629 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.35■□□□□ 0.05
KPNA4O00629 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.35■□□□□ 0.05
KPNA4O00629 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
KPNA4O00629 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.35■□□□□ 0.05
KPNA4O00629 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC15.35■□□□□ 0.05
KPNA4O00629 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC15.35■□□□□ 0.05
KPNA4O00629 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC15.35■□□□□ 0.05
KPNA4O00629 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.35■□□□□ 0.05
KPNA4O00629 AC139887.3-201ENST00000568585 713 ntBASIC15.35■□□□□ 0.05
KPNA4O00629 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.35■□□□□ 0.05
KPNA4O00629 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
KPNA4O00629 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
KPNA4O00629 OR2I1P-210ENST00000642037 4691 ntBASIC15.35■□□□□ 0.05
KPNA4O00629 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
KPNA4O00629 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.35■□□□□ 0.05
KPNA4O00629 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
KPNA4O00629 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
KPNA4O00629 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.35■□□□□ 0.05
KPNA4O00629 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
KPNA4O00629 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
KPNA4O00629 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
KPNA4O00629 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
KPNA4O00629 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
KPNA4O00629 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms