RNA–Protein interactions for RNA: ENST00000533608.5

EXT2-210, Transcript of exostosin glycosyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXT2, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT2-210ENST00000533608 NISCHQ9Y2I1 1504 aa33.83■■■■□ 3.01
EXT2-210ENST00000533608 SHROOM4Q9ULL8 1493 aa29.15■■■□□ 2.26
EXT2-210ENST00000533608 CCDC180Q9P1Z9 1646 aa28.65■■■□□ 2.18
EXT2-210ENST00000533608 DCAF8L2P0C7V8 631 aa28.61■■■□□ 2.17
EXT2-210ENST00000533608 ZCCHC6Q5VYS8 1495 aaKnown RBP28.55■■■□□ 2.16
EXT2-210ENST00000533608 SUPT5HO00267 1087 aaKnown RBP28.51■■■□□ 2.15
EXT2-210ENST00000533608 DCAF1Q9Y4B6 1507 aa27.56■■■□□ 2
EXT2-210ENST00000533608 CHIC1Q5VXU3 224 aa27.43■■□□□ 1.98
EXT2-210ENST00000533608 MYO15BQ96JP2 1530 aa27.28■■□□□ 1.96
EXT2-210ENST00000533608 SCRIBQ14160 1630 aa27.15■■□□□ 1.94
EXT2-210ENST00000533608 ABCC9O60706 1549 aa27.1■■□□□ 1.93
EXT2-210ENST00000533608 RSF1Q96T23 1441 aaPredicted RBP26.78■■□□□ 1.88
EXT2-210ENST00000533608 LOC105371045A0A1W2PR82 267 aa26.77■■□□□ 1.88
EXT2-210ENST00000533608 NACADO15069 1562 aa26.61■■□□□ 1.85
EXT2-210ENST00000533608 PCGF6Q9BYE7 350 aa26.57■■□□□ 1.84
EXT2-210ENST00000533608 CECR2Q9BXF3 1484 aa26.55■■□□□ 1.84
EXT2-210ENST00000533608 RB1CC1Q8TDY2 1594 aa26.51■■□□□ 1.83
EXT2-210ENST00000533608 TRIM41Q8WV44 630 aa26.44■■□□□ 1.82
EXT2-210ENST00000533608 FAM9AQ8IZU1 332 aaPredicted RBP26.42■■□□□ 1.82
EXT2-210ENST00000533608 MROH2BQ7Z745 1585 aa26.38■■□□□ 1.81
EXT2-210ENST00000533608 EHMT2Q96KQ7 1210 aa26.37■■□□□ 1.81
EXT2-210ENST00000533608 HRCP23327 699 aa26.27■■□□□ 1.8
EXT2-210ENST00000533608 WIZO95785 1651 aa26.22■■□□□ 1.79
EXT2-210ENST00000533608 PABPN1Q86U42 306 aaKnown RBP eCLIP26.01■■□□□ 1.75
EXT2-210ENST00000533608 PPARGC1BQ86YN6 1023 aaKnown RBP25.99■■□□□ 1.75
EXT2-210ENST00000533608 BAZ1AQ9NRL2 1556 aaPredicted RBP25.98■■□□□ 1.75
EXT2-210ENST00000533608 TRIM26Q12899 539 aaPredicted RBP25.92■■□□□ 1.74
EXT2-210ENST00000533608 UNC13AQ9UPW8 1703 aa25.84■■□□□ 1.73
EXT2-210ENST00000533608 SMARCA4P51532 1647 aa25.79■■□□□ 1.72
EXT2-210ENST00000533608 TOP2AP11388 1531 aaKnown RBP25.71■■□□□ 1.71
EXT2-210ENST00000533608 CCDC88BA6NC98 1476 aa25.7■■□□□ 1.71
EXT2-210ENST00000533608 ABCC8Q09428 1581 aa25.67■■□□□ 1.7
EXT2-210ENST00000533608 EIF4G1Q04637 1599 aaKnown RBP25.62■■□□□ 1.69
EXT2-210ENST00000533608 SMARCA2P51531 1590 aa25.59■■□□□ 1.69
EXT2-210ENST00000533608 BICRAQ9NZM4 1560 aa25.58■■□□□ 1.69
EXT2-210ENST00000533608 TTBK1Q5TCY1 1321 aaPredicted RBP25.44■■□□□ 1.66
EXT2-210ENST00000533608 SOGA1O94964 1423 aa25.41■■□□□ 1.66
EXT2-210ENST00000533608 RUSC2Q8N2Y8 1516 aa25.3■■□□□ 1.64
EXT2-210ENST00000533608 UBTFP17480 764 aaKnown RBP25.28■■□□□ 1.64
EXT2-210ENST00000533608 CSRNP3Q8WYN3 585 aa25.23■■□□□ 1.63
EXT2-210ENST00000533608 ATAD2BQ9ULI0 1458 aa25.22■■□□□ 1.63
EXT2-210ENST00000533608 WRNQ14191 1432 aaPredicted RBP eCLIP25.2■■□□□ 1.62
EXT2-210ENST00000533608 BAZ1BQ9UIG0 1483 aaKnown RBP25.19■■□□□ 1.62
EXT2-210ENST00000533608 CEP162Q5TB80 1403 aa25.17■■□□□ 1.62
EXT2-210ENST00000533608 ZEB1P37275 1124 aaPredicted RBP25.17■■□□□ 1.62
EXT2-210ENST00000533608 PEG3Q9GZU2 1588 aa25.16■■□□□ 1.62
EXT2-210ENST00000533608 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.12■■□□□ 1.61
EXT2-210ENST00000533608 TNIKQ9UKE5 1360 aa25.05■■□□□ 1.6
EXT2-210ENST00000533608 RANGAP1P46060 587 aaPredicted RBP25.05■■□□□ 1.6
EXT2-210ENST00000533608 SYNJ1O43426 1573 aa25.04■■□□□ 1.6
EXT2-210ENST00000533608 EEA1Q15075 1411 aa25.03■■□□□ 1.6
EXT2-210ENST00000533608 CCER1Q8TC90 406 aaPredicted RBP24.99■■□□□ 1.59
EXT2-210ENST00000533608 GOLGA3Q08378 1498 aa24.96■■□□□ 1.59
EXT2-210ENST00000533608 CEP164Q9UPV0 1460 aa24.82■■□□□ 1.56
EXT2-210ENST00000533608 RAPGEF2Q9Y4G8 1499 aa24.77■■□□□ 1.56
EXT2-210ENST00000533608 CLIP1P30622 1438 aa24.75■■□□□ 1.55
EXT2-210ENST00000533608 NCAPD3P42695 1498 aa24.69■■□□□ 1.54
EXT2-210ENST00000533608 KIF21BO75037 1637 aa24.68■■□□□ 1.54
EXT2-210ENST00000533608 HNRNPUL2Q1KMD3 747 aaKnown RBP24.67■■□□□ 1.54
EXT2-210ENST00000533608 TOP2BQ02880 1626 aa24.65■■□□□ 1.54
EXT2-210ENST00000533608 APLP2Q06481 763 aa24.63■■□□□ 1.53
EXT2-210ENST00000533608 HMGXB3Q12766 1538 aa24.61■■□□□ 1.53
EXT2-210ENST00000533608 VPS8Q8N3P4 1428 aa24.55■■□□□ 1.52
EXT2-210ENST00000533608 CUX1P39880 1505 aa24.55■■□□□ 1.52
EXT2-210ENST00000533608 BIVM-ERCC5R4GMW8 1640 aa24.5■■□□□ 1.51
EXT2-210ENST00000533608 CFTRP13569 1480 aa24.48■■□□□ 1.51
