RNA–Protein interactions for RNA: ENST00000474315.5

IDH3B-206, Transcript of isocitrate dehydrogenase 3 (NAD(+)) beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene IDH3B, Length 1,279 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3B-206ENST00000474315 NISCHQ9Y2I1 1504 aa41.08■■■■■ 4.17
IDH3B-206ENST00000474315 CCDC180Q9P1Z9 1646 aa36.44■■■■□ 3.42
IDH3B-206ENST00000474315 ABCC9O60706 1549 aa35.32■■■■□ 3.24
IDH3B-206ENST00000474315 ZCCHC6Q5VYS8 1495 aaKnown RBP34.27■■■■□ 3.08
IDH3B-206ENST00000474315 DCAF8L2P0C7V8 631 aa34.27■■■■□ 3.08
IDH3B-206ENST00000474315 NACADO15069 1562 aa34.26■■■■□ 3.07
IDH3B-206ENST00000474315 RB1CC1Q8TDY2 1594 aa34.22■■■■□ 3.07
IDH3B-206ENST00000474315 MYO15BQ96JP2 1530 aa34.19■■■■□ 3.06
IDH3B-206ENST00000474315 DCAF1Q9Y4B6 1507 aa34.1■■■■□ 3.05
IDH3B-206ENST00000474315 SCRIBQ14160 1630 aa33.17■■■□□ 2.9
IDH3B-206ENST00000474315 UNC13AQ9UPW8 1703 aa33.16■■■□□ 2.9
IDH3B-206ENST00000474315 PABPN1Q86U42 306 aaKnown RBP eCLIP33.04■■■□□ 2.88
IDH3B-206ENST00000474315 SHROOM4Q9ULL8 1493 aa32.98■■■□□ 2.87
IDH3B-206ENST00000474315 BICRAQ9NZM4 1560 aa32.97■■■□□ 2.87
IDH3B-206ENST00000474315 DNAJC5BQ9UF47 199 aa32.56■■■□□ 2.8
IDH3B-206ENST00000474315 EIF4G1Q04637 1599 aaKnown RBP32.19■■■□□ 2.74
IDH3B-206ENST00000474315 CC2D2AQ9P2K1 1620 aa31.95■■■□□ 2.71
IDH3B-206ENST00000474315 BAZ1AQ9NRL2 1556 aaPredicted RBP31.9■■■□□ 2.7
IDH3B-206ENST00000474315 CECR2Q9BXF3 1484 aa31.85■■■□□ 2.69
IDH3B-206ENST00000474315 SMARCA4P51532 1647 aa31.79■■■□□ 2.68
IDH3B-206ENST00000474315 SMARCA2P51531 1590 aa31.67■■■□□ 2.66
IDH3B-206ENST00000474315 ATAD2BQ9ULI0 1458 aa31.59■■■□□ 2.65
IDH3B-206ENST00000474315 MROH2BQ7Z745 1585 aa31.58■■■□□ 2.65
IDH3B-206ENST00000474315 NCAPD3P42695 1498 aa31.58■■■□□ 2.65
IDH3B-206ENST00000474315 PEG3Q9GZU2 1588 aa31.53■■■□□ 2.64
IDH3B-206ENST00000474315 HMGXB3Q12766 1538 aa31.46■■■□□ 2.63
IDH3B-206ENST00000474315 BAZ1BQ9UIG0 1483 aaKnown RBP31.4■■■□□ 2.62
IDH3B-206ENST00000474315 RSF1Q96T23 1441 aaPredicted RBP31.39■■■□□ 2.62
IDH3B-206ENST00000474315 WIZO95785 1651 aa31.22■■■□□ 2.59
IDH3B-206ENST00000474315 TOP2AP11388 1531 aaKnown RBP31.04■■■□□ 2.56
IDH3B-206ENST00000474315 SUPT5HO00267 1087 aaKnown RBP30.82■■■□□ 2.52
IDH3B-206ENST00000474315 LAMC3Q9Y6N6 1575 aa30.71■■■□□ 2.51
IDH3B-206ENST00000474315 CADPSQ9ULU8 1353 aa30.69■■■□□ 2.5
IDH3B-206ENST00000474315 CCDC88BA6NC98 1476 aa30.63■■■□□ 2.49
IDH3B-206ENST00000474315 PDS5BQ9NTI5 1447 aa30.59■■■□□ 2.49
IDH3B-206ENST00000474315 ERCC6Q03468 1493 aa30.57■■■□□ 2.48
IDH3B-206ENST00000474315 NESP48681 1621 aa30.57■■■□□ 2.48
IDH3B-206ENST00000474315 CFTRP13569 1480 aa30.54■■■□□ 2.48
IDH3B-206ENST00000474315 FANCD2Q9BXW9 1451 aa30.31■■■□□ 2.44
IDH3B-206ENST00000474315 CEP164Q9UPV0 1460 aa30.28■■■□□ 2.44
IDH3B-206ENST00000474315 PRDM2Q13029 1718 aa30.23■■■□□ 2.43
IDH3B-206ENST00000474315 KIF21AQ7Z4S6 1674 aa30.21■■■□□ 2.43
IDH3B-206ENST00000474315 CUX2O14529 1486 aa30.19■■■□□ 2.42
IDH3B-206ENST00000474315 MRC2Q9UBG0 1479 aa30.17■■■□□ 2.42
IDH3B-206ENST00000474315 THOC2Q8NI27 1593 aaKnown RBP30.09■■■□□ 2.41
IDH3B-206ENST00000474315 WDR62O43379 1518 aa30.01■■■□□ 2.4
IDH3B-206ENST00000474315 ABCC8Q09428 1581 aa30.01■■■□□ 2.39
IDH3B-206ENST00000474315 URB2Q14146 1524 aaKnown RBP29.9■■■□□ 2.38
IDH3B-206ENST00000474315 DNMBPQ6XZF7 1577 aa29.84■■■□□ 2.37
IDH3B-206ENST00000474315 TOPBP1Q92547 1522 aa29.81■■■□□ 2.36
IDH3B-206ENST00000474315 WRNQ14191 1432 aaPredicted RBP eCLIP29.67■■■□□ 2.34
IDH3B-206ENST00000474315 IFT140Q96RY7 1462 aa29.66■■■□□ 2.34
IDH3B-206ENST00000474315 CUX1P39880 1505 aa29.64■■■□□ 2.34
IDH3B-206ENST00000474315 POLA1P09884 1462 aaPredicted RBP29.58■■■□□ 2.33
IDH3B-206ENST00000474315 DNAJC5Q9H3Z4 198 aa29.55■■■□□ 2.32
IDH3B-206ENST00000474315 FGD5Q6ZNL6 1462 aa29.54■■■□□ 2.32
IDH3B-206ENST00000474315 SOGA1O94964 1423 aa29.52■■■□□ 2.32
IDH3B-206ENST00000474315 TOP2BQ02880 1626 aa29.52■■■□□ 2.32
IDH3B-206ENST00000474315 BIVM-ERCC5R4GMW8 1640 aa29.47■■■□□ 2.31
IDH3B-206ENST00000474315 SYNJ1O43426 1573 aa29.43■■■□□ 2.3
IDH3B-206ENST00000474315 TARBP1Q13395 1621 aaKnown RBP29.41■■■□□ 2.3
IDH3B-206ENST00000474315 WDR97A6NE52 1622 aa29.39■■■□□ 2.3
IDH3B-206ENST00000474315 RAD54L2Q9Y4B4 1467 aa29.38■■■□□ 2.29
IDH3B-206ENST00000474315 ZNF608Q9ULD9 1512 aaPredicted RBP29.33■■■□□ 2.29
IDH3B-206ENST00000474315 ABCA10Q8WWZ4 1543 aa29.32■■■□□ 2.28
IDH3B-206ENST00000474315 TDRD9Q8NDG6 1382 aaKnown RBP29.26■■■□□ 2.28
IDH3B-206ENST00000474315 EIF4G3O43432 1585 aaKnown RBP29.26■■■□□ 2.28
IDH3B-206ENST00000474315 AQRO60306 1485 aaKnown RBP eCLIP29.24■■■□□ 2.278e-7■■■■■ 26.8
IDH3B-206ENST00000474315 TRIM41Q8WV44 630 aa29.21■■■□□ 2.27
IDH3B-206ENST00000474315 GAPVD1Q14C86 1478 aa29.19■■■□□ 2.26
IDH3B-206ENST00000474315 GRIN2BQ13224 1484 aa29.17■■■□□ 2.26
IDH3B-206ENST00000474315 ABCA5Q8WWZ7 1642 aa29.1■■■□□ 2.25
IDH3B-206ENST00000474315 KIF27Q86VH2 1401 aa29.09■■■□□ 2.25
IDH3B-206ENST00000474315 MAGI1Q96QZ7 1491 aaPredicted RBP29.09■■■□□ 2.25
IDH3B-206ENST00000474315 ERICH3Q5RHP9 1530 aa29.01■■■□□ 2.23
IDH3B-206ENST00000474315 SNAPC4Q5SXM2 1469 aa29.01■■■□□ 2.23
IDH3B-206ENST00000474315 OSCARQ8IYS5 282 aa28.98■■■□□ 2.23
IDH3B-206ENST00000474315 PBRM1Q86U86 1689 aa28.98■■■□□ 2.23
IDH3B-206ENST00000474315 CHMP7Q8WUX9 453 aaPredicted RBP28.97■■■□□ 2.23
IDH3B-206ENST00000474315 FBLN2P98095 1184 aa28.95■■■□□ 2.22
IDH3B-206ENST00000474315 SYNJ2O15056 1496 aa28.95■■■□□ 2.22
IDH3B-206ENST00000474315 FHAD1B1AJZ9 1412 aa28.9■■■□□ 2.22
IDH3B-206ENST00000474315 CHIC1Q5VXU3 224 aa28.89■■■□□ 2.22
IDH3B-206ENST00000474315 IGF1RP08069 1367 aa28.83■■■□□ 2.21
IDH3B-206ENST00000474315 ADAMTS12P58397 1594 aa28.82■■■□□ 2.2
IDH3B-206ENST00000474315 CUL7Q14999 1698 aa28.79■■■□□ 2.2
IDH3B-206ENST00000474315 EEA1Q15075 1411 aa28.77■■■□□ 2.2
IDH3B-206ENST00000474315 CHD1O14646 1710 aa28.77■■■□□ 2.2
IDH3B-206ENST00000474315 GRIN2AQ12879 1464 aa28.75■■■□□ 2.19
IDH3B-206ENST00000474315 CARMIL1Q5VZK9 1371 aa28.72■■■□□ 2.19
IDH3B-206ENST00000474315 RUSC2Q8N2Y8 1516 aa28.62■■■□□ 2.17
IDH3B-206ENST00000474315 NUP160Q12769 1436 aa28.6■■■□□ 2.17
IDH3B-206ENST00000474315 CSRNP3Q8WYN3 585 aa28.6■■■□□ 2.17
IDH3B-206ENST00000474315 RAPGEF2Q9Y4G8 1499 aa28.59■■■□□ 2.17
IDH3B-206ENST00000474315 CLASP1Q7Z460 1538 aa28.54■■■□□ 2.16
IDH3B-206ENST00000474315 CEP170Q5SW79 1584 aa28.5■■■□□ 2.15
IDH3B-206ENST00000474315 PRXQ9BXM0 1461 aa28.49■■■□□ 2.15
IDH3B-206ENST00000474315 RIMBP3CA6NJZ7 1639 aa28.47■■■□□ 2.15
IDH3B-206ENST00000474315 RIMBP3BA6NNM3 1639 aa28.47■■■□□ 2.15
IDH3B-206ENST00000474315 RIMBP3Q9UFD9 1639 aa28.47■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms