RNA–Protein interactions for RNA: ENST00000216294.4

SNAPC1-201, Transcript of small nuclear RNA activating complex polypeptide 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC1, Length 2,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC1-201ENST00000216294 NISCHQ9Y2I1 1504 aa33.37■■■□□ 2.93
SNAPC1-201ENST00000216294 CCDC180Q9P1Z9 1646 aa28.71■■■□□ 2.19
SNAPC1-201ENST00000216294 ZCCHC6Q5VYS8 1495 aaKnown RBP28.12■■■□□ 2.09
SNAPC1-201ENST00000216294 SHROOM4Q9ULL8 1493 aa28.05■■■□□ 2.08
SNAPC1-201ENST00000216294 DCAF8L2P0C7V8 631 aa27.73■■■□□ 2.03
SNAPC1-201ENST00000216294 SUPT5HO00267 1087 aaKnown RBP27.58■■■□□ 2.01
SNAPC1-201ENST00000216294 DCAF1Q9Y4B6 1507 aa27.42■■□□□ 1.98
SNAPC1-201ENST00000216294 ABCC9O60706 1549 aa27.09■■□□□ 1.93
SNAPC1-201ENST00000216294 MYO15BQ96JP2 1530 aa26.88■■□□□ 1.89
SNAPC1-201ENST00000216294 SCRIBQ14160 1630 aa26.76■■□□□ 1.87
SNAPC1-201ENST00000216294 NACADO15069 1562 aa26.69■■□□□ 1.86
SNAPC1-201ENST00000216294 CHIC1Q5VXU3 224 aa26.67■■□□□ 1.86
SNAPC1-201ENST00000216294 RB1CC1Q8TDY2 1594 aa26.39■■□□□ 1.81
SNAPC1-201ENST00000216294 PCGF6Q9BYE7 350 aa26.35■■□□□ 1.81
SNAPC1-201ENST00000216294 HRCP23327 699 aa26.24■■□□□ 1.79
SNAPC1-201ENST00000216294 LOC105371045A0A1W2PR82 267 aa26.21■■□□□ 1.79
SNAPC1-201ENST00000216294 RSF1Q96T23 1441 aaPredicted RBP26.14■■□□□ 1.77
SNAPC1-201ENST00000216294 PPARGC1BQ86YN6 1023 aaKnown RBP26.12■■□□□ 1.77
SNAPC1-201ENST00000216294 CECR2Q9BXF3 1484 aa26.05■■□□□ 1.76
SNAPC1-201ENST00000216294 UNC13AQ9UPW8 1703 aa25.93■■□□□ 1.74
SNAPC1-201ENST00000216294 MROH2BQ7Z745 1585 aa25.9■■□□□ 1.74
SNAPC1-201ENST00000216294 PABPN1Q86U42 306 aaKnown RBP eCLIP25.74■■□□□ 1.71
SNAPC1-201ENST00000216294 WIZO95785 1651 aa25.71■■□□□ 1.71
SNAPC1-201ENST00000216294 BAZ1AQ9NRL2 1556 aaPredicted RBP25.69■■□□□ 1.7
SNAPC1-201ENST00000216294 BICRAQ9NZM4 1560 aa25.68■■□□□ 1.7
SNAPC1-201ENST00000216294 EHMT2Q96KQ7 1210 aa25.68■■□□□ 1.7
SNAPC1-201ENST00000216294 FAM9AQ8IZU1 332 aaPredicted RBP25.6■■□□□ 1.69
SNAPC1-201ENST00000216294 SMARCA4P51532 1647 aa25.55■■□□□ 1.68
SNAPC1-201ENST00000216294 TRIM26Q12899 539 aaPredicted RBP25.43■■□□□ 1.66
SNAPC1-201ENST00000216294 TRIM41Q8WV44 630 aa25.42■■□□□ 1.66
SNAPC1-201ENST00000216294 TOP2AP11388 1531 aaKnown RBP25.34■■□□□ 1.65
SNAPC1-201ENST00000216294 CCDC88BA6NC98 1476 aa25.19■■□□□ 1.62
SNAPC1-201ENST00000216294 SMARCA2P51531 1590 aa25.17■■□□□ 1.62
SNAPC1-201ENST00000216294 EIF4G1Q04637 1599 aaKnown RBP25.13■■□□□ 1.61
SNAPC1-201ENST00000216294 PEG3Q9GZU2 1588 aa25.12■■□□□ 1.61
SNAPC1-201ENST00000216294 ATAD2BQ9ULI0 1458 aa25.05■■□□□ 1.6
SNAPC1-201ENST00000216294 BAZ1BQ9UIG0 1483 aaKnown RBP24.95■■□□□ 1.58
SNAPC1-201ENST00000216294 ABCC8Q09428 1581 aa24.9■■□□□ 1.58
SNAPC1-201ENST00000216294 TTBK1Q5TCY1 1321 aaPredicted RBP24.85■■□□□ 1.57
SNAPC1-201ENST00000216294 ZEB1P37275 1124 aaPredicted RBP24.75■■□□□ 1.55
SNAPC1-201ENST00000216294 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.73■■□□□ 1.55
SNAPC1-201ENST00000216294 NCAPD3P42695 1498 aa24.69■■□□□ 1.54
SNAPC1-201ENST00000216294 HMGXB3Q12766 1538 aa24.65■■□□□ 1.54
SNAPC1-201ENST00000216294 WRNQ14191 1432 aaPredicted RBP eCLIP24.58■■□□□ 1.52
SNAPC1-201ENST00000216294 SCAF1Q9H7N4 1312 aaKnown RBP24.55■■□□□ 1.52
SNAPC1-201ENST00000216294 SOGA1O94964 1423 aa24.53■■□□□ 1.52
SNAPC1-201ENST00000216294 CCER1Q8TC90 406 aaPredicted RBP24.52■■□□□ 1.52
SNAPC1-201ENST00000216294 SYNJ1O43426 1573 aa24.49■■□□□ 1.51
SNAPC1-201ENST00000216294 RUSC2Q8N2Y8 1516 aa24.44■■□□□ 1.5
SNAPC1-201ENST00000216294 CC2D2AQ9P2K1 1620 aa24.41■■□□□ 1.5
SNAPC1-201ENST00000216294 EEA1Q15075 1411 aa24.32■■□□□ 1.48
SNAPC1-201ENST00000216294 CSRNP3Q8WYN3 585 aa24.31■■□□□ 1.48
SNAPC1-201ENST00000216294 CFTRP13569 1480 aa24.3■■□□□ 1.48
SNAPC1-201ENST00000216294 UBTFP17480 764 aaKnown RBP24.26■■□□□ 1.47
SNAPC1-201ENST00000216294 TOP2BQ02880 1626 aa24.25■■□□□ 1.47
SNAPC1-201ENST00000216294 CEP162Q5TB80 1403 aa24.24■■□□□ 1.47
SNAPC1-201ENST00000216294 NEUROD1Q13562 356 aa24.18■■□□□ 1.46
SNAPC1-201ENST00000216294 BIVM-ERCC5R4GMW8 1640 aa24.18■■□□□ 1.46
SNAPC1-201ENST00000216294 CUX1P39880 1505 aa24.17■■□□□ 1.46
SNAPC1-201ENST00000216294 CADPSQ9ULU8 1353 aa24.15■■□□□ 1.46
SNAPC1-201ENST00000216294 DIEXFQ68CQ4 756 aaKnown RBP24.13■■□□□ 1.45
SNAPC1-201ENST00000216294 TNIKQ9UKE5 1360 aa24.12■■□□□ 1.45
SNAPC1-201ENST00000216294 RANGAP1P46060 587 aaPredicted RBP24.12■■□□□ 1.45
SNAPC1-201ENST00000216294 GOLGA3Q08378 1498 aa24.12■■□□□ 1.45
SNAPC1-201ENST00000216294 PRDM2Q13029 1718 aa24.06■■□□□ 1.44
SNAPC1-201ENST00000216294 CEP164Q9UPV0 1460 aa24.06■■□□□ 1.44
SNAPC1-201ENST00000216294 ACIN1Q9UKV3 1341 aaKnown RBP24.04■■□□□ 1.44
SNAPC1-201ENST00000216294 KIF21BO75037 1637 aa24.02■■□□□ 1.44
SNAPC1-201ENST00000216294 HNRNPUL2Q1KMD3 747 aaKnown RBP24.01■■□□□ 1.43
SNAPC1-201ENST00000216294 RAPGEF2Q9Y4G8 1499 aa23.97■■□□□ 1.43
SNAPC1-201ENST00000216294 GTF3C3Q9Y5Q9 886 aa23.95■■□□□ 1.42
SNAPC1-201ENST00000216294 NESP48681 1621 aa23.94■■□□□ 1.42
SNAPC1-201ENST00000216294 DNAJC5BQ9UF47 199 aa23.94■■□□□ 1.42
SNAPC1-201ENST00000216294 FANCD2Q9BXW9 1451 aa23.92■■□□□ 1.42
SNAPC1-201ENST00000216294 YTHDC1Q96MU7 727 aaKnown RBP23.91■■□□□ 1.42
SNAPC1-201ENST00000216294 KIF27Q86VH2 1401 aa23.87■■□□□ 1.41
SNAPC1-201ENST00000216294 PRXQ9BXM0 1461 aa23.83■■□□□ 1.41
SNAPC1-201ENST00000216294 FGD5Q6ZNL6 1462 aa23.83■■□□□ 1.41
SNAPC1-201ENST00000216294 CLIP1P30622 1438 aa23.81■■□□□ 1.4
SNAPC1-201ENST00000216294 CUX2O14529 1486 aa23.79■■□□□ 1.4
SNAPC1-201ENST00000216294 ZNF316A6NFI3 1004 aaPredicted RBP23.78■■□□□ 1.4
SNAPC1-201ENST00000216294 ERICH3Q5RHP9 1530 aa23.76■■□□□ 1.39
SNAPC1-201ENST00000216294 LAMC3Q9Y6N6 1575 aa23.74■■□□□ 1.39
SNAPC1-201ENST00000216294 CENPBP07199 599 aaPredicted RBP23.73■■□□□ 1.39
SNAPC1-201ENST00000216294 PELP1Q8IZL8 1130 aaKnown RBP23.73■■□□□ 1.39
SNAPC1-201ENST00000216294 DNMBPQ6XZF7 1577 aa23.71■■□□□ 1.39
SNAPC1-201ENST00000216294 TOPBP1Q92547 1522 aa23.7■■□□□ 1.38
SNAPC1-201ENST00000216294 MIER1Q8N108 512 aa23.69■■□□□ 1.38
SNAPC1-201ENST00000216294 IGF1RP08069 1367 aa23.67■■□□□ 1.38
SNAPC1-201ENST00000216294 RAD54L2Q9Y4B4 1467 aa23.66■■□□□ 1.38
SNAPC1-201ENST00000216294 POLA1P09884 1462 aaPredicted RBP23.65■■□□□ 1.38
SNAPC1-201ENST00000216294 VPS8Q8N3P4 1428 aa23.63■■□□□ 1.37
SNAPC1-201ENST00000216294 URB2Q14146 1524 aaKnown RBP23.62■■□□□ 1.37
SNAPC1-201ENST00000216294 APLP2Q06481 763 aa23.61■■□□□ 1.37
SNAPC1-201ENST00000216294 PDS5BQ9NTI5 1447 aa23.6■■□□□ 1.37
SNAPC1-201ENST00000216294 CARMIL1Q5VZK9 1371 aa23.55■■□□□ 1.36
SNAPC1-201ENST00000216294 ABCA10Q8WWZ4 1543 aa23.55■■□□□ 1.36
SNAPC1-201ENST00000216294 KIF21AQ7Z4S6 1674 aa23.53■■□□□ 1.36
SNAPC1-201ENST00000216294 ARAP1Q96P48 1450 aa23.53■■□□□ 1.36
SNAPC1-201ENST00000216294 KANK4Q5T7N3 995 aaPredicted RBP23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 123.9 ms