EXT2-210ENST00000533608 KIF27Q86VH2 1401 aa24.42■■□□□ 1.5
EXT2-210ENST00000533608 PRXQ9BXM0 1461 aa24.41■■□□□ 1.5
EXT2-210ENST00000533608 DIEXFQ68CQ4 756 aaKnown RBP24.34■■□□□ 1.49
EXT2-210ENST00000533608 KANK4Q5T7N3 995 aaPredicted RBP24.32■■□□□ 1.48
EXT2-210ENST00000533608 ERICH3Q5RHP9 1530 aa24.31■■□□□ 1.48
EXT2-210ENST00000533608 CADPSQ9ULU8 1353 aa24.31■■□□□ 1.48
EXT2-210ENST00000533608 ARAP1Q96P48 1450 aa24.3■■□□□ 1.48
EXT2-210ENST00000533608 CUX2O14529 1486 aa24.29■■□□□ 1.48
EXT2-210ENST00000533608 CC2D2AQ9P2K1 1620 aa24.24■■□□□ 1.47
EXT2-210ENST00000533608 FGD5Q6ZNL6 1462 aa24.18■■□□□ 1.46
EXT2-210ENST00000533608 IGF1RP08069 1367 aa24.18■■□□□ 1.46
EXT2-210ENST00000533608 SCAF1Q9H7N4 1312 aaKnown RBP24.17■■□□□ 1.46
EXT2-210ENST00000533608 ITGAEP38570 1179 aa24.17■■□□□ 1.46
EXT2-210ENST00000533608 ZNF316A6NFI3 1004 aaPredicted RBP24.14■■□□□ 1.46
EXT2-210ENST00000533608 ARHGAP35Q9NRY4 1499 aa24.14■■□□□ 1.45
EXT2-210ENST00000533608 P3H3Q8IVL6 736 aa24.13■■□□□ 1.45
EXT2-210ENST00000533608 CARMIL1Q5VZK9 1371 aa24.11■■□□□ 1.45
EXT2-210ENST00000533608 FANCD2Q9BXW9 1451 aa24.1■■□□□ 1.45
EXT2-210ENST00000533608 ATP1B4Q9UN42 357 aaPredicted RBP24.08■■□□□ 1.45
EXT2-210ENST00000533608 NESP48681 1621 aa24.08■■□□□ 1.45
EXT2-210ENST00000533608 PRDM2Q13029 1718 aa24.06■■□□□ 1.44
EXT2-210ENST00000533608 RAD54L2Q9Y4B4 1467 aa24.04■■□□□ 1.44
EXT2-210ENST00000533608 NEUROD1Q13562 356 aa24.03■■□□□ 1.44
EXT2-210ENST00000533608 DNAJC5BQ9UF47 199 aa23.97■■□□□ 1.43
EXT2-210ENST00000533608 YTHDC1Q96MU7 727 aaKnown RBP23.97■■□□□ 1.43
EXT2-210ENST00000533608 ACIN1Q9UKV3 1341 aaKnown RBP23.95■■□□□ 1.42
EXT2-210ENST00000533608 CCNB3Q8WWL7 1395 aa23.93■■□□□ 1.42
EXT2-210ENST00000533608 DHX57Q6P158 1386 aaKnown RBP23.92■■□□□ 1.42
EXT2-210ENST00000533608 POLA1P09884 1462 aaPredicted RBP23.9■■□□□ 1.42
EXT2-210ENST00000533608 RRBP1Q9P2E9 1410 aaKnown RBP23.89■■□□□ 1.41
EXT2-210ENST00000533608 TOPBP1Q92547 1522 aa23.88■■□□□ 1.41
EXT2-210ENST00000533608 MIER1Q8N108 512 aa23.87■■□□□ 1.41
EXT2-210ENST00000533608 CENPBP07199 599 aaPredicted RBP23.86■■□□□ 1.41
EXT2-210ENST00000533608 DNMBPQ6XZF7 1577 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms