RNA–Protein interactions for RNA: ENST00000440549.6

SLC39A6-202, Transcript of solute carrier family 39 member 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SLC39A6, Length 1,657 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A6-202ENST00000440549 NISCHQ9Y2I1 1504 aa35.66■■■■□ 3.3
SLC39A6-202ENST00000440549 ABCC9O60706 1549 aa32.6■■■□□ 2.81
SLC39A6-202ENST00000440549 CCDC180Q9P1Z9 1646 aa32.09■■■□□ 2.73
SLC39A6-202ENST00000440549 DNAJC5BQ9UF47 199 aa30.98■■■□□ 2.55
SLC39A6-202ENST00000440549 RB1CC1Q8TDY2 1594 aa30.73■■■□□ 2.51
SLC39A6-202ENST00000440549 NACADO15069 1562 aa30.4■■■□□ 2.46
SLC39A6-202ENST00000440549 DCAF8L2P0C7V8 631 aa30.33■■■□□ 2.45
SLC39A6-202ENST00000440549 PABPN1Q86U42 306 aaKnown RBP eCLIP30.33■■■□□ 2.45
SLC39A6-202ENST00000440549 UNC13AQ9UPW8 1703 aa30.17■■■□□ 2.42
SLC39A6-202ENST00000440549 BICRAQ9NZM4 1560 aa29.98■■■□□ 2.39
SLC39A6-202ENST00000440549 MYO15BQ96JP2 1530 aa29.8■■■□□ 2.36
SLC39A6-202ENST00000440549 ZCCHC6Q5VYS8 1495 aaKnown RBP29.49■■■□□ 2.31
SLC39A6-202ENST00000440549 CC2D2AQ9P2K1 1620 aa29.39■■■□□ 2.3
SLC39A6-202ENST00000440549 SCRIBQ14160 1630 aa29.37■■■□□ 2.29
SLC39A6-202ENST00000440549 CECR2Q9BXF3 1484 aa29.34■■■□□ 2.29
SLC39A6-202ENST00000440549 DCAF1Q9Y4B6 1507 aa29.33■■■□□ 2.29
SLC39A6-202ENST00000440549 SHROOM4Q9ULL8 1493 aa29.29■■■□□ 2.28
SLC39A6-202ENST00000440549 EIF4G1Q04637 1599 aaKnown RBP29.21■■■□□ 2.27
SLC39A6-202ENST00000440549 DNAJC5Q9H3Z4 198 aa28.54■■■□□ 2.16
SLC39A6-202ENST00000440549 NCAPD3P42695 1498 aa28.1■■■□□ 2.09
SLC39A6-202ENST00000440549 CUX2O14529 1486 aa28.09■■■□□ 2.09
SLC39A6-202ENST00000440549 ERCC6Q03468 1493 aa28.08■■■□□ 2.09
SLC39A6-202ENST00000440549 ATAD2BQ9ULI0 1458 aa28.02■■■□□ 2.08
SLC39A6-202ENST00000440549 NESP48681 1621 aa27.95■■■□□ 2.07
SLC39A6-202ENST00000440549 SMARCA4P51532 1647 aa27.92■■■□□ 2.06
SLC39A6-202ENST00000440549 HMGXB3Q12766 1538 aa27.86■■■□□ 2.05
SLC39A6-202ENST00000440549 SMARCA2P51531 1590 aa27.85■■■□□ 2.05
SLC39A6-202ENST00000440549 BAZ1BQ9UIG0 1483 aaKnown RBP27.71■■■□□ 2.03
SLC39A6-202ENST00000440549 THOC2Q8NI27 1593 aaKnown RBP27.66■■■□□ 2.02
SLC39A6-202ENST00000440549 BAZ1AQ9NRL2 1556 aaPredicted RBP27.66■■■□□ 2.02
SLC39A6-202ENST00000440549 PEG3Q9GZU2 1588 aa27.58■■■□□ 2
SLC39A6-202ENST00000440549 MROH2BQ7Z745 1585 aa27.56■■■□□ 2
SLC39A6-202ENST00000440549 KIF21AQ7Z4S6 1674 aa27.53■■■□□ 2
SLC39A6-202ENST00000440549 LAMC3Q9Y6N6 1575 aa27.51■■■□□ 2
SLC39A6-202ENST00000440549 PDS5BQ9NTI5 1447 aa27.34■■□□□ 1.97
SLC39A6-202ENST00000440549 CADPSQ9ULU8 1353 aa27.25■■□□□ 1.95
SLC39A6-202ENST00000440549 TRIM41Q8WV44 630 aa27.24■■□□□ 1.95
SLC39A6-202ENST00000440549 WIZO95785 1651 aa27.22■■□□□ 1.95
SLC39A6-202ENST00000440549 MRC2Q9UBG0 1479 aa27.2■■□□□ 1.94
SLC39A6-202ENST00000440549 WDR62O43379 1518 aa27.15■■□□□ 1.94
SLC39A6-202ENST00000440549 CEP164Q9UPV0 1460 aa27.02■■□□□ 1.92
SLC39A6-202ENST00000440549 FANCD2Q9BXW9 1451 aa26.98■■□□□ 1.91
SLC39A6-202ENST00000440549 CFTRP13569 1480 aa26.87■■□□□ 1.89
SLC39A6-202ENST00000440549 URB2Q14146 1524 aaKnown RBP26.84■■□□□ 1.89
SLC39A6-202ENST00000440549 RSF1Q96T23 1441 aaPredicted RBP26.81■■□□□ 1.88
SLC39A6-202ENST00000440549 TOP2AP11388 1531 aaKnown RBP26.77■■□□□ 1.88
SLC39A6-202ENST00000440549 OSCARQ8IYS5 282 aa26.76■■□□□ 1.87
SLC39A6-202ENST00000440549 ZNF608Q9ULD9 1512 aaPredicted RBP26.6■■□□□ 1.85
SLC39A6-202ENST00000440549 RIMBP3CA6NJZ7 1639 aa26.57■■□□□ 1.84
SLC39A6-202ENST00000440549 RIMBP3BA6NNM3 1639 aa26.57■■□□□ 1.84
SLC39A6-202ENST00000440549 RIMBP3Q9UFD9 1639 aa26.57■■□□□ 1.84
SLC39A6-202ENST00000440549 PRDM2Q13029 1718 aa26.56■■□□□ 1.84
SLC39A6-202ENST00000440549 CCDC88BA6NC98 1476 aa26.5■■□□□ 1.83
SLC39A6-202ENST00000440549 IFT140Q96RY7 1462 aa26.46■■□□□ 1.83
SLC39A6-202ENST00000440549 TOPBP1Q92547 1522 aa26.44■■□□□ 1.82
SLC39A6-202ENST00000440549 ARHGEF11O15085 1522 aa26.42■■□□□ 1.82
SLC39A6-202ENST00000440549 EIF4G3O43432 1585 aaKnown RBP26.39■■□□□ 1.81
SLC39A6-202ENST00000440549 AQRO60306 1485 aaKnown RBP eCLIP26.29■■□□□ 1.8
SLC39A6-202ENST00000440549 DNMBPQ6XZF7 1577 aa26.28■■□□□ 1.8
SLC39A6-202ENST00000440549 CHD1O14646 1710 aa26.27■■□□□ 1.8
SLC39A6-202ENST00000440549 CYB5RLQ6IPT4 315 aa26.25■■□□□ 1.79
SLC39A6-202ENST00000440549 TARBP1Q13395 1621 aaKnown RBP26.25■■□□□ 1.79
SLC39A6-202ENST00000440549 ABCC8Q09428 1581 aa26.2■■□□□ 1.78
SLC39A6-202ENST00000440549 PELP1Q8IZL8 1130 aaKnown RBP26.2■■□□□ 1.78
SLC39A6-202ENST00000440549 ARAP1Q96P48 1450 aa26.17■■□□□ 1.78
SLC39A6-202ENST00000440549 POLA1P09884 1462 aaPredicted RBP26.15■■□□□ 1.78
SLC39A6-202ENST00000440549 FBLN2P98095 1184 aa26.15■■□□□ 1.78
SLC39A6-202ENST00000440549 RAD54L2Q9Y4B4 1467 aa26.13■■□□□ 1.77
SLC39A6-202ENST00000440549 TDRD9Q8NDG6 1382 aaKnown RBP26.06■■□□□ 1.76
SLC39A6-202ENST00000440549 TRHP20396 242 aaPredicted RBP26.06■■□□□ 1.76
SLC39A6-202ENST00000440549 SOGA1O94964 1423 aa26■■□□□ 1.75
SLC39A6-202ENST00000440549 SNAPC4Q5SXM2 1469 aa25.98■■□□□ 1.75
SLC39A6-202ENST00000440549 FGD5Q6ZNL6 1462 aa25.96■■□□□ 1.75
SLC39A6-202ENST00000440549 CLASP1Q7Z460 1538 aa25.92■■□□□ 1.74
SLC39A6-202ENST00000440549 CUX1P39880 1505 aa25.9■■□□□ 1.74
SLC39A6-202ENST00000440549 MYT1Q01538 1121 aa25.83■■□□□ 1.73
SLC39A6-202ENST00000440549 CHMP7Q8WUX9 453 aaPredicted RBP25.83■■□□□ 1.73
SLC39A6-202ENST00000440549 SYNJ1O43426 1573 aa25.81■■□□□ 1.72
SLC39A6-202ENST00000440549 MAGI1Q96QZ7 1491 aaPredicted RBP25.8■■□□□ 1.72
SLC39A6-202ENST00000440549 GRIN2BQ13224 1484 aa25.79■■□□□ 1.72
SLC39A6-202ENST00000440549 WDR97A6NE52 1622 aa25.78■■□□□ 1.72
SLC39A6-202ENST00000440549 SYNJ2O15056 1496 aa25.74■■□□□ 1.71
SLC39A6-202ENST00000440549 PBRM1Q86U86 1689 aa25.73■■□□□ 1.71
SLC39A6-202ENST00000440549 GAPVD1Q14C86 1478 aa25.67■■□□□ 1.7
SLC39A6-202ENST00000440549 ERCC6L2Q5T890 1561 aa25.62■■□□□ 1.69
SLC39A6-202ENST00000440549 ABCA5Q8WWZ7 1642 aa25.62■■□□□ 1.69
SLC39A6-202ENST00000440549 ABCA10Q8WWZ4 1543 aa25.58■■□□□ 1.69
SLC39A6-202ENST00000440549 AEBP2Q6ZN18 517 aaPredicted RBP25.49■■□□□ 1.67
SLC39A6-202ENST00000440549 GRIN2AQ12879 1464 aa25.49■■□□□ 1.67
SLC39A6-202ENST00000440549 CEP170Q5SW79 1584 aa25.48■■□□□ 1.67
SLC39A6-202ENST00000440549 ADAMTS12P58397 1594 aa25.46■■□□□ 1.67
SLC39A6-202ENST00000440549 SUPT5HO00267 1087 aaKnown RBP25.42■■□□□ 1.66
SLC39A6-202ENST00000440549 NUP160Q12769 1436 aa25.4■■□□□ 1.66
SLC39A6-202ENST00000440549 WRNQ14191 1432 aaPredicted RBP eCLIP25.38■■□□□ 1.65
SLC39A6-202ENST00000440549 SHROOM2Q13796 1616 aa25.35■■□□□ 1.65
SLC39A6-202ENST00000440549 BIVM-ERCC5R4GMW8 1640 aa25.33■■□□□ 1.65
SLC39A6-202ENST00000440549 TOP2BQ02880 1626 aa25.32■■□□□ 1.64
SLC39A6-202ENST00000440549 FHAD1B1AJZ9 1412 aa25.3■■□□□ 1.64
SLC39A6-202ENST00000440549 KIF13AQ9H1H9 1805 aa25.25■■□□□ 1.63
SLC39A6-202ENST00000440549 ERICH3Q5RHP9 1530 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms