RNA–Protein interactions for RNA: ENST00000420006.5

SNHG11-204, Transcript of small nucleolar RNA host gene 11, humanhuman

TSL 3 BASIC

Gene SNHG11, Length 720 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG11-204ENST00000420006 NISCHQ9Y2I1 1504 aa41.79■■■■■ 4.28
SNHG11-204ENST00000420006 CCDC180Q9P1Z9 1646 aa37.21■■■■□ 3.55
SNHG11-204ENST00000420006 ABCC9O60706 1549 aa36.18■■■■□ 3.38
SNHG11-204ENST00000420006 RB1CC1Q8TDY2 1594 aa34.93■■■■□ 3.18
SNHG11-204ENST00000420006 NACADO15069 1562 aa34.91■■■■□ 3.18
SNHG11-204ENST00000420006 ZCCHC6Q5VYS8 1495 aaKnown RBP34.86■■■■□ 3.17
SNHG11-204ENST00000420006 DCAF8L2P0C7V8 631 aa34.81■■■■□ 3.16
SNHG11-204ENST00000420006 MYO15BQ96JP2 1530 aa34.72■■■■□ 3.15
SNHG11-204ENST00000420006 DCAF1Q9Y4B6 1507 aa34.61■■■■□ 3.13
SNHG11-204ENST00000420006 UNC13AQ9UPW8 1703 aa34.15■■■■□ 3.06
SNHG11-204ENST00000420006 SCRIBQ14160 1630 aa33.92■■■■□ 3.02
SNHG11-204ENST00000420006 BICRAQ9NZM4 1560 aa33.79■■■■□ 3
SNHG11-204ENST00000420006 PABPN1Q86U42 306 aaKnown RBP eCLIP33.76■■■□□ 2.99
SNHG11-204ENST00000420006 SHROOM4Q9ULL8 1493 aa33.56■■■□□ 2.96
SNHG11-204ENST00000420006 DNAJC5BQ9UF47 199 aa32.96■■■□□ 2.87
SNHG11-204ENST00000420006 EIF4G1Q04637 1599 aaKnown RBP32.93■■■□□ 2.86
SNHG11-204ENST00000420006 CC2D2AQ9P2K1 1620 aa32.77■■■□□ 2.84
SNHG11-204ENST00000420006 CECR2Q9BXF3 1484 aa32.51■■■□□ 2.79
SNHG11-204ENST00000420006 SMARCA4P51532 1647 aa32.44■■■□□ 2.78
SNHG11-204ENST00000420006 BAZ1AQ9NRL2 1556 aaPredicted RBP32.44■■■□□ 2.78
SNHG11-204ENST00000420006 SMARCA2P51531 1590 aa32.23■■■□□ 2.75
SNHG11-204ENST00000420006 MROH2BQ7Z745 1585 aa32.19■■■□□ 2.74
SNHG11-204ENST00000420006 ATAD2BQ9ULI0 1458 aa32.18■■■□□ 2.74
SNHG11-204ENST00000420006 NCAPD3P42695 1498 aa32.14■■■□□ 2.74
SNHG11-204ENST00000420006 PEG3Q9GZU2 1588 aa32.11■■■□□ 2.73
SNHG11-204ENST00000420006 HMGXB3Q12766 1538 aa32.07■■■□□ 2.72
SNHG11-204ENST00000420006 BAZ1BQ9UIG0 1483 aaKnown RBP31.98■■■□□ 2.71
SNHG11-204ENST00000420006 WIZO95785 1651 aa31.89■■■□□ 2.7
SNHG11-204ENST00000420006 RSF1Q96T23 1441 aaPredicted RBP31.85■■■□□ 2.69
SNHG11-204ENST00000420006 TOP2AP11388 1531 aaKnown RBP31.59■■■□□ 2.65
SNHG11-204ENST00000420006 LAMC3Q9Y6N6 1575 aa31.35■■■□□ 2.61
SNHG11-204ENST00000420006 NESP48681 1621 aa31.32■■■□□ 2.6
SNHG11-204ENST00000420006 ERCC6Q03468 1493 aa31.25■■■□□ 2.59
SNHG11-204ENST00000420006 CADPSQ9ULU8 1353 aa31.21■■■□□ 2.59
SNHG11-204ENST00000420006 CCDC88BA6NC98 1476 aa31.14■■■□□ 2.57
SNHG11-204ENST00000420006 SUPT5HO00267 1087 aaKnown RBP31.12■■■□□ 2.57
SNHG11-204ENST00000420006 PDS5BQ9NTI5 1447 aa31.11■■■□□ 2.57
SNHG11-204ENST00000420006 CFTRP13569 1480 aa31.07■■■□□ 2.56
SNHG11-204ENST00000420006 KIF21AQ7Z4S6 1674 aa31.05■■■□□ 2.56
SNHG11-204ENST00000420006 PRDM2Q13029 1718 aa30.99■■■□□ 2.55
SNHG11-204ENST00000420006 THOC2Q8NI27 1593 aaKnown RBP30.9■■■□□ 2.54
SNHG11-204ENST00000420006 FANCD2Q9BXW9 1451 aa30.89■■■□□ 2.54
SNHG11-204ENST00000420006 CEP164Q9UPV0 1460 aa30.88■■■□□ 2.53
SNHG11-204ENST00000420006 CUX2O14529 1486 aa30.86■■■□□ 2.53
SNHG11-204ENST00000420006 MRC2Q9UBG0 1479 aa30.79■■■□□ 2.52
SNHG11-204ENST00000420006 WDR62O43379 1518 aa30.68■■■□□ 2.5
SNHG11-204ENST00000420006 URB2Q14146 1524 aaKnown RBP30.55■■■□□ 2.48
SNHG11-204ENST00000420006 ABCC8Q09428 1581 aa30.45■■■□□ 2.46
SNHG11-204ENST00000420006 DNMBPQ6XZF7 1577 aa30.42■■■□□ 2.46
SNHG11-204ENST00000420006 TOPBP1Q92547 1522 aa30.41■■■□□ 2.46
SNHG11-204ENST00000420006 CUX1P39880 1505 aa30.22■■■□□ 2.43
SNHG11-204ENST00000420006 IFT140Q96RY7 1462 aa30.2■■■□□ 2.43
SNHG11-204ENST00000420006 POLA1P09884 1462 aaPredicted RBP30.15■■■□□ 2.42
SNHG11-204ENST00000420006 DNAJC5Q9H3Z4 198 aa30.12■■■□□ 2.41
SNHG11-204ENST00000420006 FGD5Q6ZNL6 1462 aa30.1■■■□□ 2.41
SNHG11-204ENST00000420006 WRNQ14191 1432 aaPredicted RBP eCLIP30.07■■■□□ 2.4
SNHG11-204ENST00000420006 TARBP1Q13395 1621 aaKnown RBP30.07■■■□□ 2.4
SNHG11-204ENST00000420006 BIVM-ERCC5R4GMW8 1640 aa30.04■■■□□ 2.4
SNHG11-204ENST00000420006 TOP2BQ02880 1626 aa30.03■■■□□ 2.4
SNHG11-204ENST00000420006 SOGA1O94964 1423 aa30■■■□□ 2.39
SNHG11-204ENST00000420006 ZNF608Q9ULD9 1512 aaPredicted RBP30■■■□□ 2.39
SNHG11-204ENST00000420006 SYNJ1O43426 1573 aa29.99■■■□□ 2.39
SNHG11-204ENST00000420006 RAD54L2Q9Y4B4 1467 aa29.99■■■□□ 2.39
SNHG11-204ENST00000420006 EIF4G3O43432 1585 aaKnown RBP29.98■■■□□ 2.39
SNHG11-204ENST00000420006 WDR97A6NE52 1622 aa29.93■■■□□ 2.38
SNHG11-204ENST00000420006 AQRO60306 1485 aaKnown RBP eCLIP29.83■■■□□ 2.371e-6■■■■■ 33.8
SNHG11-204ENST00000420006 ABCA10Q8WWZ4 1543 aa29.82■■■□□ 2.36
SNHG11-204ENST00000420006 TDRD9Q8NDG6 1382 aaKnown RBP29.8■■■□□ 2.36
SNHG11-204ENST00000420006 ABCA5Q8WWZ7 1642 aa29.72■■■□□ 2.35
SNHG11-204ENST00000420006 PBRM1Q86U86 1689 aa29.7■■■□□ 2.35
SNHG11-204ENST00000420006 GAPVD1Q14C86 1478 aa29.69■■■□□ 2.34
SNHG11-204ENST00000420006 GRIN2BQ13224 1484 aa29.68■■■□□ 2.34
SNHG11-204ENST00000420006 SNAPC4Q5SXM2 1469 aa29.63■■■□□ 2.33
SNHG11-204ENST00000420006 MAGI1Q96QZ7 1491 aaPredicted RBP29.61■■■□□ 2.33
SNHG11-204ENST00000420006 CHD1O14646 1710 aa29.59■■■□□ 2.33
SNHG11-204ENST00000420006 OSCARQ8IYS5 282 aa29.53■■■□□ 2.32
SNHG11-204ENST00000420006 ERICH3Q5RHP9 1530 aa29.5■■■□□ 2.31
SNHG11-204ENST00000420006 SYNJ2O15056 1496 aa29.48■■■□□ 2.31
SNHG11-204ENST00000420006 FBLN2P98095 1184 aa29.48■■■□□ 2.31
SNHG11-204ENST00000420006 KIF27Q86VH2 1401 aa29.45■■■□□ 2.31
SNHG11-204ENST00000420006 ADAMTS12P58397 1594 aa29.44■■■□□ 2.3
SNHG11-204ENST00000420006 CHMP7Q8WUX9 453 aaPredicted RBP29.42■■■□□ 2.3
SNHG11-204ENST00000420006 TRIM41Q8WV44 630 aa29.41■■■□□ 2.3
SNHG11-204ENST00000420006 FHAD1B1AJZ9 1412 aa29.36■■■□□ 2.29
SNHG11-204ENST00000420006 GRIN2AQ12879 1464 aa29.3■■■□□ 2.28
SNHG11-204ENST00000420006 CUL7Q14999 1698 aa29.3■■■□□ 2.28
SNHG11-204ENST00000420006 IGF1RP08069 1367 aa29.23■■■□□ 2.27
SNHG11-204ENST00000420006 CLASP1Q7Z460 1538 aa29.22■■■□□ 2.27
SNHG11-204ENST00000420006 NUP160Q12769 1436 aa29.15■■■□□ 2.26
SNHG11-204ENST00000420006 CEP170Q5SW79 1584 aa29.14■■■□□ 2.26
SNHG11-204ENST00000420006 RUSC2Q8N2Y8 1516 aa29.12■■■□□ 2.25
SNHG11-204ENST00000420006 CARMIL1Q5VZK9 1371 aa29.11■■■□□ 2.25
SNHG11-204ENST00000420006 ARHGEF11O15085 1522 aa29.1■■■□□ 2.25
SNHG11-204ENST00000420006 RIMBP3CA6NJZ7 1639 aa29.1■■■□□ 2.25
SNHG11-204ENST00000420006 RIMBP3BA6NNM3 1639 aa29.1■■■□□ 2.25
SNHG11-204ENST00000420006 RIMBP3Q9UFD9 1639 aa29.1■■■□□ 2.25
SNHG11-204ENST00000420006 CHIC1Q5VXU3 224 aa29.08■■■□□ 2.25
SNHG11-204ENST00000420006 EEA1Q15075 1411 aa28.99■■■□□ 2.23
SNHG11-204ENST00000420006 RAPGEF2Q9Y4G8 1499 aa28.98■■■□□ 2.23
SNHG11-204ENST00000420006 SHROOM2Q13796 1616 aa28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms